RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 FHOD3Q2V2M9 1422 aa16.29■□□□□ 0.2
TNC-212ENST00000542877 SKOR2Q2VWA4 1001 aaPredicted RBP16.29■□□□□ 0.2
TNC-212ENST00000542877 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
TNC-212ENST00000542877 ARID3AQ99856 593 aa16.29■□□□□ 0.2
TNC-212ENST00000542877 RSPH6AQ9H0K4 717 aa16.29■□□□□ 0.2
TNC-212ENST00000542877 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
TNC-212ENST00000542877 PDS5BQ9NTI5 1447 aa16.29■□□□□ 0.2
TNC-212ENST00000542877 HSP90B1P14625 803 aaKnown RBP16.29■□□□□ 0.2
TNC-212ENST00000542877 TDRD9Q8NDG6 1382 aaKnown RBP16.28■□□□□ 0.2
TNC-212ENST00000542877 ST20-MTHFSA0A0A6YYL1 179 aa16.28■□□□□ 0.2
TNC-212ENST00000542877 E9PSI1 815 aa16.28■□□□□ 0.2
TNC-212ENST00000542877 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
TNC-212ENST00000542877 KIF3BO15066 747 aa16.27■□□□□ 0.2
TNC-212ENST00000542877 SLC4A10Q6U841 1118 aa16.27■□□□□ 0.2
TNC-212ENST00000542877 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
TNC-212ENST00000542877 GORABQ5T7V8 394 aa16.27■□□□□ 0.19
TNC-212ENST00000542877 PANK3Q9H999 370 aa16.27■□□□□ 0.19
TNC-212ENST00000542877 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
TNC-212ENST00000542877 EXOC6Q8TAG9 804 aa16.26■□□□□ 0.19
TNC-212ENST00000542877 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
TNC-212ENST00000542877 KIF3AQ9Y496 699 aa16.26■□□□□ 0.19
TNC-212ENST00000542877 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
TNC-212ENST00000542877 CLSTN1O94985 981 aa16.24■□□□□ 0.19
TNC-212ENST00000542877 ZKSCAN2Q63HK3 967 aa16.24■□□□□ 0.19
TNC-212ENST00000542877 NOL8Q76FK4 1167 aaKnown RBP16.24■□□□□ 0.19
TNC-212ENST00000542877 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
TNC-212ENST00000542877 CSB-PGBD3P0DP91 1061 aa16.23■□□□□ 0.19
TNC-212ENST00000542877 HSP90AA2PQ14568 343 aaPredicted RBP16.23■□□□□ 0.19
TNC-212ENST00000542877 CRBNQ96SW2 442 aa16.23■□□□□ 0.19
TNC-212ENST00000542877 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
TNC-212ENST00000542877 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
TNC-212ENST00000542877 TNNT3P45378 269 aaPredicted RBP16.23■□□□□ 0.19
TNC-212ENST00000542877 GOLGA6L1Q8N7Z2 621 aa16.23■□□□□ 0.19
TNC-212ENST00000542877 NOC3LQ8WTT2 800 aaKnown RBP16.22■□□□□ 0.19
TNC-212ENST00000542877 ATP6V1DQ9Y5K8 247 aa16.22■□□□□ 0.19
TNC-212ENST00000542877 PLIN1O60240 522 aa16.22■□□□□ 0.19
TNC-212ENST00000542877 NGEFQ8N5V2 710 aa16.21■□□□□ 0.19
TNC-212ENST00000542877 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
TNC-212ENST00000542877 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
TNC-212ENST00000542877 USP47Q96K76 1375 aa16.2■□□□□ 0.18
TNC-212ENST00000542877 SLC4A3P48751 1232 aa16.2■□□□□ 0.18
TNC-212ENST00000542877 TAF7LQ5H9L4 462 aa16.2■□□□□ 0.18
TNC-212ENST00000542877 ANKRD45Q5TZF3 282 aa16.2■□□□□ 0.18
TNC-212ENST00000542877 ZNF330Q9Y3S2 320 aaPredicted RBP16.2■□□□□ 0.18
TNC-212ENST00000542877 CHMP4CQ96CF2 233 aa16.2■□□□□ 0.18
TNC-212ENST00000542877 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
TNC-212ENST00000542877 WIZO95785 1651 aa16.19■□□□□ 0.18
TNC-212ENST00000542877 SF3A1Q15459 793 aaKnown RBP16.18■□□□□ 0.18
TNC-212ENST00000542877 AMPHP49418 695 aa16.17■□□□□ 0.18
TNC-212ENST00000542877 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
TNC-212ENST00000542877 WASHC2CQ9Y4E1 1318 aa16.17■□□□□ 0.18
TNC-212ENST00000542877 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
TNC-212ENST00000542877 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
TNC-212ENST00000542877 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
TNC-212ENST00000542877 TPM3P06753 285 aa16.16■□□□□ 0.18
TNC-212ENST00000542877 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
TNC-212ENST00000542877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.16■□□□□ 0.18
TNC-212ENST00000542877 NGDNQ8NEJ9 315 aaKnown RBP16.16■□□□□ 0.18
TNC-212ENST00000542877 DDX19BQ9UMR2 479 aa16.16■□□□□ 0.18
TNC-212ENST00000542877 RASSF8Q8NHQ8 419 aa16.15■□□□□ 0.18
TNC-212ENST00000542877 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
TNC-212ENST00000542877 H3BQV1 296 aa16.14■□□□□ 0.17
TNC-212ENST00000542877 IFFO2Q5TF58 517 aa16.14■□□□□ 0.17
TNC-212ENST00000542877 CHMP5Q9NZZ3 219 aa16.14■□□□□ 0.17
TNC-212ENST00000542877 REC8O95072 547 aa16.14■□□□□ 0.17
TNC-212ENST00000542877 GOLGA6L19H0YKK7 550 aa16.13■□□□□ 0.17
TNC-212ENST00000542877 APAF1O14727 1248 aa16.13■□□□□ 0.17
TNC-212ENST00000542877 EVC2Q86UK5 1308 aa16.12■□□□□ 0.17
TNC-212ENST00000542877 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
TNC-212ENST00000542877 EID1Q9Y6B2 187 aa16.12■□□□□ 0.17
TNC-212ENST00000542877 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
TNC-212ENST00000542877 FAM184AQ8NB25 1140 aa16.12■□□□□ 0.17
TNC-212ENST00000542877 BECN2A8MW95 431 aa16.11■□□□□ 0.17
TNC-212ENST00000542877 ELL2O00472 640 aaPredicted RBP16.11■□□□□ 0.17
TNC-212ENST00000542877 DZIP1LQ8IYY4 767 aaKnown RBP16.1■□□□□ 0.17
TNC-212ENST00000542877 AAMPQ13685 434 aa16.09■□□□□ 0.17
TNC-212ENST00000542877 RUFY2Q8WXA3 655 aa16.09■□□□□ 0.17
TNC-212ENST00000542877 COG3Q96JB2 828 aa16.09■□□□□ 0.17
TNC-212ENST00000542877 VGFO15240 615 aaPredicted RBP16.09■□□□□ 0.17
TNC-212ENST00000542877 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
TNC-212ENST00000542877 A0A0U1RQG5 324 aaPredicted RBP16.08■□□□□ 0.17
TNC-212ENST00000542877 API5Q9BZZ5 524 aaKnown RBP16.08■□□□□ 0.17
TNC-212ENST00000542877 TOMM22Q9NS69 142 aa16.08■□□□□ 0.17
TNC-212ENST00000542877 DIAPH3Q9NSV4 1193 aa16.08■□□□□ 0.16
TNC-212ENST00000542877 LTV1Q96GA3 475 aaPredicted RBP16.07■□□□□ 0.16
TNC-212ENST00000542877 JPH4Q96JJ6 628 aa16.07■□□□□ 0.16
TNC-212ENST00000542877 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
TNC-212ENST00000542877 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
TNC-212ENST00000542877 RUSC2Q8N2Y8 1516 aa16.06■□□□□ 0.16
TNC-212ENST00000542877 ROCK1Q13464 1354 aa16.06■□□□□ 0.16
TNC-212ENST00000542877 ZKSCAN1P17029 563 aaPredicted RBP16.06■□□□□ 0.16
TNC-212ENST00000542877 TSR1Q2NL82 804 aaKnown RBP16.06■□□□□ 0.16
TNC-212ENST00000542877 TPD52L1Q16890 204 aaPredicted RBP16.05■□□□□ 0.16
TNC-212ENST00000542877 NUCB2P80303 420 aa16.05■□□□□ 0.16
TNC-212ENST00000542877 LRRFIP1Q32MZ4 808 aaKnown RBP16.05■□□□□ 0.16
TNC-212ENST00000542877 CNTLNQ9NXG0 1405 aa16.04■□□□□ 0.16
TNC-212ENST00000542877 TPM1P09493 284 aa16.04■□□□□ 0.16
TNC-212ENST00000542877 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
TNC-212ENST00000542877 GPS2Q13227 327 aa16.04■□□□□ 0.16
TNC-212ENST00000542877 FOXD4L6Q3SYB3 417 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms