RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 C6orf132Q5T0Z8 1188 aa9.6□□□□□ -0.87
MDM2-229ENST00000543046 LMOD2Q6P5Q4 547 aa9.59□□□□□ -0.87
MDM2-229ENST00000543046 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
MDM2-229ENST00000543046 KCNK17Q96T54 332 aa9.59□□□□□ -0.87
MDM2-229ENST00000543046 ARHGAP33O14559 1287 aa9.58□□□□□ -0.88
MDM2-229ENST00000543046 PBX2P40425 430 aa9.58□□□□□ -0.88
MDM2-229ENST00000543046 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
MDM2-229ENST00000543046 AXIN2Q9Y2T1 843 aa9.58□□□□□ -0.88
MDM2-229ENST00000543046 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
MDM2-229ENST00000543046 KCNH8Q96L42 1107 aa9.57□□□□□ -0.88
MDM2-229ENST00000543046 PSEN2P49810 448 aa9.56□□□□□ -0.88
MDM2-229ENST00000543046 GPIHBP1Q8IV16 184 aa9.55□□□□□ -0.88
MDM2-229ENST00000543046 PPP1R3GB7ZBB8 358 aa9.54□□□□□ -0.88
MDM2-229ENST00000543046 COL9A1P20849 921 aa9.54□□□□□ -0.88
MDM2-229ENST00000543046 CDAN1Q8IWY9 1227 aa9.54□□□□□ -0.88
MDM2-229ENST00000543046 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
MDM2-229ENST00000543046 PTGDRQ13258 359 aa9.52□□□□□ -0.89
MDM2-229ENST00000543046 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.89
MDM2-229ENST00000543046 CERKQ8TCT0 537 aa9.52□□□□□ -0.89
MDM2-229ENST00000543046 FCHSD2O94868 740 aa9.51□□□□□ -0.89
MDM2-229ENST00000543046 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
MDM2-229ENST00000543046 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
MDM2-229ENST00000543046 GPR37O15354 613 aa9.5□□□□□ -0.89
MDM2-229ENST00000543046 LSM11P83369 360 aaKnown RBP eCLIP9.5□□□□□ -0.89
MDM2-229ENST00000543046 ZBED2Q9BTP6 218 aa9.49□□□□□ -0.89
MDM2-229ENST00000543046 HIC1Q14526 733 aa9.48□□□□□ -0.89
MDM2-229ENST00000543046 PRSS12P56730 875 aa9.47□□□□□ -0.89
MDM2-229ENST00000543046 PROX2Q3B8N5 592 aa9.47□□□□□ -0.89
MDM2-229ENST00000543046 ZC3H15Q8WU90 426 aaKnown RBP9.47□□□□□ -0.89
MDM2-229ENST00000543046 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
MDM2-229ENST00000543046 SLC4A5Q9BY07 1137 aa9.47□□□□□ -0.89
MDM2-229ENST00000543046 GNPATO15228 680 aa9.46□□□□□ -0.9
MDM2-229ENST00000543046 ANKRD13DQ6ZTN6 518 aa9.46□□□□□ -0.9
MDM2-229ENST00000543046 PCDH10Q9P2E7 1040 aa9.46□□□□□ -0.9
MDM2-229ENST00000543046 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
MDM2-229ENST00000543046 TK2O00142 265 aa9.45□□□□□ -0.9
MDM2-229ENST00000543046 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
MDM2-229ENST00000543046 RBM27Q9P2N5 1060 aaKnown RBP9.45□□□□□ -0.9
MDM2-229ENST00000543046 VPS9D1Q9Y2B5 631 aa9.45□□□□□ -0.9
MDM2-229ENST00000543046 ADGRD1Q6QNK2 874 aa9.44□□□□□ -0.9
MDM2-229ENST00000543046 TSKSQ9UJT2 592 aa9.44□□□□□ -0.9
MDM2-229ENST00000543046 ONECUT3O60422 494 aaPredicted RBP9.43□□□□□ -0.9
MDM2-229ENST00000543046 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
MDM2-229ENST00000543046 ZMYND10O75800 440 aa9.42□□□□□ -0.9
MDM2-229ENST00000543046 FECHP22830 423 aa9.42□□□□□ -0.9
MDM2-229ENST00000543046 FAM198AQ9UFP1 575 aa9.42□□□□□ -0.9
MDM2-229ENST00000543046 KIAA1468Q9P260 1216 aa9.41□□□□□ -0.9
MDM2-229ENST00000543046 RABGEF1Q9UJ41 708 aa9.41□□□□□ -0.9
MDM2-229ENST00000543046 PACS2Q86VP3 889 aa9.4□□□□□ -0.9
MDM2-229ENST00000543046 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
MDM2-229ENST00000543046 BHMG1C9JSJ3 638 aaPredicted RBP9.38□□□□□ -0.91
MDM2-229ENST00000543046 HRO43593 1189 aa9.38□□□□□ -0.91
MDM2-229ENST00000543046 TPRNQ4KMQ1 711 aa9.38□□□□□ -0.91
MDM2-229ENST00000543046 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
MDM2-229ENST00000543046 MAP2K5Q13163 448 aa9.37□□□□□ -0.91
MDM2-229ENST00000543046 NBPF3Q9H094 633 aa9.37□□□□□ -0.91
MDM2-229ENST00000543046 C3orf80F5H4A9 247 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 NUDT18Q6ZVK8 323 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
MDM2-229ENST00000543046 TATDN2Q93075 761 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 PNMA3Q9UL41 463 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 ADGRG1Q9Y653 693 aa9.36□□□□□ -0.91
MDM2-229ENST00000543046 MINK1Q8N4C8 1332 aaPredicted RBP9.35□□□□□ -0.91
MDM2-229ENST00000543046 SMAPO00193 183 aa9.35□□□□□ -0.91
MDM2-229ENST00000543046 SEPT9Q9UHD8 586 aaPredicted RBP9.35□□□□□ -0.91
MDM2-229ENST00000543046 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
MDM2-229ENST00000543046 IRF6O14896 467 aa9.33□□□□□ -0.92
MDM2-229ENST00000543046 MRPL50Q8N5N7 158 aaKnown RBP9.33□□□□□ -0.92
MDM2-229ENST00000543046 OATP04181 439 aa9.32□□□□□ -0.92
MDM2-229ENST00000543046 LAPTM4BQ86VI4 370 aa9.32□□□□□ -0.92
MDM2-229ENST00000543046 RBM46Q8TBY0 533 aaKnown RBP9.32□□□□□ -0.92
MDM2-229ENST00000543046 CCDC102AQ96A19 550 aa9.32□□□□□ -0.92
MDM2-229ENST00000543046 EYA1Q99502 592 aa9.32□□□□□ -0.92
MDM2-229ENST00000543046 FAM98CQ17RN3 349 aaKnown RBP9.31□□□□□ -0.92
MDM2-229ENST00000543046 METTL3Q86U44 580 aaKnown RBP9.31□□□□□ -0.92
MDM2-229ENST00000543046 SLC24A3Q9HC58 644 aa9.31□□□□□ -0.92
MDM2-229ENST00000543046 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
MDM2-229ENST00000543046 PXYLP1Q8TE99 480 aa9.3□□□□□ -0.92
MDM2-229ENST00000543046 PRKCSHP14314 528 aaPredicted RBP9.29□□□□□ -0.92
MDM2-229ENST00000543046 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
MDM2-229ENST00000543046 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
MDM2-229ENST00000543046 ZFRQ96KR1 1074 aaKnown RBP9.27□□□□□ -0.93
MDM2-229ENST00000543046 AK7Q96M32 723 aa9.27□□□□□ -0.93
MDM2-229ENST00000543046 PHOX2BQ99453 314 aa9.27□□□□□ -0.93
MDM2-229ENST00000543046 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.26□□□□□ -0.93
MDM2-229ENST00000543046 DNAJB2P25686 324 aa9.26□□□□□ -0.93
MDM2-229ENST00000543046 MYT1LQ9UL68 1186 aa9.26□□□□□ -0.93
MDM2-229ENST00000543046 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
MDM2-229ENST00000543046 WNT2BQ93097 391 aa9.24□□□□□ -0.93
MDM2-229ENST00000543046 TRIM66O15016 1216 aa9.23□□□□□ -0.93
MDM2-229ENST00000543046 SAMD7Q7Z3H4 446 aa9.23□□□□□ -0.93
MDM2-229ENST00000543046 ANKK1Q8NFD2 765 aa9.23□□□□□ -0.93
MDM2-229ENST00000543046 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
MDM2-229ENST00000543046 HDGFP51858 240 aaKnown RBP9.22□□□□□ -0.93
MDM2-229ENST00000543046 SWT1Q5T5J6 900 aaKnown RBP9.22□□□□□ -0.93
MDM2-229ENST00000543046 KCTD12Q96CX2 325 aaKnown RBP9.22□□□□□ -0.93
MDM2-229ENST00000543046 LRCH3Q96II8 777 aa9.21□□□□□ -0.94
MDM2-229ENST00000543046 MDM2Q00987 491 aaPredicted RBP9.2□□□□□ -0.94
MDM2-229ENST00000543046 MMRN1Q13201 1228 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms