RNA–Protein interactions for RNA: ENST00000541869.5

POLR1B-217, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 5,059 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-217ENST00000541869 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
POLR1B-217ENST00000541869 RAPGEF3O95398 923 aa13.27□□□□□ -0.29
POLR1B-217ENST00000541869 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
POLR1B-217ENST00000541869 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
POLR1B-217ENST00000541869 ANP32AP39687 249 aaKnown RBP13.26□□□□□ -0.29
POLR1B-217ENST00000541869 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
POLR1B-217ENST00000541869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.26□□□□□ -0.29
POLR1B-217ENST00000541869 FYCO1Q9BQS8 1478 aa13.26□□□□□ -0.29
POLR1B-217ENST00000541869 COG3Q96JB2 828 aa13.26□□□□□ -0.29
POLR1B-217ENST00000541869 TOM1O60784 492 aa13.26□□□□□ -0.29
POLR1B-217ENST00000541869 CASC1Q6TDU7 716 aa13.26□□□□□ -0.29
POLR1B-217ENST00000541869 SCAPERQ9BY12 1400 aa13.25□□□□□ -0.29
POLR1B-217ENST00000541869 TTC5Q8N0Z6 440 aa13.25□□□□□ -0.29
POLR1B-217ENST00000541869 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
POLR1B-217ENST00000541869 FKBP8Q14318 412 aa13.25□□□□□ -0.29
POLR1B-217ENST00000541869 CD109Q6YHK3 1445 aa13.25□□□□□ -0.29
POLR1B-217ENST00000541869 DHX57Q6P158 1386 aaKnown RBP13.24□□□□□ -0.29
POLR1B-217ENST00000541869 MINK1Q8N4C8 1332 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-217ENST00000541869 RAPGEF4Q8WZA2 1011 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 STK31Q9BXU1 1019 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 TROQ12816 1431 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-217ENST00000541869 UBAP1LF5GYI3 381 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 FGD1P98174 961 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 GORABQ5T7V8 394 aa13.24□□□□□ -0.29
POLR1B-217ENST00000541869 ESCO1Q5FWF5 840 aa13.23□□□□□ -0.29
POLR1B-217ENST00000541869 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
POLR1B-217ENST00000541869 FGD6Q6ZV73 1430 aa13.23□□□□□ -0.29
POLR1B-217ENST00000541869 ANKRD50Q9ULJ7 1429 aa13.23□□□□□ -0.29
POLR1B-217ENST00000541869 PDE3BQ13370 1112 aa13.22□□□□□ -0.29
POLR1B-217ENST00000541869 CHMP3Q9Y3E7 222 aa13.22□□□□□ -0.29
POLR1B-217ENST00000541869 TEFQ10587 303 aa13.21□□□□□ -0.29
POLR1B-217ENST00000541869 NLRP2Q9NX02 1062 aa13.21□□□□□ -0.29
POLR1B-217ENST00000541869 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.3
POLR1B-217ENST00000541869 KCNJ4P48050 445 aa13.21□□□□□ -0.3
POLR1B-217ENST00000541869 NCOA2Q15596 1464 aa13.21□□□□□ -0.3
POLR1B-217ENST00000541869 SLC52A1Q9NWF4 448 aa13.2□□□□□ -0.3
POLR1B-217ENST00000541869 USP35Q9P2H5 1018 aa13.2□□□□□ -0.3
POLR1B-217ENST00000541869 KIF21BO75037 1637 aa13.2□□□□□ -0.3
POLR1B-217ENST00000541869 RALBP1Q15311 655 aa13.2□□□□□ -0.3
POLR1B-217ENST00000541869 FRAT1Q92837 279 aaPredicted RBP13.19□□□□□ -0.3
POLR1B-217ENST00000541869 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
POLR1B-217ENST00000541869 PEG3Q9GZU2 1588 aa13.19□□□□□ -0.3
POLR1B-217ENST00000541869 IQGAP2Q13576 1575 aa13.19□□□□□ -0.3
POLR1B-217ENST00000541869 CWC22Q9HCG8 908 aaKnown RBP13.18□□□□□ -0.3
POLR1B-217ENST00000541869 STRN4Q9NRL3 753 aa13.18□□□□□ -0.3
POLR1B-217ENST00000541869 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.17□□□□□ -0.3
POLR1B-217ENST00000541869 MIER1Q8N108 512 aa13.17□□□□□ -0.3
POLR1B-217ENST00000541869 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
POLR1B-217ENST00000541869 LRRC9Q6ZRR7 1453 aa13.17□□□□□ -0.3
POLR1B-217ENST00000541869 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
POLR1B-217ENST00000541869 PPP6R1Q9UPN7 881 aa13.16□□□□□ -0.3
POLR1B-217ENST00000541869 ZNF608Q9ULD9 1512 aaPredicted RBP13.16□□□□□ -0.3
POLR1B-217ENST00000541869 CGNL1Q0VF96 1302 aa13.16□□□□□ -0.3
POLR1B-217ENST00000541869 SENP3-EIF4A1A0A087X0R7 540 aa13.15□□□□□ -0.3
POLR1B-217ENST00000541869 NGLY1Q96IV0 654 aa13.15□□□□□ -0.3
POLR1B-217ENST00000541869 IPO8O15397 1037 aaKnown RBP13.14□□□□□ -0.31
POLR1B-217ENST00000541869 PRDM11Q9NQV5 511 aa13.14□□□□□ -0.31
POLR1B-217ENST00000541869 CUL7Q14999 1698 aa13.14□□□□□ -0.31
POLR1B-217ENST00000541869 UNC13AQ9UPW8 1703 aa13.14□□□□□ -0.31
POLR1B-217ENST00000541869 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
POLR1B-217ENST00000541869 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
POLR1B-217ENST00000541869 PLB1Q6P1J6 1458 aa13.14□□□□□ -0.31
POLR1B-217ENST00000541869 TRIM34Q9BYJ4 488 aa13.13□□□□□ -0.31
POLR1B-217ENST00000541869 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
POLR1B-217ENST00000541869 EHBP1L1Q8N3D4 1523 aa13.13□□□□□ -0.31
POLR1B-217ENST00000541869 CLSTN1O94985 981 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 NLRP6P59044 892 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 ZRSR1Q15695 479 aaKnown RBP13.12□□□□□ -0.31
POLR1B-217ENST00000541869 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 ST20-MTHFSA0A0A6YYL1 179 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 MIA2Q96PC5 1412 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
POLR1B-217ENST00000541869 NOL10Q9BSC4 688 aaKnown RBP13.11□□□□□ -0.31
POLR1B-217ENST00000541869 RRBP1Q9P2E9 1410 aaKnown RBP13.11□□□□□ -0.31
POLR1B-217ENST00000541869 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
POLR1B-217ENST00000541869 AKNAQ7Z591 1439 aa13.11□□□□□ -0.31
POLR1B-217ENST00000541869 RBM33Q96EV2 1170 aaKnown RBP13.1□□□□□ -0.31
POLR1B-217ENST00000541869 SLC26A8Q96RN1 970 aa13.09□□□□□ -0.31
POLR1B-217ENST00000541869 TEX14Q8IWB6 1497 aa13.09□□□□□ -0.31
POLR1B-217ENST00000541869 PHLDB1Q86UU1 1377 aa13.09□□□□□ -0.31
POLR1B-217ENST00000541869 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
POLR1B-217ENST00000541869 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
POLR1B-217ENST00000541869 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
POLR1B-217ENST00000541869 DENND4BO75064 1496 aaPredicted RBP13.08□□□□□ -0.32
POLR1B-217ENST00000541869 FBXW7Q969H0 707 aa13.08□□□□□ -0.32
POLR1B-217ENST00000541869 NEXNQ0ZGT2 675 aa13.07□□□□□ -0.32
POLR1B-217ENST00000541869 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
POLR1B-217ENST00000541869 NLRP13Q86W25 1043 aa13.07□□□□□ -0.32
POLR1B-217ENST00000541869 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
POLR1B-217ENST00000541869 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
POLR1B-217ENST00000541869 NCLP19338 710 aaKnown RBP13.06□□□□□ -0.32
POLR1B-217ENST00000541869 RPGRIP1LQ68CZ1 1315 aa13.06□□□□□ -0.32
POLR1B-217ENST00000541869 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
POLR1B-217ENST00000541869 ADAMTS2O95450 1211 aa13.06□□□□□ -0.32
POLR1B-217ENST00000541869 PANK3Q9H999 370 aa13.06□□□□□ -0.32
POLR1B-217ENST00000541869 NUTM2GQ5VZR2 741 aa13.05□□□□□ -0.32
POLR1B-217ENST00000541869 TMEM132EQ6IEE7 984 aa13.05□□□□□ -0.32
POLR1B-217ENST00000541869 ANO8Q9HCE9 1232 aaPredicted RBP13.05□□□□□ -0.32
POLR1B-217ENST00000541869 EPRSP07814 1512 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms