RNA–Protein interactions for RNA: ENST00000541168.1

SMCO2-205, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 3

Gene SMCO2, Length 922 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-205ENST00000541168 DPYSL4O14531 572 aa15.41■□□□□ 0.06
SMCO2-205ENST00000541168 IFFO2Q5TF58 517 aa15.37■□□□□ 0.05
SMCO2-205ENST00000541168 EPAS1Q99814 870 aa15.37■□□□□ 0.05
SMCO2-205ENST00000541168 ANKK1Q8NFD2 765 aa15.36■□□□□ 0.05
SMCO2-205ENST00000541168 BBXQ8WY36 941 aaPredicted RBP15.36■□□□□ 0.05
SMCO2-205ENST00000541168 C6orf132Q5T0Z8 1188 aa15.33■□□□□ 0.04
SMCO2-205ENST00000541168 LAPTM4BQ86VI4 370 aa15.31■□□□□ 0.04
SMCO2-205ENST00000541168 KIAA1468Q9P260 1216 aa15.31■□□□□ 0.04
SMCO2-205ENST00000541168 DDX12PQ92771 950 aa15.29■□□□□ 0.04
SMCO2-205ENST00000541168 RBM33Q96EV2 1170 aaKnown RBP15.29■□□□□ 0.04
SMCO2-205ENST00000541168 A0A0G2JS52 829 aa15.28■□□□□ 0.04
SMCO2-205ENST00000541168 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
SMCO2-205ENST00000541168 BCAMP50895 628 aa15.28■□□□□ 0.04
SMCO2-205ENST00000541168 RGS20O76081 388 aa15.26■□□□□ 0.03
SMCO2-205ENST00000541168 ZFRQ96KR1 1074 aaKnown RBP15.26■□□□□ 0.03
SMCO2-205ENST00000541168 SOWAHBA6NEL2 793 aa15.25■□□□□ 0.03
SMCO2-205ENST00000541168 TRIM6-TRIM34B2RNG4 842 aa15.25■□□□□ 0.03
SMCO2-205ENST00000541168 SEPT9Q9UHD8 586 aaPredicted RBP15.25■□□□□ 0.03
SMCO2-205ENST00000541168 NBR1Q14596 966 aa15.22■□□□□ 0.03
SMCO2-205ENST00000541168 PDIA6Q15084 440 aa15.22■□□□□ 0.03
SMCO2-205ENST00000541168 SPRYD3Q8NCJ5 442 aa15.21■□□□□ 0.03
SMCO2-205ENST00000541168 EN1Q05925 392 aaPredicted RBP15.2■□□□□ 0.02
SMCO2-205ENST00000541168 ITGBL1O95965 494 aaPredicted RBP15.19■□□□□ 0.02
SMCO2-205ENST00000541168 FAM98CQ17RN3 349 aaKnown RBP15.19■□□□□ 0.02
SMCO2-205ENST00000541168 MAP3K7O43318 606 aa15.18■□□□□ 0.02
SMCO2-205ENST00000541168 NYAP1Q6ZVC0 841 aa15.18■□□□□ 0.02
SMCO2-205ENST00000541168 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.18■□□□□ 0.02
SMCO2-205ENST00000541168 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
SMCO2-205ENST00000541168 TSR1Q2NL82 804 aaKnown RBP15.16■□□□□ 0.02
SMCO2-205ENST00000541168 WBP1LQ9NX94 342 aa15.16■□□□□ 0.02
SMCO2-205ENST00000541168 LRCH3Q96II8 777 aa15.12■□□□□ 0.01
SMCO2-205ENST00000541168 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.12■□□□□ 0.01
SMCO2-205ENST00000541168 TSKSQ9UJT2 592 aa15.12■□□□□ 0.01
SMCO2-205ENST00000541168 E2F4Q16254 413 aa15.11■□□□□ 0.01
SMCO2-205ENST00000541168 PACS2Q86VP3 889 aa15.11■□□□□ 0.01
SMCO2-205ENST00000541168 IRX2Q9BZI1 471 aaPredicted RBP15.1■□□□□ 0.01
SMCO2-205ENST00000541168 HPS5Q9UPZ3 1129 aa15.1■□□□□ 0.01
SMCO2-205ENST00000541168 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
SMCO2-205ENST00000541168 TSR3Q9UJK0 312 aaKnown RBP15.09■□□□□ 0.01
SMCO2-205ENST00000541168 KCNC4Q03721 635 aa15.06■□□□□ 0
SMCO2-205ENST00000541168 ARIH1Q9Y4X5 557 aaPredicted RBP15.06■□□□□ 0
SMCO2-205ENST00000541168 PAXIP1Q6ZW49 1069 aaPredicted RBP15.05■□□□□ -0
SMCO2-205ENST00000541168 CFAP44Q96MT7 982 aa15.05■□□□□ -0
SMCO2-205ENST00000541168 WDR70Q9NW82 654 aa15.05■□□□□ -0
SMCO2-205ENST00000541168 CDCA7LQ96GN5 454 aa15.04■□□□□ -0
SMCO2-205ENST00000541168 GRXCR2A6NFK2 248 aa15.03■□□□□ -0
SMCO2-205ENST00000541168 PRIM1P49642 420 aaKnown RBP15.03■□□□□ -0
SMCO2-205ENST00000541168 PRSS12P56730 875 aa15.02■□□□□ -0
SMCO2-205ENST00000541168 CERKQ8TCT0 537 aa15.02■□□□□ -0
SMCO2-205ENST00000541168 FAM198AQ9UFP1 575 aa15□□□□□ -0.01
SMCO2-205ENST00000541168 SMAPO00193 183 aa14.99□□□□□ -0.01
SMCO2-205ENST00000541168 RTN4Q9NQC3 1192 aaKnown RBP14.98□□□□□ -0.01
SMCO2-205ENST00000541168 PPP4CP60510 307 aa14.97□□□□□ -0.01
SMCO2-205ENST00000541168 NBPF26B4DH59 902 aa14.96□□□□□ -0.01
SMCO2-205ENST00000541168 SAMD7Q7Z3H4 446 aa14.96□□□□□ -0.01
SMCO2-205ENST00000541168 CDHR5Q9HBB8 845 aa14.95□□□□□ -0.02
SMCO2-205ENST00000541168 TATDN2Q93075 761 aa14.94□□□□□ -0.02
SMCO2-205ENST00000541168 PNMA3Q9UL41 463 aa14.94□□□□□ -0.02
SMCO2-205ENST00000541168 C3orf80F5H4A9 247 aa14.93□□□□□ -0.02
SMCO2-205ENST00000541168 OSBPP22059 807 aa14.93□□□□□ -0.02
SMCO2-205ENST00000541168 RBM27Q9P2N5 1060 aaKnown RBP14.9□□□□□ -0.02
SMCO2-205ENST00000541168 NUDT18Q6ZVK8 323 aa14.86□□□□□ -0.03
SMCO2-205ENST00000541168 TJAP1Q5JTD0 557 aa14.85□□□□□ -0.03
SMCO2-205ENST00000541168 RNF40O75150 1001 aa14.83□□□□□ -0.04
SMCO2-205ENST00000541168 MTRQ99707 1265 aa14.82□□□□□ -0.04
SMCO2-205ENST00000541168 HDGFP51858 240 aaKnown RBP14.81□□□□□ -0.04
SMCO2-205ENST00000541168 IL21Q9HBE4 155 aa14.81□□□□□ -0.04
SMCO2-205ENST00000541168 PADI6Q6TGC4 694 aa14.8□□□□□ -0.04
SMCO2-205ENST00000541168 TTC13Q8NBP0 860 aa14.8□□□□□ -0.04
SMCO2-205ENST00000541168 Q6ZNB5 142 aa14.79□□□□□ -0.04
SMCO2-205ENST00000541168 NPDC1Q9NQX5 325 aaPredicted RBP14.78□□□□□ -0.04
SMCO2-205ENST00000541168 APLP1P51693 650 aa14.76□□□□□ -0.05
SMCO2-205ENST00000541168 SWT1Q5T5J6 900 aaKnown RBP14.74□□□□□ -0.05
SMCO2-205ENST00000541168 NECTIN2Q92692 538 aa14.74□□□□□ -0.05
SMCO2-205ENST00000541168 ZNF516Q92618 1163 aa14.72□□□□□ -0.05
SMCO2-205ENST00000541168 LAPTM4AQ15012 233 aa14.71□□□□□ -0.05
SMCO2-205ENST00000541168 SLF2Q8IX21 1173 aa14.71□□□□□ -0.05
SMCO2-205ENST00000541168 PPP1R18Q6NYC8 613 aa14.7□□□□□ -0.06
SMCO2-205ENST00000541168 PRKD2Q9BZL6 878 aa14.7□□□□□ -0.06
SMCO2-205ENST00000541168 ARHGEF1Q92888 912 aaKnown RBP14.69□□□□□ -0.06
SMCO2-205ENST00000541168 MLLT3P42568 568 aaPredicted RBP14.68□□□□□ -0.06
SMCO2-205ENST00000541168 TSHZ2Q9NRE2 1034 aa14.68□□□□□ -0.06
SMCO2-205ENST00000541168 KCNV2Q8TDN2 545 aa14.67□□□□□ -0.06
SMCO2-205ENST00000541168 EYA1Q99502 592 aa14.67□□□□□ -0.06
SMCO2-205ENST00000541168 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
SMCO2-205ENST00000541168 GFRA3O60609 400 aa14.65□□□□□ -0.06
SMCO2-205ENST00000541168 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.65□□□□□ -0.06
SMCO2-205ENST00000541168 COPS2P61201 443 aa14.64□□□□□ -0.07
SMCO2-205ENST00000541168 NKX2-3Q8TAU0 364 aa14.63□□□□□ -0.07
SMCO2-205ENST00000541168 V9GY48 417 aaPredicted RBP14.62□□□□□ -0.07
SMCO2-205ENST00000541168 PTGDRQ13258 359 aa14.6□□□□□ -0.07
SMCO2-205ENST00000541168 GGCXP38435 758 aa14.58□□□□□ -0.08
SMCO2-205ENST00000541168 PRR14Q9BWN1 585 aa14.58□□□□□ -0.08
SMCO2-205ENST00000541168 LCE2BO14633 110 aa14.56□□□□□ -0.08
SMCO2-205ENST00000541168 DNAJB2P25686 324 aa14.56□□□□□ -0.08
SMCO2-205ENST00000541168 NRG2O14511 850 aaPredicted RBP14.55□□□□□ -0.08
SMCO2-205ENST00000541168 ZPR1O75312 459 aa14.55□□□□□ -0.08
SMCO2-205ENST00000541168 RBM46Q8TBY0 533 aaKnown RBP14.55□□□□□ -0.08
SMCO2-205ENST00000541168 PCDHB3Q9Y5E6 796 aa14.55□□□□□ -0.08
SMCO2-205ENST00000541168 TRAF7Q6Q0C0 670 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms