RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 CCDC144AA2RUR9 1427 aa20.08■□□□□ 0.81
VARS2-211ENST00000541562 RCAN3Q9UKA8 241 aa20.06■□□□□ 0.8
VARS2-211ENST00000541562 KIF3BO15066 747 aa20.05■□□□□ 0.8
VARS2-211ENST00000541562 LAS1LQ9Y4W2 734 aaKnown RBP20.05■□□□□ 0.8
VARS2-211ENST00000541562 DISP3Q9P2K9 1392 aa20.04■□□□□ 0.8
VARS2-211ENST00000541562 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
VARS2-211ENST00000541562 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
VARS2-211ENST00000541562 PLEKHH2Q8IVE3 1493 aa20.04■□□□□ 0.8
VARS2-211ENST00000541562 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
VARS2-211ENST00000541562 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
VARS2-211ENST00000541562 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
VARS2-211ENST00000541562 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
VARS2-211ENST00000541562 SLC4A3P48751 1232 aa20■□□□□ 0.79
VARS2-211ENST00000541562 GGT6Q6P531 493 aa19.99■□□□□ 0.79
VARS2-211ENST00000541562 KNSTRNQ9Y448 316 aa19.99■□□□□ 0.79
VARS2-211ENST00000541562 NLRP13Q86W25 1043 aa19.98■□□□□ 0.79
VARS2-211ENST00000541562 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
VARS2-211ENST00000541562 TMF1P82094 1093 aa19.98■□□□□ 0.79
VARS2-211ENST00000541562 CRBNQ96SW2 442 aa19.98■□□□□ 0.79
VARS2-211ENST00000541562 CFAP70Q5T0N1 1121 aa19.97■□□□□ 0.79
VARS2-211ENST00000541562 WDR43Q15061 677 aaKnown RBP eCLIP19.97■□□□□ 0.79
VARS2-211ENST00000541562 RRP7AQ9Y3A4 280 aaKnown RBP19.96■□□□□ 0.79
VARS2-211ENST00000541562 RGS3P49796 1198 aa19.95■□□□□ 0.78
VARS2-211ENST00000541562 ERCC6L2Q5T890 1561 aa19.95■□□□□ 0.78
VARS2-211ENST00000541562 ANP32AP39687 249 aaKnown RBP19.95■□□□□ 0.78
VARS2-211ENST00000541562 SPAG9O60271 1321 aaKnown RBP19.94■□□□□ 0.78
VARS2-211ENST00000541562 TMEM132EQ6IEE7 984 aa19.94■□□□□ 0.78
VARS2-211ENST00000541562 SYCP2Q9BX26 1530 aa19.94■□□□□ 0.78
VARS2-211ENST00000541562 RALBP1Q15311 655 aa19.94■□□□□ 0.78
VARS2-211ENST00000541562 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
VARS2-211ENST00000541562 NOP58Q9Y2X3 529 aaKnown RBP19.93■□□□□ 0.78
VARS2-211ENST00000541562 TESK2Q96S53 571 aa19.93■□□□□ 0.78
VARS2-211ENST00000541562 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
VARS2-211ENST00000541562 PER1O15534 1290 aaPredicted RBP19.91■□□□□ 0.78
VARS2-211ENST00000541562 ZBTB47Q9UFB7 747 aaPredicted RBP19.9■□□□□ 0.78
VARS2-211ENST00000541562 SMG6Q86US8 1419 aaKnown RBP19.9■□□□□ 0.78
VARS2-211ENST00000541562 NUP160Q12769 1436 aa19.88■□□□□ 0.77
VARS2-211ENST00000541562 FANCIQ9NVI1 1328 aa19.88■□□□□ 0.77
VARS2-211ENST00000541562 ABCC10Q5T3U5 1492 aa19.88■□□□□ 0.77
VARS2-211ENST00000541562 APAF1O14727 1248 aa19.88■□□□□ 0.77
VARS2-211ENST00000541562 BCL2L13Q9BXK5 485 aa19.88■□□□□ 0.77
VARS2-211ENST00000541562 MBD5Q9P267 1494 aa19.87■□□□□ 0.77
VARS2-211ENST00000541562 STK26Q9P289 416 aa19.87■□□□□ 0.77
VARS2-211ENST00000541562 FAM135AQ9P2D6 1515 aa19.86■□□□□ 0.77
VARS2-211ENST00000541562 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
VARS2-211ENST00000541562 CDC42BPAQ5VT25 1732 aa19.85■□□□□ 0.77
VARS2-211ENST00000541562 TRAPPC8Q9Y2L5 1435 aa19.85■□□□□ 0.77
VARS2-211ENST00000541562 DEKP35659 375 aaKnown RBP19.84■□□□□ 0.77
VARS2-211ENST00000541562 FRAT1Q92837 279 aaPredicted RBP19.84■□□□□ 0.77
VARS2-211ENST00000541562 KDM5CP41229 1560 aa19.83■□□□□ 0.77
VARS2-211ENST00000541562 PLA2R1Q13018 1463 aa19.83■□□□□ 0.77
VARS2-211ENST00000541562 SPINK5Q9NQ38 1064 aaPredicted RBP19.83■□□□□ 0.76
VARS2-211ENST00000541562 PPP2R1AP30153 589 aa19.83■□□□□ 0.76
VARS2-211ENST00000541562 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.76
VARS2-211ENST00000541562 RALGAPBQ86X10 1494 aa19.82■□□□□ 0.76
VARS2-211ENST00000541562 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
VARS2-211ENST00000541562 BCAR3O75815 825 aa19.82■□□□□ 0.76
VARS2-211ENST00000541562 ADGRF5Q8IZF2 1346 aa19.81■□□□□ 0.76
VARS2-211ENST00000541562 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
VARS2-211ENST00000541562 A2MP01023 1474 aa19.81■□□□□ 0.76
VARS2-211ENST00000541562 SCAPERQ9BY12 1400 aa19.81■□□□□ 0.76
VARS2-211ENST00000541562 BRD4O60885 1362 aaPredicted RBP19.81■□□□□ 0.76
VARS2-211ENST00000541562 RTN4Q9NQC3 1192 aaKnown RBP19.8■□□□□ 0.76
VARS2-211ENST00000541562 ITSN2Q9NZM3 1697 aa19.8■□□□□ 0.76
VARS2-211ENST00000541562 PDE4AP27815 886 aa19.8■□□□□ 0.76
VARS2-211ENST00000541562 CANXP27824 592 aaKnown RBP19.8■□□□□ 0.76
VARS2-211ENST00000541562 ADGRL2O95490 1459 aa19.8■□□□□ 0.76
VARS2-211ENST00000541562 ERBINQ96RT1 1412 aa19.79■□□□□ 0.76
VARS2-211ENST00000541562 ERICH6BQ5W0A0 696 aa19.79■□□□□ 0.76
VARS2-211ENST00000541562 SAMD9LQ8IVG5 1584 aa19.79■□□□□ 0.76
VARS2-211ENST00000541562 CLUAP1Q96AJ1 413 aa19.78■□□□□ 0.76
VARS2-211ENST00000541562 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
VARS2-211ENST00000541562 SLC12A5Q9H2X9 1139 aa19.78■□□□□ 0.76
VARS2-211ENST00000541562 CFAP65Q6ZU64 1925 aaKnown RBP19.77■□□□□ 0.75
VARS2-211ENST00000541562 ABCA8O94911 1581 aa19.77■□□□□ 0.75
VARS2-211ENST00000541562 RTL5Q5HYW3 569 aaPredicted RBP19.76■□□□□ 0.75
VARS2-211ENST00000541562 TTC37Q6PGP7 1564 aa19.76■□□□□ 0.75
VARS2-211ENST00000541562 RSPH4AQ5TD94 716 aa19.75■□□□□ 0.75
VARS2-211ENST00000541562 IPO9Q96P70 1041 aaKnown RBP19.75■□□□□ 0.75
VARS2-211ENST00000541562 RAPGEF3O95398 923 aa19.74■□□□□ 0.75
VARS2-211ENST00000541562 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
VARS2-211ENST00000541562 ADGBQ8N7X0 1667 aa19.73■□□□□ 0.75
VARS2-211ENST00000541562 PLEKHH1Q9ULM0 1364 aa19.72■□□□□ 0.75
VARS2-211ENST00000541562 FBLN1P23142 703 aa19.72■□□□□ 0.75
VARS2-211ENST00000541562 TNNQ9UQP3 1299 aa19.71■□□□□ 0.75
VARS2-211ENST00000541562 UHRF1BP1Q6BDS2 1440 aa19.71■□□□□ 0.75
VARS2-211ENST00000541562 ARID4BQ4LE39 1312 aaPredicted RBP19.71■□□□□ 0.75
VARS2-211ENST00000541562 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.7■□□□□ 0.74
VARS2-211ENST00000541562 PANK1Q8TE04 598 aa19.7■□□□□ 0.74
VARS2-211ENST00000541562 LRPPRCP42704 1394 aaKnown RBP19.7■□□□□ 0.74
VARS2-211ENST00000541562 PARD3Q8TEW0 1356 aa19.7■□□□□ 0.74
VARS2-211ENST00000541562 GOLGA2Q08379 1002 aa19.69■□□□□ 0.74
VARS2-211ENST00000541562 MLECQ14165 292 aa19.69■□□□□ 0.74
VARS2-211ENST00000541562 CARD14Q9BXL6 1004 aa19.69■□□□□ 0.74
VARS2-211ENST00000541562 ARXQ96QS3 562 aa19.69■□□□□ 0.74
VARS2-211ENST00000541562 COG6Q9Y2V7 657 aa19.69■□□□□ 0.74
VARS2-211ENST00000541562 NEFMP07197 916 aa19.68■□□□□ 0.74
VARS2-211ENST00000541562 AMER1Q5JTC6 1135 aaPredicted RBP19.68■□□□□ 0.74
VARS2-211ENST00000541562 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
VARS2-211ENST00000541562 UGGT1Q9NYU2 1555 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms