RNA–Protein interactions for RNA: ENST00000542449.1

LINC02417-201, Transcript of long intergenic non-protein coding RNA 2417, humanhuman

TSL 2 BASIC

Gene LINC02417, Length 515 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02417-201ENST00000542449 DMRT2Q9Y5R5 561 aa21.73■■□□□ 1.07
LINC02417-201ENST00000542449 CLTCQ00610 1675 aaKnown RBP21.72■■□□□ 1.07
LINC02417-201ENST00000542449 ITGAEP38570 1179 aa21.71■■□□□ 1.07
LINC02417-201ENST00000542449 SHANK2Q9UPX8 1470 aa21.71■■□□□ 1.07
LINC02417-201ENST00000542449 PREX1Q8TCU6 1659 aa21.7■■□□□ 1.06
LINC02417-201ENST00000542449 PTPRKQ15262 1439 aa21.7■■□□□ 1.06
LINC02417-201ENST00000542449 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
LINC02417-201ENST00000542449 SETD1BQ9UPS6 1966 aaKnown RBP21.68■■□□□ 1.06
LINC02417-201ENST00000542449 MROH2AA6NES4 1674 aa21.68■■□□□ 1.06
LINC02417-201ENST00000542449 KDM5DQ9BY66 1539 aa21.66■■□□□ 1.06
LINC02417-201ENST00000542449 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
LINC02417-201ENST00000542449 TNRQ92752 1358 aa21.65■■□□□ 1.06
LINC02417-201ENST00000542449 NCOA1Q15788 1441 aa21.64■■□□□ 1.06
LINC02417-201ENST00000542449 KANK1Q14678 1352 aa21.64■■□□□ 1.06
LINC02417-201ENST00000542449 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
LINC02417-201ENST00000542449 NCKAP5LQ9HCH0 1330 aa21.61■■□□□ 1.05
LINC02417-201ENST00000542449 ILDR1Q86SU0 546 aaPredicted RBP21.61■■□□□ 1.05
LINC02417-201ENST00000542449 FAM135AQ9P2D6 1515 aa21.6■■□□□ 1.05
LINC02417-201ENST00000542449 PZPP20742 1482 aa21.6■■□□□ 1.05
LINC02417-201ENST00000542449 CROCC2H7BZ55 1655 aa21.58■■□□□ 1.05
LINC02417-201ENST00000542449 EIF2AK4Q9P2K8 1649 aaKnown RBP21.58■■□□□ 1.04
LINC02417-201ENST00000542449 PKD2Q13563 968 aa21.57■■□□□ 1.04
LINC02417-201ENST00000542449 THEMISQ8N1K5 641 aaPredicted RBP21.57■■□□□ 1.04
LINC02417-201ENST00000542449 ABCC3O15438 1527 aa21.56■■□□□ 1.04
LINC02417-201ENST00000542449 RNF17Q9BXT8 1623 aaKnown RBP21.55■■□□□ 1.04
LINC02417-201ENST00000542449 ANKRD50Q9ULJ7 1429 aa21.55■■□□□ 1.04
LINC02417-201ENST00000542449 A2ML1A8K2U0 1454 aa21.54■■□□□ 1.04
LINC02417-201ENST00000542449 ADGRL2O95490 1459 aa21.54■■□□□ 1.04
LINC02417-201ENST00000542449 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
LINC02417-201ENST00000542449 CERKQ8TCT0 537 aa21.52■■□□□ 1.04
LINC02417-201ENST00000542449 PTPRTO14522 1441 aa21.52■■□□□ 1.04
LINC02417-201ENST00000542449 CEP170BQ9Y4F5 1589 aaPredicted RBP21.52■■□□□ 1.04
LINC02417-201ENST00000542449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.51■■□□□ 1.03
LINC02417-201ENST00000542449 ANKLE2Q86XL3 938 aa21.51■■□□□ 1.03
LINC02417-201ENST00000542449 STAG3Q9UJ98 1225 aa21.5■■□□□ 1.03
LINC02417-201ENST00000542449 MYO3AQ8NEV4 1616 aa21.5■■□□□ 1.03
LINC02417-201ENST00000542449 ROCK1Q13464 1354 aa21.49■■□□□ 1.03
LINC02417-201ENST00000542449 FBXO41Q8TF61 875 aa21.49■■□□□ 1.03
LINC02417-201ENST00000542449 MROH1Q8NDA8 1641 aa21.48■■□□□ 1.03
LINC02417-201ENST00000542449 NLRP1Q9C000 1473 aa21.48■■□□□ 1.03
LINC02417-201ENST00000542449 ZC3H13Q5T200 1668 aaKnown RBP21.47■■□□□ 1.03
LINC02417-201ENST00000542449 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
LINC02417-201ENST00000542449 ERVK-7P63135 1459 aa21.46■■□□□ 1.03
LINC02417-201ENST00000542449 STRCQ7RTU9 1775 aa21.46■■□□□ 1.03
LINC02417-201ENST00000542449 PLA2R1Q13018 1463 aa21.45■■□□□ 1.03
LINC02417-201ENST00000542449 PRDM15P57071 1507 aaPredicted RBP21.45■■□□□ 1.02
LINC02417-201ENST00000542449 ARHGAP31Q2M1Z3 1444 aa21.45■■□□□ 1.02
LINC02417-201ENST00000542449 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
LINC02417-201ENST00000542449 CEP152O94986 1710 aa21.43■■□□□ 1.02
LINC02417-201ENST00000542449 ZNF142P52746 1687 aaPredicted RBP21.41■■□□□ 1.02
LINC02417-201ENST00000542449 SPATA31D1Q6ZQQ2 1576 aa21.41■■□□□ 1.02
LINC02417-201ENST00000542449 NUP155O75694 1391 aa21.4■■□□□ 1.02
LINC02417-201ENST00000542449 IDI1Q13907 227 aa21.39■■□□□ 1.01
LINC02417-201ENST00000542449 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
LINC02417-201ENST00000542449 DEPDC5O75140 1603 aa21.38■■□□□ 1.01
LINC02417-201ENST00000542449 TXNDC2Q86VQ3 553 aa21.38■■□□□ 1.01
LINC02417-201ENST00000542449 EID1Q9Y6B2 187 aa21.38■■□□□ 1.01
LINC02417-201ENST00000542449 LMTK2Q8IWU2 1503 aa21.37■■□□□ 1.01
LINC02417-201ENST00000542449 SLC52A1Q9NWF4 448 aa21.36■■□□□ 1.01
LINC02417-201ENST00000542449 CFAP65Q6ZU64 1925 aaKnown RBP21.35■■□□□ 1.01
LINC02417-201ENST00000542449 VWDEQ8N2E2 1590 aa21.35■■□□□ 1.01
LINC02417-201ENST00000542449 CHGAP10645 457 aaKnown RBP21.34■■□□□ 1.01
LINC02417-201ENST00000542449 TRIM52Q96A61 297 aa21.34■■□□□ 1.01
LINC02417-201ENST00000542449 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1.01
LINC02417-201ENST00000542449 NPHP4O75161 1426 aaPredicted RBP21.32■■□□□ 1
LINC02417-201ENST00000542449 BCANQ96GW7 911 aa21.31■■□□□ 1
LINC02417-201ENST00000542449 LTKP29376 864 aa21.3■■□□□ 1
LINC02417-201ENST00000542449 EFCAB6Q5THR3 1501 aa21.29■■□□□ 1
LINC02417-201ENST00000542449 NOS1P29475 1434 aa21.29■■□□□ 1
LINC02417-201ENST00000542449 RPRD2Q5VT52 1461 aaKnown RBP21.28■■□□□ 1
LINC02417-201ENST00000542449 HDGFP51858 240 aaKnown RBP21.27■■□□□ 1
LINC02417-201ENST00000542449 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
LINC02417-201ENST00000542449 NAIPQ13075 1403 aa21.25■□□□□ 0.99
LINC02417-201ENST00000542449 SENP3Q9H4L4 574 aaPredicted RBP21.25■□□□□ 0.99
LINC02417-201ENST00000542449 UNC13BO14795 1591 aa21.24■□□□□ 0.99
LINC02417-201ENST00000542449 PPP1R15AO75807 674 aaPredicted RBP21.24■□□□□ 0.99
LINC02417-201ENST00000542449 LTBP4Q8N2S1 1624 aa21.24■□□□□ 0.99
LINC02417-201ENST00000542449 SCAF11Q99590 1463 aaKnown RBP21.24■□□□□ 0.99
LINC02417-201ENST00000542449 MED14O60244 1454 aa21.23■□□□□ 0.99
LINC02417-201ENST00000542449 TET3O43151 1660 aa21.22■□□□□ 0.99
LINC02417-201ENST00000542449 UBAP1LF5GYI3 381 aa21.22■□□□□ 0.99
LINC02417-201ENST00000542449 NEURL4Q96JN8 1562 aa21.22■□□□□ 0.99
LINC02417-201ENST00000542449 PIK3C2BO00750 1634 aa21.22■□□□□ 0.99
LINC02417-201ENST00000542449 SYNMO15061 1565 aa21.21■□□□□ 0.99
LINC02417-201ENST00000542449 UBR1Q8IWV7 1749 aa21.21■□□□□ 0.99
LINC02417-201ENST00000542449 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
LINC02417-201ENST00000542449 HFM1A2PYH4 1435 aa21.2■□□□□ 0.98
LINC02417-201ENST00000542449 ARHGAP23Q9P227 1491 aa21.2■□□□□ 0.98
LINC02417-201ENST00000542449 POLR1AO95602 1720 aaPredicted RBP21.19■□□□□ 0.98
LINC02417-201ENST00000542449 SLIT1O75093 1534 aa21.19■□□□□ 0.98
LINC02417-201ENST00000542449 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.18■□□□□ 0.98
LINC02417-201ENST00000542449 SLC26A8Q96RN1 970 aa21.18■□□□□ 0.98
LINC02417-201ENST00000542449 IQGAP3Q86VI3 1631 aa21.18■□□□□ 0.98
LINC02417-201ENST00000542449 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
LINC02417-201ENST00000542449 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
LINC02417-201ENST00000542449 ZNF326Q5BKZ1 582 aaKnown RBP21.16■□□□□ 0.98
LINC02417-201ENST00000542449 SCAF1Q9H7N4 1312 aaKnown RBP21.15■□□□□ 0.98
LINC02417-201ENST00000542449 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
LINC02417-201ENST00000542449 IQSEC2Q5JU85 1478 aa21.14■□□□□ 0.98
LINC02417-201ENST00000542449 IQGAP1P46940 1657 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms