RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 TRAPPC8Q9Y2L5 1435 aa16.58■□□□□ 0.24
PDE1B-204ENST00000542335 C11orf95C9JLR9 678 aaPredicted RBP16.57■□□□□ 0.24
PDE1B-204ENST00000542335 RBM19Q9Y4C8 960 aaKnown RBP16.57■□□□□ 0.24
PDE1B-204ENST00000542335 FANCAO15360 1455 aa16.57■□□□□ 0.24
PDE1B-204ENST00000542335 UBE2Q2Q8WVN8 375 aa16.56■□□□□ 0.24
PDE1B-204ENST00000542335 RALGAPBQ86X10 1494 aa16.55■□□□□ 0.24
PDE1B-204ENST00000542335 BCORL1Q5H9F3 1711 aa16.55■□□□□ 0.24
PDE1B-204ENST00000542335 UNC13BO14795 1591 aa16.55■□□□□ 0.24
PDE1B-204ENST00000542335 ABCC1P33527 1531 aa16.54■□□□□ 0.24
PDE1B-204ENST00000542335 SPAG9O60271 1321 aaKnown RBP16.54■□□□□ 0.24
PDE1B-204ENST00000542335 PLXNC1O60486 1568 aa16.54■□□□□ 0.24
PDE1B-204ENST00000542335 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
PDE1B-204ENST00000542335 ABCA9Q8IUA7 1624 aa16.53■□□□□ 0.24
PDE1B-204ENST00000542335 FAM135AQ9P2D6 1515 aa16.52■□□□□ 0.24
PDE1B-204ENST00000542335 PRKRIP1Q9H875 184 aaPredicted RBP16.52■□□□□ 0.23
PDE1B-204ENST00000542335 USP47Q96K76 1375 aa16.51■□□□□ 0.23
PDE1B-204ENST00000542335 SCAPERQ9BY12 1400 aa16.51■□□□□ 0.23
PDE1B-204ENST00000542335 ARID4BQ4LE39 1312 aaPredicted RBP16.5■□□□□ 0.23
PDE1B-204ENST00000542335 NEFLP07196 543 aa16.5■□□□□ 0.23
PDE1B-204ENST00000542335 ADGRL1O94910 1474 aa16.5■□□□□ 0.23
PDE1B-204ENST00000542335 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
PDE1B-204ENST00000542335 CD109Q6YHK3 1445 aa16.49■□□□□ 0.23
PDE1B-204ENST00000542335 IQGAP3Q86VI3 1631 aa16.49■□□□□ 0.23
PDE1B-204ENST00000542335 ZNF326Q5BKZ1 582 aaKnown RBP16.48■□□□□ 0.23
PDE1B-204ENST00000542335 RIMBP3CA6NJZ7 1639 aa16.47■□□□□ 0.23
PDE1B-204ENST00000542335 RIMBP3BA6NNM3 1639 aa16.47■□□□□ 0.23
PDE1B-204ENST00000542335 RIMBP3Q9UFD9 1639 aa16.47■□□□□ 0.23
PDE1B-204ENST00000542335 ARAP3Q8WWN8 1544 aa16.47■□□□□ 0.23
PDE1B-204ENST00000542335 HNRNPUQ00839 825 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDE1B-204ENST00000542335 MSH5O43196 834 aa16.47■□□□□ 0.23
PDE1B-204ENST00000542335 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
PDE1B-204ENST00000542335 DHX29Q7Z478 1369 aaKnown RBP16.44■□□□□ 0.22
PDE1B-204ENST00000542335 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
PDE1B-204ENST00000542335 MAGI2Q86UL8 1455 aa16.44■□□□□ 0.22
PDE1B-204ENST00000542335 E9PCH4 1651 aa16.43■□□□□ 0.22
PDE1B-204ENST00000542335 ROCK2O75116 1388 aaKnown RBP16.43■□□□□ 0.22
PDE1B-204ENST00000542335 LAMC1P11047 1609 aa16.42■□□□□ 0.22
PDE1B-204ENST00000542335 CCDC184Q52MB2 194 aa16.42■□□□□ 0.22
PDE1B-204ENST00000542335 ZFYVE16Q7Z3T8 1539 aa16.41■□□□□ 0.22
PDE1B-204ENST00000542335 KDM2AQ9Y2K7 1162 aa16.41■□□□□ 0.22
PDE1B-204ENST00000542335 KIF3BO15066 747 aa16.4■□□□□ 0.22
PDE1B-204ENST00000542335 ERBINQ96RT1 1412 aa16.4■□□□□ 0.22
PDE1B-204ENST00000542335 ATP7AQ04656 1500 aa16.4■□□□□ 0.22
PDE1B-204ENST00000542335 RAPGEF3O95398 923 aa16.39■□□□□ 0.21
PDE1B-204ENST00000542335 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
PDE1B-204ENST00000542335 CCDC144AA2RUR9 1427 aa16.39■□□□□ 0.21
PDE1B-204ENST00000542335 RTEL1-TNFRSF6BF6WH68 1400 aa16.39■□□□□ 0.21
PDE1B-204ENST00000542335 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
PDE1B-204ENST00000542335 ATP10AO60312 1499 aa16.38■□□□□ 0.21
PDE1B-204ENST00000542335 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
PDE1B-204ENST00000542335 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
PDE1B-204ENST00000542335 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
PDE1B-204ENST00000542335 EIF2AK4Q9P2K8 1649 aaKnown RBP16.37■□□□□ 0.21
PDE1B-204ENST00000542335 CARD11Q9BXL7 1154 aa16.37■□□□□ 0.21
PDE1B-204ENST00000542335 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
PDE1B-204ENST00000542335 DCAF11Q8TEB1 546 aa16.35■□□□□ 0.21
PDE1B-204ENST00000542335 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
PDE1B-204ENST00000542335 INO80Q9ULG1 1556 aaPredicted RBP16.34■□□□□ 0.21
PDE1B-204ENST00000542335 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
PDE1B-204ENST00000542335 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
PDE1B-204ENST00000542335 A2MP01023 1474 aa16.33■□□□□ 0.2
PDE1B-204ENST00000542335 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.2
PDE1B-204ENST00000542335 FAM9BQ8IZU0 186 aa16.32■□□□□ 0.2
PDE1B-204ENST00000542335 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
PDE1B-204ENST00000542335 KTN1Q86UP2 1357 aaKnown RBP16.32■□□□□ 0.2
PDE1B-204ENST00000542335 POGZQ7Z3K3 1410 aa16.31■□□□□ 0.2
PDE1B-204ENST00000542335 KIDINS220Q9ULH0 1771 aa16.31■□□□□ 0.2
PDE1B-204ENST00000542335 CFAP74Q9C0B2 1584 aa16.31■□□□□ 0.2
PDE1B-204ENST00000542335 RNF17Q9BXT8 1623 aaKnown RBP16.31■□□□□ 0.2
PDE1B-204ENST00000542335 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
PDE1B-204ENST00000542335 GGT6Q6P531 493 aa16.3■□□□□ 0.2
PDE1B-204ENST00000542335 KANK1Q14678 1352 aa16.29■□□□□ 0.2
PDE1B-204ENST00000542335 TSPOAP1O95153 1857 aa16.28■□□□□ 0.2
PDE1B-204ENST00000542335 ST20-MTHFSA0A0A6YYL1 179 aa16.28■□□□□ 0.2
PDE1B-204ENST00000542335 CEP152O94986 1710 aa16.27■□□□□ 0.2
PDE1B-204ENST00000542335 NEO1Q92859 1461 aa16.26■□□□□ 0.19
PDE1B-204ENST00000542335 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
PDE1B-204ENST00000542335 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
PDE1B-204ENST00000542335 POLR3GLQ9BT43 218 aa16.25■□□□□ 0.19
PDE1B-204ENST00000542335 COL17A1Q9UMD9 1497 aaPredicted RBP16.25■□□□□ 0.19
PDE1B-204ENST00000542335 TRPM2O94759 1503 aa16.24■□□□□ 0.19
PDE1B-204ENST00000542335 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
PDE1B-204ENST00000542335 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
PDE1B-204ENST00000542335 SALL2Q9Y467 1007 aaPredicted RBP16.24■□□□□ 0.19
PDE1B-204ENST00000542335 HECW2Q9P2P5 1572 aa16.24■□□□□ 0.19
PDE1B-204ENST00000542335 TET3O43151 1660 aa16.23■□□□□ 0.19
PDE1B-204ENST00000542335 DIP2BQ9P265 1576 aa16.22■□□□□ 0.19
PDE1B-204ENST00000542335 MLH3Q9UHC1 1453 aa16.22■□□□□ 0.19
PDE1B-204ENST00000542335 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
PDE1B-204ENST00000542335 MADDQ8WXG6 1647 aa16.22■□□□□ 0.19
PDE1B-204ENST00000542335 RALBP1Q15311 655 aa16.22■□□□□ 0.19
PDE1B-204ENST00000542335 PKNOX2Q96KN3 472 aa16.21■□□□□ 0.19
PDE1B-204ENST00000542335 IQGAP1P46940 1657 aa16.21■□□□□ 0.19
PDE1B-204ENST00000542335 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.18
PDE1B-204ENST00000542335 VWDEQ8N2E2 1590 aa16.21■□□□□ 0.18
PDE1B-204ENST00000542335 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
PDE1B-204ENST00000542335 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
PDE1B-204ENST00000542335 GLI2P10070 1586 aa16.2■□□□□ 0.18
PDE1B-204ENST00000542335 NEURL4Q96JN8 1562 aa16.2■□□□□ 0.18
PDE1B-204ENST00000542335 ABCA6Q8N139 1617 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms