RNA–Protein interactions for RNA: ENST00000540999.5

TCF4-207, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-207ENST00000540999 ARHGAP5Q13017 1502 aa12.11□□□□□ -0.47
TCF4-207ENST00000540999 TRIM52Q96A61 297 aa12.11□□□□□ -0.47
TCF4-207ENST00000540999 CNPY4Q8N129 248 aa12.1□□□□□ -0.47
TCF4-207ENST00000540999 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.1□□□□□ -0.47
TCF4-207ENST00000540999 MYO5CQ9NQX4 1742 aa12.1□□□□□ -0.47
TCF4-207ENST00000540999 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
TCF4-207ENST00000540999 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 CROCC2H7BZ55 1655 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 MBD5Q9P267 1494 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 CYB5RLQ6IPT4 315 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 TICAM2Q86XR7 235 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 NCOA1Q15788 1441 aa12.09□□□□□ -0.47
TCF4-207ENST00000540999 ROCK1Q13464 1354 aa12.08□□□□□ -0.47
TCF4-207ENST00000540999 WDR7Q9Y4E6 1490 aa12.08□□□□□ -0.48
TCF4-207ENST00000540999 ASXL2Q76L83 1435 aa12.08□□□□□ -0.48
TCF4-207ENST00000540999 PRDM10Q9NQV6 1147 aa12.08□□□□□ -0.48
TCF4-207ENST00000540999 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
TCF4-207ENST00000540999 FOXD1Q16676 465 aa12.07□□□□□ -0.48
TCF4-207ENST00000540999 SECISBP2LQ93073 1101 aaKnown RBP12.07□□□□□ -0.48
TCF4-207ENST00000540999 IL27Q8NEV9 243 aa12.07□□□□□ -0.48
TCF4-207ENST00000540999 DENND4BO75064 1496 aaPredicted RBP12.07□□□□□ -0.48
TCF4-207ENST00000540999 C9orf84Q5VXU9 1444 aa12.06□□□□□ -0.48
TCF4-207ENST00000540999 PUS7Q96PZ0 661 aaKnown RBP12.06□□□□□ -0.48
TCF4-207ENST00000540999 ARHGEF12Q9NZN5 1544 aa12.06□□□□□ -0.48
TCF4-207ENST00000540999 ADGBQ8N7X0 1667 aa12.06□□□□□ -0.48
TCF4-207ENST00000540999 CHRM1P11229 460 aaPredicted RBP12.06□□□□□ -0.48
TCF4-207ENST00000540999 PLCH2O75038 1416 aa12.05□□□□□ -0.48
TCF4-207ENST00000540999 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
TCF4-207ENST00000540999 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
TCF4-207ENST00000540999 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
TCF4-207ENST00000540999 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
TCF4-207ENST00000540999 ZNF592Q92610 1267 aa12.05□□□□□ -0.48
TCF4-207ENST00000540999 ANKRD30AQ9BXX3 1397 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 MPHOSPH9Q99550 1183 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 RIMBP3CA6NJZ7 1639 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 RIMBP3BA6NNM3 1639 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 RIMBP3Q9UFD9 1639 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 ADGRL2O95490 1459 aa12.04□□□□□ -0.48
TCF4-207ENST00000540999 ARHGEF5Q12774 1597 aa12.03□□□□□ -0.48
TCF4-207ENST00000540999 EFCAB2Q5VUJ9 269 aa12.03□□□□□ -0.48
TCF4-207ENST00000540999 CCDC141Q6ZP82 1450 aa12.03□□□□□ -0.48
TCF4-207ENST00000540999 TMED8Q6PL24 325 aaPredicted RBP12.02□□□□□ -0.49
TCF4-207ENST00000540999 SHANK2Q9UPX8 1470 aa12.01□□□□□ -0.49
TCF4-207ENST00000540999 KIF15Q9NS87 1388 aa12.01□□□□□ -0.49
TCF4-207ENST00000540999 ANKRD50Q9ULJ7 1429 aa12.01□□□□□ -0.49
TCF4-207ENST00000540999 TRAPPC8Q9Y2L5 1435 aa12.01□□□□□ -0.49
TCF4-207ENST00000540999 AFAP1Q8N556 730 aa12□□□□□ -0.49
TCF4-207ENST00000540999 ABCA9Q8IUA7 1624 aa12□□□□□ -0.49
TCF4-207ENST00000540999 SLC4A1APQ9BWU0 796 aaKnown RBP11.99□□□□□ -0.49
TCF4-207ENST00000540999 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
TCF4-207ENST00000540999 KDM2AQ9Y2K7 1162 aa11.99□□□□□ -0.49
TCF4-207ENST00000540999 ABCC1P33527 1531 aa11.98□□□□□ -0.49
TCF4-207ENST00000540999 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
TCF4-207ENST00000540999 FANCAO15360 1455 aa11.98□□□□□ -0.49
TCF4-207ENST00000540999 ZNF316A6NFI3 1004 aaPredicted RBP11.97□□□□□ -0.49
TCF4-207ENST00000540999 PZPP20742 1482 aa11.97□□□□□ -0.49
TCF4-207ENST00000540999 RNF216Q9NWF9 866 aaPredicted RBP11.97□□□□□ -0.49
TCF4-207ENST00000540999 GTF2E1P29083 439 aaPredicted RBP11.96□□□□□ -0.49
TCF4-207ENST00000540999 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.5
TCF4-207ENST00000540999 CLSTN1O94985 981 aa11.96□□□□□ -0.5
TCF4-207ENST00000540999 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
TCF4-207ENST00000540999 NUP155O75694 1391 aa11.94□□□□□ -0.5
TCF4-207ENST00000540999 KCNG1Q9UIX4 513 aa11.94□□□□□ -0.5
TCF4-207ENST00000540999 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
TCF4-207ENST00000540999 ARAP3Q8WWN8 1544 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 ADGRL1O94910 1474 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 TONSLQ96HA7 1378 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 PKD2Q13563 968 aa11.93□□□□□ -0.5
TCF4-207ENST00000540999 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.93□□□□□ -0.5
TCF4-207ENST00000540999 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
TCF4-207ENST00000540999 SENP3Q9H4L4 574 aaPredicted RBP11.92□□□□□ -0.5
TCF4-207ENST00000540999 SPAG9O60271 1321 aaKnown RBP11.92□□□□□ -0.5
TCF4-207ENST00000540999 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
TCF4-207ENST00000540999 MSH5O43196 834 aa11.91□□□□□ -0.5
TCF4-207ENST00000540999 CANXP27824 592 aaKnown RBP11.9□□□□□ -0.5
TCF4-207ENST00000540999 DIEXFQ68CQ4 756 aaKnown RBP11.9□□□□□ -0.5
TCF4-207ENST00000540999 PLXNC1O60486 1568 aa11.9□□□□□ -0.5
TCF4-207ENST00000540999 ZFYVE16Q7Z3T8 1539 aa11.89□□□□□ -0.51
TCF4-207ENST00000540999 HIRIP3Q9BW71 556 aaPredicted RBP11.89□□□□□ -0.51
TCF4-207ENST00000540999 SUPT16HQ9Y5B9 1047 aaKnown RBP11.88□□□□□ -0.51
TCF4-207ENST00000540999 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
TCF4-207ENST00000540999 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
TCF4-207ENST00000540999 PSMD1Q99460 953 aa11.87□□□□□ -0.51
TCF4-207ENST00000540999 DUOX2Q9NRD8 1548 aa11.86□□□□□ -0.51
TCF4-207ENST00000540999 FAM69CQ0P6D2 419 aa11.86□□□□□ -0.51
TCF4-207ENST00000540999 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
TCF4-207ENST00000540999 ATP7AQ04656 1500 aa11.86□□□□□ -0.51
TCF4-207ENST00000540999 FAM135AQ9P2D6 1515 aa11.86□□□□□ -0.51
TCF4-207ENST00000540999 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
TCF4-207ENST00000540999 KDM5DQ9BY66 1539 aa11.85□□□□□ -0.51
TCF4-207ENST00000540999 RPRD2Q5VT52 1461 aaKnown RBP11.85□□□□□ -0.51
TCF4-207ENST00000540999 INO80Q9ULG1 1556 aaPredicted RBP11.85□□□□□ -0.51
TCF4-207ENST00000540999 CNGB1Q14028 1251 aaPredicted RBP11.84□□□□□ -0.51
TCF4-207ENST00000540999 PLCD4Q9BRC7 762 aa11.84□□□□□ -0.51
TCF4-207ENST00000540999 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
TCF4-207ENST00000540999 TSPOAP1O95153 1857 aa11.84□□□□□ -0.51
TCF4-207ENST00000540999 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
TCF4-207ENST00000540999 UNC13BO14795 1591 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms