RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 PDIA6Q15084 440 aa8.91□□□□□ -0.98
KDM5A-208ENST00000541335 E2F4Q16254 413 aa8.9□□□□□ -0.98
KDM5A-208ENST00000541335 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
KDM5A-208ENST00000541335 DDX12PQ92771 950 aa8.9□□□□□ -0.98
KDM5A-208ENST00000541335 C6orf132Q5T0Z8 1188 aa8.89□□□□□ -0.99
KDM5A-208ENST00000541335 MRPL50Q8N5N7 158 aaKnown RBP8.89□□□□□ -0.99
KDM5A-208ENST00000541335 NBPF3Q9H094 633 aa8.89□□□□□ -0.99
KDM5A-208ENST00000541335 PLA2G2EQ9NZK7 142 aa8.89□□□□□ -0.99
KDM5A-208ENST00000541335 SPDYE16A6NNV3 312 aaPredicted RBP8.88□□□□□ -0.99
KDM5A-208ENST00000541335 RBM33Q96EV2 1170 aaKnown RBP8.88□□□□□ -0.99
KDM5A-208ENST00000541335 WDR70Q9NW82 654 aa8.88□□□□□ -0.99
KDM5A-208ENST00000541335 RABGEF1Q9UJ41 708 aa8.88□□□□□ -0.99
KDM5A-208ENST00000541335 GOLGA8CPA6NN73 597 aa8.87□□□□□ -0.99
KDM5A-208ENST00000541335 THSD4Q6ZMP0 1018 aa8.87□□□□□ -0.99
KDM5A-208ENST00000541335 ARIH1Q9Y4X5 557 aaPredicted RBP8.87□□□□□ -0.99
KDM5A-208ENST00000541335 PTPN5P54829 565 aa8.86□□□□□ -0.99
KDM5A-208ENST00000541335 WNT2BQ93097 391 aa8.86□□□□□ -0.99
KDM5A-208ENST00000541335 NBR1Q14596 966 aa8.85□□□□□ -0.99
KDM5A-208ENST00000541335 EN1Q05925 392 aaPredicted RBP8.84□□□□□ -0.99
KDM5A-208ENST00000541335 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
KDM5A-208ENST00000541335 KIAA1468Q9P260 1216 aa8.83□□□□□ -1
KDM5A-208ENST00000541335 TRIM6-TRIM34B2RNG4 842 aa8.81□□□□□ -1
KDM5A-208ENST00000541335 MAP3K7O43318 606 aa8.81□□□□□ -1
KDM5A-208ENST00000541335 TSR1Q2NL82 804 aaKnown RBP8.81□□□□□ -1
KDM5A-208ENST00000541335 LAPTM4BQ86VI4 370 aa8.81□□□□□ -1
KDM5A-208ENST00000541335 TSHZ2Q9NRE2 1034 aa8.81□□□□□ -1
KDM5A-208ENST00000541335 PRIM1P49642 420 aaKnown RBP8.8□□□□□ -1
KDM5A-208ENST00000541335 ANKK1Q8NFD2 765 aa8.79□□□□□ -1
KDM5A-208ENST00000541335 GRXCR2A6NFK2 248 aa8.78□□□□□ -1
KDM5A-208ENST00000541335 SEPT9Q9UHD8 586 aaPredicted RBP8.78□□□□□ -1
KDM5A-208ENST00000541335 ZFRQ96KR1 1074 aaKnown RBP8.77□□□□□ -1.01
KDM5A-208ENST00000541335 BCAMP50895 628 aa8.76□□□□□ -1.01
KDM5A-208ENST00000541335 TSKSQ9UJT2 592 aa8.76□□□□□ -1.01
KDM5A-208ENST00000541335 SOWAHBA6NEL2 793 aa8.75□□□□□ -1.01
KDM5A-208ENST00000541335 OSBPP22059 807 aa8.75□□□□□ -1.01
KDM5A-208ENST00000541335 FAM98CQ17RN3 349 aaKnown RBP8.75□□□□□ -1.01
KDM5A-208ENST00000541335 PACS2Q86VP3 889 aa8.74□□□□□ -1.01
KDM5A-208ENST00000541335 IFFO2Q5TF58 517 aa8.73□□□□□ -1.01
KDM5A-208ENST00000541335 CDCA7LQ96GN5 454 aa8.73□□□□□ -1.01
KDM5A-208ENST00000541335 FAM198AQ9UFP1 575 aa8.73□□□□□ -1.01
KDM5A-208ENST00000541335 PRSS12P56730 875 aa8.72□□□□□ -1.01
KDM5A-208ENST00000541335 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
KDM5A-208ENST00000541335 CDHR5Q9HBB8 845 aa8.72□□□□□ -1.01
KDM5A-208ENST00000541335 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
KDM5A-208ENST00000541335 ARHGEF1Q92888 912 aaKnown RBP8.7□□□□□ -1.02
KDM5A-208ENST00000541335 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
KDM5A-208ENST00000541335 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
KDM5A-208ENST00000541335 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.69□□□□□ -1.02
KDM5A-208ENST00000541335 SMAPO00193 183 aa8.68□□□□□ -1.02
KDM5A-208ENST00000541335 NYAP1Q6ZVC0 841 aa8.68□□□□□ -1.02
KDM5A-208ENST00000541335 LRCH3Q96II8 777 aa8.68□□□□□ -1.02
KDM5A-208ENST00000541335 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
KDM5A-208ENST00000541335 A0A0G2JS52 829 aa8.66□□□□□ -1.02
KDM5A-208ENST00000541335 NBPF26B4DH59 902 aa8.66□□□□□ -1.02
KDM5A-208ENST00000541335 ITGBL1O95965 494 aaPredicted RBP8.66□□□□□ -1.02
KDM5A-208ENST00000541335 MLLT3P42568 568 aaPredicted RBP8.66□□□□□ -1.02
KDM5A-208ENST00000541335 TATDN2Q93075 761 aa8.66□□□□□ -1.02
KDM5A-208ENST00000541335 NPDC1Q9NQX5 325 aaPredicted RBP8.66□□□□□ -1.02
KDM5A-208ENST00000541335 RBM27Q9P2N5 1060 aaKnown RBP8.66□□□□□ -1.02
KDM5A-208ENST00000541335 TSR3Q9UJK0 312 aaKnown RBP8.66□□□□□ -1.02
KDM5A-208ENST00000541335 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
KDM5A-208ENST00000541335 TTC13Q8NBP0 860 aa8.64□□□□□ -1.03
KDM5A-208ENST00000541335 SAMD7Q7Z3H4 446 aa8.63□□□□□ -1.03
KDM5A-208ENST00000541335 PADI6Q6TGC4 694 aa8.62□□□□□ -1.03
KDM5A-208ENST00000541335 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
KDM5A-208ENST00000541335 RGS20O76081 388 aa8.61□□□□□ -1.03
KDM5A-208ENST00000541335 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
KDM5A-208ENST00000541335 PPP4CP60510 307 aa8.6□□□□□ -1.03
KDM5A-208ENST00000541335 P3H3Q8IVL6 736 aa8.6□□□□□ -1.03
KDM5A-208ENST00000541335 KCNC4Q03721 635 aa8.59□□□□□ -1.03
KDM5A-208ENST00000541335 PTGDRQ13258 359 aa8.56□□□□□ -1.04
KDM5A-208ENST00000541335 SEMA3EO15041 775 aa8.55□□□□□ -1.04
KDM5A-208ENST00000541335 HDGFP51858 240 aaKnown RBP8.55□□□□□ -1.04
KDM5A-208ENST00000541335 EYA1Q99502 592 aa8.55□□□□□ -1.04
KDM5A-208ENST00000541335 SWT1Q5T5J6 900 aaKnown RBP8.54□□□□□ -1.04
KDM5A-208ENST00000541335 RNF40O75150 1001 aa8.53□□□□□ -1.04
KDM5A-208ENST00000541335 TJAP1Q5JTD0 557 aa8.53□□□□□ -1.04
KDM5A-208ENST00000541335 NUTM2FA1L443 756 aa8.52□□□□□ -1.05
KDM5A-208ENST00000541335 APLP1P51693 650 aa8.51□□□□□ -1.05
KDM5A-208ENST00000541335 MTRQ99707 1265 aa8.51□□□□□ -1.05
KDM5A-208ENST00000541335 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
KDM5A-208ENST00000541335 ADGRG1Q9Y653 693 aa8.5□□□□□ -1.05
KDM5A-208ENST00000541335 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
KDM5A-208ENST00000541335 IL21Q9HBE4 155 aa8.49□□□□□ -1.05
KDM5A-208ENST00000541335 TESPA1A2RU30 521 aaPredicted RBP8.48□□□□□ -1.05
KDM5A-208ENST00000541335 FCHSD2O94868 740 aa8.48□□□□□ -1.05
KDM5A-208ENST00000541335 DNAJB2P25686 324 aa8.47□□□□□ -1.05
KDM5A-208ENST00000541335 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
KDM5A-208ENST00000541335 ZNF516Q92618 1163 aa8.47□□□□□ -1.05
KDM5A-208ENST00000541335 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
KDM5A-208ENST00000541335 HAP1P54257 671 aaPredicted RBP8.46□□□□□ -1.06
KDM5A-208ENST00000541335 FAM161AQ3B820 660 aa8.46□□□□□ -1.06
KDM5A-208ENST00000541335 SLC4A3P48751 1232 aa8.45□□□□□ -1.06
KDM5A-208ENST00000541335 TMEM134Q9H6X4 195 aa8.45□□□□□ -1.06
KDM5A-208ENST00000541335 RCCD1A6NED2 376 aa8.44□□□□□ -1.06
KDM5A-208ENST00000541335 RBM26Q5T8P6 1007 aaKnown RBP8.44□□□□□ -1.06
KDM5A-208ENST00000541335 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
KDM5A-208ENST00000541335 COPS2P61201 443 aa8.42□□□□□ -1.06
KDM5A-208ENST00000541335 HIC1Q14526 733 aa8.42□□□□□ -1.06
KDM5A-208ENST00000541335 SMYD5Q6GMV2 418 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms