RNA–Protein interactions for RNA: ENST00000541124.5

PSME3-203, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-203ENST00000541124 KIAA1107Q9UPP5 1409 aa18.39■□□□□ 0.54
PSME3-203ENST00000541124 GSE1Q14687 1217 aa18.39■□□□□ 0.54
PSME3-203ENST00000541124 KNSTRNQ9Y448 316 aa18.39■□□□□ 0.54
PSME3-203ENST00000541124 ANKRD50Q9ULJ7 1429 aa18.39■□□□□ 0.53
PSME3-203ENST00000541124 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
PSME3-203ENST00000541124 FRAT2O75474 233 aaPredicted RBP18.39■□□□□ 0.53
PSME3-203ENST00000541124 BRD4O60885 1362 aaPredicted RBP18.38■□□□□ 0.53
PSME3-203ENST00000541124 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
PSME3-203ENST00000541124 ARHGEF11O15085 1522 aa18.34■□□□□ 0.53
PSME3-203ENST00000541124 MS4A1P11836 297 aa18.33■□□□□ 0.53
PSME3-203ENST00000541124 PDE3BQ13370 1112 aa18.33■□□□□ 0.53
PSME3-203ENST00000541124 IQGAP2Q13576 1575 aa18.33■□□□□ 0.53
PSME3-203ENST00000541124 TMF1P82094 1093 aa18.33■□□□□ 0.52
PSME3-203ENST00000541124 PZPP20742 1482 aa18.32■□□□□ 0.52
PSME3-203ENST00000541124 BCORL1Q5H9F3 1711 aa18.32■□□□□ 0.52
PSME3-203ENST00000541124 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
PSME3-203ENST00000541124 ROCK1Q13464 1354 aa18.31■□□□□ 0.52
PSME3-203ENST00000541124 BCL2L13Q9BXK5 485 aa18.31■□□□□ 0.52
PSME3-203ENST00000541124 USP35Q9P2H5 1018 aa18.31■□□□□ 0.52
PSME3-203ENST00000541124 KIF21AQ7Z4S6 1674 aa18.3■□□□□ 0.52
PSME3-203ENST00000541124 BCAR3O75815 825 aa18.3■□□□□ 0.52
PSME3-203ENST00000541124 APAF1O14727 1248 aa18.3■□□□□ 0.52
PSME3-203ENST00000541124 GCC2Q8IWJ2 1684 aa18.29■□□□□ 0.52
PSME3-203ENST00000541124 GZF1Q9H116 711 aaPredicted RBP18.29■□□□□ 0.52
PSME3-203ENST00000541124 RRP7AQ9Y3A4 280 aaKnown RBP18.29■□□□□ 0.52
PSME3-203ENST00000541124 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
PSME3-203ENST00000541124 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
PSME3-203ENST00000541124 CLUAP1Q96AJ1 413 aa18.28■□□□□ 0.52
PSME3-203ENST00000541124 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
PSME3-203ENST00000541124 CAMSAP2Q08AD1 1489 aa18.28■□□□□ 0.52
PSME3-203ENST00000541124 PLB1Q6P1J6 1458 aa18.28■□□□□ 0.52
PSME3-203ENST00000541124 CHGAP10645 457 aaKnown RBP18.26■□□□□ 0.51
PSME3-203ENST00000541124 COG6Q9Y2V7 657 aa18.26■□□□□ 0.51
PSME3-203ENST00000541124 ARID4BQ4LE39 1312 aaPredicted RBP18.26■□□□□ 0.51
PSME3-203ENST00000541124 CCDC144AA2RUR9 1427 aa18.25■□□□□ 0.51
PSME3-203ENST00000541124 JPH4Q96JJ6 628 aa18.25■□□□□ 0.51
PSME3-203ENST00000541124 WDR62O43379 1518 aa18.25■□□□□ 0.51
PSME3-203ENST00000541124 DISP3Q9P2K9 1392 aa18.25■□□□□ 0.51
PSME3-203ENST00000541124 LRPPRCP42704 1394 aaKnown RBP18.24■□□□□ 0.51
PSME3-203ENST00000541124 CENPQQ7L2Z9 268 aaPredicted RBP18.24■□□□□ 0.51
PSME3-203ENST00000541124 TARBP1Q13395 1621 aaKnown RBP18.24■□□□□ 0.51
PSME3-203ENST00000541124 PANK1Q8TE04 598 aa18.23■□□□□ 0.51
PSME3-203ENST00000541124 NUP153P49790 1475 aaKnown RBP18.22■□□□□ 0.51
PSME3-203ENST00000541124 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.5
PSME3-203ENST00000541124 C9orf84Q5VXU9 1444 aa18.2■□□□□ 0.5
PSME3-203ENST00000541124 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
PSME3-203ENST00000541124 PPP2R1AP30153 589 aa18.2■□□□□ 0.5
PSME3-203ENST00000541124 POGKQ9P215 609 aa18.19■□□□□ 0.5
PSME3-203ENST00000541124 SPINK5Q9NQ38 1064 aaPredicted RBP18.18■□□□□ 0.5
PSME3-203ENST00000541124 DUSP27Q5VZP5 1158 aa18.17■□□□□ 0.5
PSME3-203ENST00000541124 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
PSME3-203ENST00000541124 C8orf34Q49A92 452 aa18.17■□□□□ 0.5
PSME3-203ENST00000541124 PBRM1Q86U86 1689 aa18.17■□□□□ 0.5
PSME3-203ENST00000541124 GPATCH8Q9UKJ3 1502 aaKnown RBP18.16■□□□□ 0.5
PSME3-203ENST00000541124 PLEKHH1Q9ULM0 1364 aa18.16■□□□□ 0.5
PSME3-203ENST00000541124 UPF2Q9HAU5 1272 aaKnown RBP18.15■□□□□ 0.5
PSME3-203ENST00000541124 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
PSME3-203ENST00000541124 DNMT1P26358 1616 aaKnown RBP18.15■□□□□ 0.5
PSME3-203ENST00000541124 PARD3Q8TEW0 1356 aa18.15■□□□□ 0.5
PSME3-203ENST00000541124 KIAA0586Q9BVV6 1533 aa18.15■□□□□ 0.5
PSME3-203ENST00000541124 SEC24BO95487 1268 aa18.14■□□□□ 0.5
PSME3-203ENST00000541124 RALGAPBQ86X10 1494 aa18.14■□□□□ 0.49
PSME3-203ENST00000541124 IGHDP01880 384 aa18.14■□□□□ 0.49
PSME3-203ENST00000541124 KDM5CP41229 1560 aa18.13■□□□□ 0.49
PSME3-203ENST00000541124 TESK2Q96S53 571 aa18.12■□□□□ 0.49
PSME3-203ENST00000541124 BECN1Q14457 450 aa18.12■□□□□ 0.49
PSME3-203ENST00000541124 DMRT2Q9Y5R5 561 aa18.12■□□□□ 0.49
PSME3-203ENST00000541124 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
PSME3-203ENST00000541124 TNNQ9UQP3 1299 aa18.1■□□□□ 0.49
PSME3-203ENST00000541124 WASHC2CQ9Y4E1 1318 aa18.09■□□□□ 0.49
PSME3-203ENST00000541124 ERBINQ96RT1 1412 aa18.09■□□□□ 0.49
PSME3-203ENST00000541124 KIAA0556O60303 1618 aa18.09■□□□□ 0.49
PSME3-203ENST00000541124 CENPJQ9HC77 1338 aaPredicted RBP18.08■□□□□ 0.48
PSME3-203ENST00000541124 MFAP1P55081 439 aaKnown RBP18.08■□□□□ 0.48
PSME3-203ENST00000541124 SAFB2Q14151 953 aaKnown RBP eCLIP18.07■□□□□ 0.48
PSME3-203ENST00000541124 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
PSME3-203ENST00000541124 KIF14Q15058 1648 aa18.07■□□□□ 0.48
PSME3-203ENST00000541124 MBD5Q9P267 1494 aa18.07■□□□□ 0.48
PSME3-203ENST00000541124 RAPGEF6Q8TEU7 1601 aa18.07■□□□□ 0.48
PSME3-203ENST00000541124 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
PSME3-203ENST00000541124 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
PSME3-203ENST00000541124 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
PSME3-203ENST00000541124 FOXD4L1Q9NU39 408 aa18.05■□□□□ 0.48
PSME3-203ENST00000541124 CARMIL2Q6F5E8 1435 aa18.05■□□□□ 0.48
PSME3-203ENST00000541124 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
PSME3-203ENST00000541124 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
PSME3-203ENST00000541124 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
PSME3-203ENST00000541124 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.47
PSME3-203ENST00000541124 MORC1Q86VD1 984 aa18.01■□□□□ 0.47
PSME3-203ENST00000541124 HSP90AA1P07900 732 aaKnown RBP18.01■□□□□ 0.47
PSME3-203ENST00000541124 CFAP70Q5T0N1 1121 aa18.01■□□□□ 0.47
PSME3-203ENST00000541124 CDCA8Q53HL2 280 aa18■□□□□ 0.47
PSME3-203ENST00000541124 UHRF1BP1Q6BDS2 1440 aa18■□□□□ 0.47
PSME3-203ENST00000541124 E9PSI1 815 aa17.99■□□□□ 0.47
PSME3-203ENST00000541124 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
PSME3-203ENST00000541124 TRAK1Q9UPV9 953 aa17.99■□□□□ 0.47
PSME3-203ENST00000541124 ERCC6Q03468 1493 aa17.99■□□□□ 0.47
PSME3-203ENST00000541124 AMER1Q5JTC6 1135 aaPredicted RBP17.99■□□□□ 0.47
PSME3-203ENST00000541124 PDZRN3Q9UPQ7 1066 aa17.97■□□□□ 0.47
PSME3-203ENST00000541124 U2AF1L5P0DN76 240 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms