RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 VPS9D1Q9Y2B5 631 aa7.54□□□□□ -1.2
SFSWAP-211ENST00000542813 EVI5O60447 810 aa7.53□□□□□ -1.2
SFSWAP-211ENST00000542813 PTPREP23469 700 aa7.53□□□□□ -1.2
SFSWAP-211ENST00000542813 KCTD12Q96CX2 325 aaKnown RBP7.53□□□□□ -1.2
SFSWAP-211ENST00000542813 SLC4A5Q9BY07 1137 aa7.53□□□□□ -1.2
SFSWAP-211ENST00000542813 MAP3K9P80192 1104 aa7.51□□□□□ -1.21
SFSWAP-211ENST00000542813 ZDHHC16Q969W1 377 aa7.5□□□□□ -1.21
SFSWAP-211ENST00000542813 LMOD2Q6P5Q4 547 aa7.49□□□□□ -1.21
SFSWAP-211ENST00000542813 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
SFSWAP-211ENST00000542813 BHMG1C9JSJ3 638 aaPredicted RBP7.48□□□□□ -1.21
SFSWAP-211ENST00000542813 ADAM33Q9BZ11 813 aa7.48□□□□□ -1.21
SFSWAP-211ENST00000542813 EMILIN3Q9NT22 766 aa7.48□□□□□ -1.21
SFSWAP-211ENST00000542813 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.46□□□□□ -1.22
SFSWAP-211ENST00000542813 CADPS2Q86UW7 1296 aa7.46□□□□□ -1.22
SFSWAP-211ENST00000542813 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
SFSWAP-211ENST00000542813 PTPN5P54829 565 aa7.45□□□□□ -1.22
SFSWAP-211ENST00000542813 MRPL50Q8N5N7 158 aaKnown RBP7.45□□□□□ -1.22
SFSWAP-211ENST00000542813 KCNV2Q8TDN2 545 aa7.45□□□□□ -1.22
SFSWAP-211ENST00000542813 NBPF3Q9H094 633 aa7.45□□□□□ -1.22
SFSWAP-211ENST00000542813 PPP1R3GB7ZBB8 358 aa7.44□□□□□ -1.22
SFSWAP-211ENST00000542813 WDR70Q9NW82 654 aa7.44□□□□□ -1.22
SFSWAP-211ENST00000542813 PCDHGA10Q9Y5H3 936 aa7.44□□□□□ -1.22
SFSWAP-211ENST00000542813 BRPF1P55201 1214 aaPredicted RBP7.43□□□□□ -1.22
SFSWAP-211ENST00000542813 THSD4Q6ZMP0 1018 aa7.43□□□□□ -1.22
SFSWAP-211ENST00000542813 WNT2BQ93097 391 aa7.43□□□□□ -1.22
SFSWAP-211ENST00000542813 FBXW7Q969H0 707 aa7.43□□□□□ -1.22
SFSWAP-211ENST00000542813 PHF14O94880 888 aa7.42□□□□□ -1.22
SFSWAP-211ENST00000542813 TYW1BQ6NUM6 668 aa7.42□□□□□ -1.22
SFSWAP-211ENST00000542813 CAMK2BQ13554 666 aa7.41□□□□□ -1.22
SFSWAP-211ENST00000542813 RABGEF1Q9UJ41 708 aa7.4□□□□□ -1.22
SFSWAP-211ENST00000542813 IFFO2Q5TF58 517 aa7.39□□□□□ -1.23
SFSWAP-211ENST00000542813 COL9A1P20849 921 aa7.38□□□□□ -1.23
SFSWAP-211ENST00000542813 EPAS1Q99814 870 aa7.38□□□□□ -1.23
SFSWAP-211ENST00000542813 DPYSL4O14531 572 aa7.37□□□□□ -1.23
SFSWAP-211ENST00000542813 PROX2Q3B8N5 592 aa7.37□□□□□ -1.23
SFSWAP-211ENST00000542813 NEUROD2Q15784 382 aa7.36□□□□□ -1.23
SFSWAP-211ENST00000542813 LAPTM4BQ86VI4 370 aa7.36□□□□□ -1.23
SFSWAP-211ENST00000542813 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
SFSWAP-211ENST00000542813 ONECUT3O60422 494 aaPredicted RBP7.35□□□□□ -1.23
SFSWAP-211ENST00000542813 C6orf132Q5T0Z8 1188 aa7.35□□□□□ -1.23
SFSWAP-211ENST00000542813 ZC3H15Q8WU90 426 aaKnown RBP7.35□□□□□ -1.23
SFSWAP-211ENST00000542813 SUPT5HO00267 1087 aaKnown RBP7.34□□□□□ -1.23
SFSWAP-211ENST00000542813 RGS20O76081 388 aa7.34□□□□□ -1.23
SFSWAP-211ENST00000542813 KIAA1468Q9P260 1216 aa7.33□□□□□ -1.24
SFSWAP-211ENST00000542813 ARHGEF1Q92888 912 aaKnown RBP7.32□□□□□ -1.24
SFSWAP-211ENST00000542813 A0A0G2JS52 829 aa7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 SOWAHBA6NEL2 793 aa7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 TRIM6-TRIM34B2RNG4 842 aa7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 DDX12PQ92771 950 aa7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 ZFRQ96KR1 1074 aaKnown RBP7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 SLC24A3Q9HC58 644 aa7.31□□□□□ -1.24
SFSWAP-211ENST00000542813 BCAMP50895 628 aa7.3□□□□□ -1.24
SFSWAP-211ENST00000542813 PDIA6Q15084 440 aa7.3□□□□□ -1.24
SFSWAP-211ENST00000542813 NYAP1Q6ZVC0 841 aa7.3□□□□□ -1.24
SFSWAP-211ENST00000542813 RBM33Q96EV2 1170 aaKnown RBP7.3□□□□□ -1.24
SFSWAP-211ENST00000542813 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-211ENST00000542813 ITGBL1O95965 494 aaPredicted RBP7.29□□□□□ -1.24
SFSWAP-211ENST00000542813 EN1Q05925 392 aaPredicted RBP7.28□□□□□ -1.24
SFSWAP-211ENST00000542813 FAM98CQ17RN3 349 aaKnown RBP7.28□□□□□ -1.24
SFSWAP-211ENST00000542813 SEPT9Q9UHD8 586 aaPredicted RBP7.28□□□□□ -1.24
SFSWAP-211ENST00000542813 TESPA1A2RU30 521 aaPredicted RBP7.27□□□□□ -1.25
SFSWAP-211ENST00000542813 SEMA3EO15041 775 aa7.27□□□□□ -1.25
SFSWAP-211ENST00000542813 E2F4Q16254 413 aa7.27□□□□□ -1.25
SFSWAP-211ENST00000542813 MAP3K7O43318 606 aa7.26□□□□□ -1.25
SFSWAP-211ENST00000542813 TSR1Q2NL82 804 aaKnown RBP7.25□□□□□ -1.25
SFSWAP-211ENST00000542813 PACS2Q86VP3 889 aa7.25□□□□□ -1.25
SFSWAP-211ENST00000542813 WBP1LQ9NX94 342 aa7.25□□□□□ -1.25
SFSWAP-211ENST00000542813 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.25□□□□□ -1.25
SFSWAP-211ENST00000542813 LRCH3Q96II8 777 aa7.24□□□□□ -1.25
SFSWAP-211ENST00000542813 TSKSQ9UJT2 592 aa7.24□□□□□ -1.25
SFSWAP-211ENST00000542813 ARIH1Q9Y4X5 557 aaPredicted RBP7.24□□□□□ -1.25
SFSWAP-211ENST00000542813 ZMYND10O75800 440 aa7.23□□□□□ -1.25
SFSWAP-211ENST00000542813 IRX2Q9BZI1 471 aaPredicted RBP7.23□□□□□ -1.25
SFSWAP-211ENST00000542813 TSR3Q9UJK0 312 aaKnown RBP7.23□□□□□ -1.25
SFSWAP-211ENST00000542813 CERKQ8TCT0 537 aa7.22□□□□□ -1.25
SFSWAP-211ENST00000542813 HPS5Q9UPZ3 1129 aa7.22□□□□□ -1.25
SFSWAP-211ENST00000542813 KCNC4Q03721 635 aa7.21□□□□□ -1.26
SFSWAP-211ENST00000542813 SMYD5Q6GMV2 418 aa7.21□□□□□ -1.26
SFSWAP-211ENST00000542813 CDCA7LQ96GN5 454 aa7.21□□□□□ -1.26
SFSWAP-211ENST00000542813 PODXL2Q9NZ53 605 aa7.21□□□□□ -1.26
SFSWAP-211ENST00000542813 PRSS12P56730 875 aa7.2□□□□□ -1.26
SFSWAP-211ENST00000542813 GRXCR2A6NFK2 248 aa7.19□□□□□ -1.26
SFSWAP-211ENST00000542813 PRIM1P49642 420 aaKnown RBP7.18□□□□□ -1.26
SFSWAP-211ENST00000542813 NBPF26B4DH59 902 aa7.17□□□□□ -1.26
SFSWAP-211ENST00000542813 PPP4CP60510 307 aa7.17□□□□□ -1.26
SFSWAP-211ENST00000542813 BARGINQ6ZT62 677 aa7.17□□□□□ -1.26
SFSWAP-211ENST00000542813 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
SFSWAP-211ENST00000542813 SMAPO00193 183 aa7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 UBTFP17480 764 aaKnown RBP7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 OSBPP22059 807 aa7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 SAMD7Q7Z3H4 446 aa7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 TATDN2Q93075 761 aa7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 RBM27Q9P2N5 1060 aaKnown RBP7.16□□□□□ -1.26
SFSWAP-211ENST00000542813 ZMYND15Q9H091 742 aa7.15□□□□□ -1.26
SFSWAP-211ENST00000542813 PNMA3Q9UL41 463 aa7.15□□□□□ -1.26
SFSWAP-211ENST00000542813 RANGAP1P46060 587 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-211ENST00000542813 AK7Q96M32 723 aa7.14□□□□□ -1.27
SFSWAP-211ENST00000542813 CDHR5Q9HBB8 845 aa7.14□□□□□ -1.27
SFSWAP-211ENST00000542813 GPBP1L1Q9HC44 474 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-211ENST00000542813 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms