RNA–Protein interactions for RNA: ENST00000542443.5

TRDN-204, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-204ENST00000542443 TSHZ2Q9NRE2 1034 aa12.19□□□□□ -0.46
TRDN-204ENST00000542443 KCTD12Q96CX2 325 aaKnown RBP12.18□□□□□ -0.46
TRDN-204ENST00000542443 EPAS1Q99814 870 aa12.18□□□□□ -0.46
TRDN-204ENST00000542443 RBM33Q96EV2 1170 aaKnown RBP12.17□□□□□ -0.46
TRDN-204ENST00000542443 COL9A1P20849 921 aa12.16□□□□□ -0.46
TRDN-204ENST00000542443 PPP1R3GB7ZBB8 358 aa12.15□□□□□ -0.46
TRDN-204ENST00000542443 PDIA6Q15084 440 aa12.15□□□□□ -0.46
TRDN-204ENST00000542443 HCSTQ9UBK5 93 aa12.15□□□□□ -0.46
TRDN-204ENST00000542443 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
TRDN-204ENST00000542443 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
TRDN-204ENST00000542443 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
TRDN-204ENST00000542443 NBR1Q14596 966 aa12.12□□□□□ -0.47
TRDN-204ENST00000542443 C6orf132Q5T0Z8 1188 aa12.12□□□□□ -0.47
TRDN-204ENST00000542443 MRPL50Q8N5N7 158 aaKnown RBP12.12□□□□□ -0.47
TRDN-204ENST00000542443 GOLGA8CPA6NN73 597 aa12.11□□□□□ -0.47
TRDN-204ENST00000542443 NBPF3Q9H094 633 aa12.09□□□□□ -0.47
TRDN-204ENST00000542443 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
TRDN-204ENST00000542443 MAP3K7O43318 606 aa12.08□□□□□ -0.48
TRDN-204ENST00000542443 ARIH1Q9Y4X5 557 aaPredicted RBP12.08□□□□□ -0.48
TRDN-204ENST00000542443 PTPN5P54829 565 aa12.07□□□□□ -0.48
TRDN-204ENST00000542443 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
TRDN-204ENST00000542443 EN1Q05925 392 aaPredicted RBP12.06□□□□□ -0.48
TRDN-204ENST00000542443 RABGEF1Q9UJ41 708 aa12.06□□□□□ -0.48
TRDN-204ENST00000542443 WNT2BQ93097 391 aa12.05□□□□□ -0.48
TRDN-204ENST00000542443 TSR1Q2NL82 804 aaKnown RBP12.04□□□□□ -0.48
TRDN-204ENST00000542443 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
TRDN-204ENST00000542443 THSD4Q6ZMP0 1018 aa12.01□□□□□ -0.49
TRDN-204ENST00000542443 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
TRDN-204ENST00000542443 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
TRDN-204ENST00000542443 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
TRDN-204ENST00000542443 PRIM1P49642 420 aaKnown RBP11.99□□□□□ -0.49
TRDN-204ENST00000542443 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
TRDN-204ENST00000542443 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
TRDN-204ENST00000542443 KCNV2Q8TDN2 545 aa11.97□□□□□ -0.49
TRDN-204ENST00000542443 OSBPP22059 807 aa11.96□□□□□ -0.49
TRDN-204ENST00000542443 ANKK1Q8NFD2 765 aa11.96□□□□□ -0.49
TRDN-204ENST00000542443 LAPTM4BQ86VI4 370 aa11.95□□□□□ -0.5
TRDN-204ENST00000542443 ARHGEF1Q92888 912 aaKnown RBP11.95□□□□□ -0.5
TRDN-204ENST00000542443 PACS2Q86VP3 889 aa11.93□□□□□ -0.5
TRDN-204ENST00000542443 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
TRDN-204ENST00000542443 TSKSQ9UJT2 592 aa11.93□□□□□ -0.5
TRDN-204ENST00000542443 BCAMP50895 628 aa11.92□□□□□ -0.5
TRDN-204ENST00000542443 CDCA7LQ96GN5 454 aa11.92□□□□□ -0.5
TRDN-204ENST00000542443 CDHR5Q9HBB8 845 aa11.92□□□□□ -0.5
TRDN-204ENST00000542443 PRSS12P56730 875 aa11.9□□□□□ -0.5
TRDN-204ENST00000542443 FAM98CQ17RN3 349 aaKnown RBP11.9□□□□□ -0.5
TRDN-204ENST00000542443 CERKQ8TCT0 537 aa11.9□□□□□ -0.5
TRDN-204ENST00000542443 MLLT3P42568 568 aaPredicted RBP11.89□□□□□ -0.51
TRDN-204ENST00000542443 SOWAHBA6NEL2 793 aa11.88□□□□□ -0.51
TRDN-204ENST00000542443 SMAPO00193 183 aa11.87□□□□□ -0.51
TRDN-204ENST00000542443 FAM198AQ9UFP1 575 aa11.87□□□□□ -0.51
TRDN-204ENST00000542443 P3H3Q8IVL6 736 aa11.86□□□□□ -0.51
TRDN-204ENST00000542443 LRCH3Q96II8 777 aa11.84□□□□□ -0.51
TRDN-204ENST00000542443 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.83□□□□□ -0.52
TRDN-204ENST00000542443 PNMA3Q9UL41 463 aa11.83□□□□□ -0.52
TRDN-204ENST00000542443 NBPF26B4DH59 902 aa11.82□□□□□ -0.52
TRDN-204ENST00000542443 C3orf80F5H4A9 247 aa11.82□□□□□ -0.52
TRDN-204ENST00000542443 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
TRDN-204ENST00000542443 TATDN2Q93075 761 aa11.81□□□□□ -0.52
TRDN-204ENST00000542443 NPDC1Q9NQX5 325 aaPredicted RBP11.81□□□□□ -0.52
TRDN-204ENST00000542443 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
TRDN-204ENST00000542443 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
TRDN-204ENST00000542443 SEMA3EO15041 775 aa11.78□□□□□ -0.52
TRDN-204ENST00000542443 PADI6Q6TGC4 694 aa11.78□□□□□ -0.52
TRDN-204ENST00000542443 SAMD7Q7Z3H4 446 aa11.78□□□□□ -0.52
TRDN-204ENST00000542443 RBM27Q9P2N5 1060 aaKnown RBP11.78□□□□□ -0.52
TRDN-204ENST00000542443 TSR3Q9UJK0 312 aaKnown RBP11.78□□□□□ -0.52
TRDN-204ENST00000542443 NUTM2FA1L443 756 aa11.75□□□□□ -0.53
TRDN-204ENST00000542443 NYAP1Q6ZVC0 841 aa11.75□□□□□ -0.53
TRDN-204ENST00000542443 PPP4CP60510 307 aa11.74□□□□□ -0.53
TRDN-204ENST00000542443 RNF40O75150 1001 aa11.73□□□□□ -0.53
TRDN-204ENST00000542443 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
TRDN-204ENST00000542443 TTC13Q8NBP0 860 aa11.73□□□□□ -0.53
TRDN-204ENST00000542443 BCANQ96GW7 911 aa11.73□□□□□ -0.53
TRDN-204ENST00000542443 PTGDRQ13258 359 aa11.71□□□□□ -0.53
TRDN-204ENST00000542443 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
TRDN-204ENST00000542443 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
TRDN-204ENST00000542443 A0A0G2JS52 829 aa11.66□□□□□ -0.54
TRDN-204ENST00000542443 KCNC4Q03721 635 aa11.66□□□□□ -0.54
TRDN-204ENST00000542443 TESPA1A2RU30 521 aaPredicted RBP11.65□□□□□ -0.54
TRDN-204ENST00000542443 SWT1Q5T5J6 900 aaKnown RBP11.65□□□□□ -0.54
TRDN-204ENST00000542443 EYA1Q99502 592 aa11.65□□□□□ -0.54
TRDN-204ENST00000542443 FCHSD2O94868 740 aa11.64□□□□□ -0.55
TRDN-204ENST00000542443 FAM161AQ3B820 660 aa11.63□□□□□ -0.55
TRDN-204ENST00000542443 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
TRDN-204ENST00000542443 RBM26Q5T8P6 1007 aaKnown RBP11.62□□□□□ -0.55
TRDN-204ENST00000542443 SLF2Q8IX21 1173 aa11.61□□□□□ -0.55
TRDN-204ENST00000542443 SLC4A3P48751 1232 aa11.6□□□□□ -0.55
TRDN-204ENST00000542443 RBM46Q8TBY0 533 aaKnown RBP11.6□□□□□ -0.55
TRDN-204ENST00000542443 ADGRG1Q9Y653 693 aa11.6□□□□□ -0.55
TRDN-204ENST00000542443 APLP1P51693 650 aa11.58□□□□□ -0.56
TRDN-204ENST00000542443 DNAJB2P25686 324 aa11.57□□□□□ -0.56
TRDN-204ENST00000542443 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
TRDN-204ENST00000542443 MTRQ99707 1265 aa11.57□□□□□ -0.56
TRDN-204ENST00000542443 RGS20O76081 388 aa11.56□□□□□ -0.56
TRDN-204ENST00000542443 NECTIN2Q92692 538 aa11.56□□□□□ -0.56
TRDN-204ENST00000542443 RCCD1A6NED2 376 aa11.54□□□□□ -0.56
TRDN-204ENST00000542443 HIC1Q14526 733 aa11.54□□□□□ -0.56
TRDN-204ENST00000542443 TMEM134Q9H6X4 195 aa11.53□□□□□ -0.56
TRDN-204ENST00000542443 IL21Q9HBE4 155 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms