RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ADGRL1O94910 1474 aa12.54□□□□□ -0.4
THBS3-211ENST00000541990 PPP4R2Q9NY27 417 aa12.53□□□□□ -0.4
THBS3-211ENST00000541990 PZPP20742 1482 aa12.52□□□□□ -0.41
THBS3-211ENST00000541990 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
THBS3-211ENST00000541990 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
THBS3-211ENST00000541990 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
THBS3-211ENST00000541990 HSPA5P11021 654 aaKnown RBP12.5□□□□□ -0.41
THBS3-211ENST00000541990 MLECQ14165 292 aa12.5□□□□□ -0.41
THBS3-211ENST00000541990 FAM9BQ8IZU0 186 aa12.5□□□□□ -0.41
THBS3-211ENST00000541990 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
THBS3-211ENST00000541990 RSPH4AQ5TD94 716 aa12.5□□□□□ -0.41
THBS3-211ENST00000541990 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
THBS3-211ENST00000541990 PLPPR3Q6T4P5 718 aa12.48□□□□□ -0.41
THBS3-211ENST00000541990 GCC2Q8IWJ2 1684 aa12.48□□□□□ -0.41
THBS3-211ENST00000541990 ADGRL2O95490 1459 aa12.48□□□□□ -0.41
THBS3-211ENST00000541990 C11orf95C9JLR9 678 aaPredicted RBP12.48□□□□□ -0.41
THBS3-211ENST00000541990 KIAA1107Q9UPP5 1409 aa12.47□□□□□ -0.41
THBS3-211ENST00000541990 ABCC1P33527 1531 aa12.47□□□□□ -0.41
THBS3-211ENST00000541990 SENP3-EIF4A1A0A087X0R7 540 aa12.47□□□□□ -0.41
THBS3-211ENST00000541990 NOP58Q9Y2X3 529 aaKnown RBP12.47□□□□□ -0.41
THBS3-211ENST00000541990 TSPOAP1O95153 1857 aa12.46□□□□□ -0.41
THBS3-211ENST00000541990 DCAF11Q8TEB1 546 aa12.45□□□□□ -0.42
THBS3-211ENST00000541990 CROCC2H7BZ55 1655 aa12.45□□□□□ -0.42
THBS3-211ENST00000541990 POLR3GLQ9BT43 218 aa12.44□□□□□ -0.42
THBS3-211ENST00000541990 ABCA9Q8IUA7 1624 aa12.44□□□□□ -0.42
THBS3-211ENST00000541990 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
THBS3-211ENST00000541990 ARHGEF5Q12774 1597 aa12.43□□□□□ -0.42
THBS3-211ENST00000541990 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
THBS3-211ENST00000541990 ANO8Q9HCE9 1232 aaPredicted RBP12.43□□□□□ -0.42
THBS3-211ENST00000541990 MRS2Q9HD23 443 aa12.43□□□□□ -0.42
THBS3-211ENST00000541990 SHANK2Q9UPX8 1470 aa12.43□□□□□ -0.42
THBS3-211ENST00000541990 YEATS2Q9ULM3 1422 aa12.43□□□□□ -0.42
THBS3-211ENST00000541990 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
THBS3-211ENST00000541990 ERICH6BQ5W0A0 696 aa12.42□□□□□ -0.42
THBS3-211ENST00000541990 PRKRIP1Q9H875 184 aaPredicted RBP12.42□□□□□ -0.42
THBS3-211ENST00000541990 CNTLNQ9NXG0 1405 aa12.42□□□□□ -0.42
THBS3-211ENST00000541990 ADGBQ8N7X0 1667 aa12.41□□□□□ -0.42
THBS3-211ENST00000541990 ZBED9Q6R2W3 1325 aa12.39□□□□□ -0.43
THBS3-211ENST00000541990 FAM135AQ9P2D6 1515 aa12.39□□□□□ -0.43
THBS3-211ENST00000541990 COL17A1Q9UMD9 1497 aaPredicted RBP12.39□□□□□ -0.43
THBS3-211ENST00000541990 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
THBS3-211ENST00000541990 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
THBS3-211ENST00000541990 ATP7AQ04656 1500 aa12.38□□□□□ -0.43
THBS3-211ENST00000541990 NBPF1Q3BBV0 1214 aa12.37□□□□□ -0.43
THBS3-211ENST00000541990 PLA2R1Q13018 1463 aa12.37□□□□□ -0.43
THBS3-211ENST00000541990 WASHC2CQ9Y4E1 1318 aa12.37□□□□□ -0.43
THBS3-211ENST00000541990 DHX29Q7Z478 1369 aaKnown RBP12.36□□□□□ -0.43
THBS3-211ENST00000541990 POGZQ7Z3K3 1410 aa12.36□□□□□ -0.43
THBS3-211ENST00000541990 CCDC7Q96M83 1385 aa12.36□□□□□ -0.43
THBS3-211ENST00000541990 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
THBS3-211ENST00000541990 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
THBS3-211ENST00000541990 IL27Q8NEV9 243 aa12.35□□□□□ -0.43
THBS3-211ENST00000541990 SALL2Q9Y467 1007 aaPredicted RBP12.35□□□□□ -0.43
THBS3-211ENST00000541990 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
THBS3-211ENST00000541990 ZNF518AQ6AHZ1 1483 aa12.35□□□□□ -0.43
THBS3-211ENST00000541990 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
THBS3-211ENST00000541990 ARID4BQ4LE39 1312 aaPredicted RBP12.34□□□□□ -0.43
THBS3-211ENST00000541990 RTN4Q9NQC3 1192 aaKnown RBP12.34□□□□□ -0.43
THBS3-211ENST00000541990 DIP2BQ9P265 1576 aa12.33□□□□□ -0.44
THBS3-211ENST00000541990 CCDC144AA2RUR9 1427 aa12.33□□□□□ -0.44
THBS3-211ENST00000541990 UGGT1Q9NYU2 1555 aa12.32□□□□□ -0.44
THBS3-211ENST00000541990 A2MP01023 1474 aa12.32□□□□□ -0.44
THBS3-211ENST00000541990 KIDINS220Q9ULH0 1771 aa12.32□□□□□ -0.44
THBS3-211ENST00000541990 IPO9Q96P70 1041 aaKnown RBP12.32□□□□□ -0.44
THBS3-211ENST00000541990 TEX14Q8IWB6 1497 aa12.32□□□□□ -0.44
THBS3-211ENST00000541990 RTEL1-TNFRSF6BF6WH68 1400 aa12.31□□□□□ -0.44
THBS3-211ENST00000541990 KIF7Q2M1P5 1343 aa12.31□□□□□ -0.44
THBS3-211ENST00000541990 CCDC136Q96JN2 1154 aa12.31□□□□□ -0.44
THBS3-211ENST00000541990 ERBINQ96RT1 1412 aa12.31□□□□□ -0.44
THBS3-211ENST00000541990 CARD11Q9BXL7 1154 aa12.3□□□□□ -0.44
THBS3-211ENST00000541990 MAST1Q9Y2H9 1570 aa12.3□□□□□ -0.44
THBS3-211ENST00000541990 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
THBS3-211ENST00000541990 ARAP3Q8WWN8 1544 aa12.3□□□□□ -0.44
THBS3-211ENST00000541990 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
THBS3-211ENST00000541990 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
THBS3-211ENST00000541990 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
THBS3-211ENST00000541990 INO80Q9ULG1 1556 aaPredicted RBP12.28□□□□□ -0.44
THBS3-211ENST00000541990 KANK1Q14678 1352 aa12.28□□□□□ -0.44
THBS3-211ENST00000541990 RTL5Q5HYW3 569 aaPredicted RBP12.27□□□□□ -0.44
THBS3-211ENST00000541990 SMG6Q86US8 1419 aaKnown RBP12.27□□□□□ -0.44
THBS3-211ENST00000541990 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.45
THBS3-211ENST00000541990 CEBPAP49715 358 aaPredicted RBP12.27□□□□□ -0.45
THBS3-211ENST00000541990 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
THBS3-211ENST00000541990 FRMPD1Q5SYB0 1578 aa12.27□□□□□ -0.45
THBS3-211ENST00000541990 LAS1LQ9Y4W2 734 aaKnown RBP12.27□□□□□ -0.45
THBS3-211ENST00000541990 NEO1Q92859 1461 aa12.26□□□□□ -0.45
THBS3-211ENST00000541990 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
THBS3-211ENST00000541990 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
THBS3-211ENST00000541990 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
THBS3-211ENST00000541990 MLH3Q9UHC1 1453 aa12.25□□□□□ -0.45
THBS3-211ENST00000541990 ATP10AO60312 1499 aa12.24□□□□□ -0.45
THBS3-211ENST00000541990 ADGRF5Q8IZF2 1346 aa12.24□□□□□ -0.45
THBS3-211ENST00000541990 CFAP70Q5T0N1 1121 aa12.24□□□□□ -0.45
THBS3-211ENST00000541990 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
THBS3-211ENST00000541990 IDI1Q13907 227 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 KDM5DQ9BY66 1539 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 UNC13BO14795 1591 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 NPATQ14207 1427 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 TMEM132EQ6IEE7 984 aa12.23□□□□□ -0.45
THBS3-211ENST00000541990 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms