RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 EID1Q9Y6B2 187 aa12.45□□□□□ -0.42
TTC39C-203ENST00000540918 VGFO15240 615 aaPredicted RBP12.45□□□□□ -0.42
TTC39C-203ENST00000540918 HSP90AA1P07900 732 aaKnown RBP12.44□□□□□ -0.42
TTC39C-203ENST00000540918 IQGAP2Q13576 1575 aa12.44□□□□□ -0.42
TTC39C-203ENST00000540918 APBB1O00213 710 aa12.43□□□□□ -0.42
TTC39C-203ENST00000540918 NUTM2GQ5VZR2 741 aa12.43□□□□□ -0.42
TTC39C-203ENST00000540918 NLRP13Q86W25 1043 aa12.43□□□□□ -0.42
TTC39C-203ENST00000540918 NAIPQ13075 1403 aa12.43□□□□□ -0.42
TTC39C-203ENST00000540918 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
TTC39C-203ENST00000540918 C11orf95C9JLR9 678 aaPredicted RBP12.42□□□□□ -0.42
TTC39C-203ENST00000540918 RALBP1Q15311 655 aa12.42□□□□□ -0.42
TTC39C-203ENST00000540918 GGNBP2Q9H3C7 697 aa12.41□□□□□ -0.42
TTC39C-203ENST00000540918 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
TTC39C-203ENST00000540918 TCERG1O14776 1098 aaKnown RBP12.41□□□□□ -0.42
TTC39C-203ENST00000540918 DAPK1P53355 1430 aa12.41□□□□□ -0.42
TTC39C-203ENST00000540918 RCAN3Q9UKA8 241 aa12.4□□□□□ -0.42
TTC39C-203ENST00000540918 HFM1A2PYH4 1435 aa12.4□□□□□ -0.43
TTC39C-203ENST00000540918 APAF1O14727 1248 aa12.39□□□□□ -0.43
TTC39C-203ENST00000540918 RBM33Q96EV2 1170 aaKnown RBP12.39□□□□□ -0.43
TTC39C-203ENST00000540918 SLC26A8Q96RN1 970 aa12.39□□□□□ -0.43
TTC39C-203ENST00000540918 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
TTC39C-203ENST00000540918 SLC12A5Q9H2X9 1139 aa12.39□□□□□ -0.43
TTC39C-203ENST00000540918 CCDC7Q96M83 1385 aa12.39□□□□□ -0.43
TTC39C-203ENST00000540918 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
TTC39C-203ENST00000540918 PTPRKQ15262 1439 aa12.38□□□□□ -0.43
TTC39C-203ENST00000540918 CEBPAP49715 358 aaPredicted RBP12.38□□□□□ -0.43
TTC39C-203ENST00000540918 FBXO31Q5XUX0 539 aaPredicted RBP12.38□□□□□ -0.43
TTC39C-203ENST00000540918 MYH16Q9H6N6 1097 aa12.38□□□□□ -0.43
TTC39C-203ENST00000540918 BIVM-ERCC5R4GMW8 1640 aa12.38□□□□□ -0.43
TTC39C-203ENST00000540918 CSB-PGBD3P0DP91 1061 aa12.37□□□□□ -0.43
TTC39C-203ENST00000540918 TXNDC2Q86VQ3 553 aa12.37□□□□□ -0.43
TTC39C-203ENST00000540918 ZNF330Q9Y3S2 320 aaPredicted RBP12.37□□□□□ -0.43
TTC39C-203ENST00000540918 ABCC5O15440 1437 aa12.36□□□□□ -0.43
TTC39C-203ENST00000540918 MAGI1Q96QZ7 1491 aaPredicted RBP12.36□□□□□ -0.43
TTC39C-203ENST00000540918 EHBP1L1Q8N3D4 1523 aa12.36□□□□□ -0.43
TTC39C-203ENST00000540918 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
TTC39C-203ENST00000540918 CENPJQ9HC77 1338 aaPredicted RBP12.36□□□□□ -0.43
TTC39C-203ENST00000540918 WDR97A6NE52 1622 aa12.35□□□□□ -0.43
TTC39C-203ENST00000540918 AMPHP49418 695 aa12.35□□□□□ -0.43
TTC39C-203ENST00000540918 MIA2Q96PC5 1412 aa12.35□□□□□ -0.43
TTC39C-203ENST00000540918 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
TTC39C-203ENST00000540918 TPRNQ4KMQ1 711 aa12.35□□□□□ -0.43
TTC39C-203ENST00000540918 THOC2Q8NI27 1593 aaKnown RBP12.34□□□□□ -0.43
TTC39C-203ENST00000540918 PMFBP1Q8TBY8 1022 aa12.34□□□□□ -0.43
TTC39C-203ENST00000540918 HMOX1P09601 288 aa12.34□□□□□ -0.43
TTC39C-203ENST00000540918 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
TTC39C-203ENST00000540918 EVC2Q86UK5 1308 aa12.33□□□□□ -0.43
TTC39C-203ENST00000540918 GOLGA2Q08379 1002 aa12.33□□□□□ -0.44
TTC39C-203ENST00000540918 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
TTC39C-203ENST00000540918 RTF1Q92541 710 aaKnown RBP12.33□□□□□ -0.44
TTC39C-203ENST00000540918 CDCA7LQ96GN5 454 aa12.33□□□□□ -0.44
TTC39C-203ENST00000540918 TAOK2Q9UL54 1235 aa12.32□□□□□ -0.44
TTC39C-203ENST00000540918 KIAA1107Q9UPP5 1409 aa12.32□□□□□ -0.44
TTC39C-203ENST00000540918 ADAMTS8Q9UP79 889 aa12.31□□□□□ -0.44
TTC39C-203ENST00000540918 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
TTC39C-203ENST00000540918 ITPRIPQ8IWB1 547 aa12.3□□□□□ -0.44
TTC39C-203ENST00000540918 CD109Q6YHK3 1445 aa12.3□□□□□ -0.44
TTC39C-203ENST00000540918 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
TTC39C-203ENST00000540918 SMC4Q9NTJ3 1288 aa12.29□□□□□ -0.44
TTC39C-203ENST00000540918 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
TTC39C-203ENST00000540918 NCOA1Q15788 1441 aa12.29□□□□□ -0.44
TTC39C-203ENST00000540918 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
TTC39C-203ENST00000540918 CUL7Q14999 1698 aa12.29□□□□□ -0.44
TTC39C-203ENST00000540918 ATP10BO94823 1461 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 SUPT6HQ7KZ85 1726 aaKnown RBP12.28□□□□□ -0.44
TTC39C-203ENST00000540918 CGNL1Q0VF96 1302 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 MTHFSP49914 203 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 SLC4A10Q6U841 1118 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 COG3Q96JB2 828 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 KIF21AQ7Z4S6 1674 aa12.28□□□□□ -0.44
TTC39C-203ENST00000540918 PLEKHH2Q8IVE3 1493 aa12.27□□□□□ -0.44
TTC39C-203ENST00000540918 CCDC9Q9Y3X0 531 aaKnown RBP12.27□□□□□ -0.44
TTC39C-203ENST00000540918 CABP1Q9NZU7 370 aa12.27□□□□□ -0.45
TTC39C-203ENST00000540918 IDI1Q13907 227 aa12.26□□□□□ -0.45
TTC39C-203ENST00000540918 NUP153P49790 1475 aaKnown RBP12.26□□□□□ -0.45
TTC39C-203ENST00000540918 ADGRF5Q8IZF2 1346 aa12.26□□□□□ -0.45
TTC39C-203ENST00000540918 XPCQ01831 940 aaPredicted RBP12.26□□□□□ -0.45
TTC39C-203ENST00000540918 ZNF428Q96B54 188 aa12.26□□□□□ -0.45
TTC39C-203ENST00000540918 ANKRD30BQ9BXX2 1392 aa12.26□□□□□ -0.45
TTC39C-203ENST00000540918 RBM19Q9Y4C8 960 aaKnown RBP12.26□□□□□ -0.45
TTC39C-203ENST00000540918 PTPN23Q9H3S7 1636 aa12.25□□□□□ -0.45
TTC39C-203ENST00000540918 GPATCH8Q9UKJ3 1502 aaKnown RBP12.25□□□□□ -0.45
TTC39C-203ENST00000540918 OS9Q13438 667 aaPredicted RBP12.25□□□□□ -0.45
TTC39C-203ENST00000540918 COG6Q9Y2V7 657 aa12.24□□□□□ -0.45
TTC39C-203ENST00000540918 PSME1Q06323 249 aa12.24□□□□□ -0.45
TTC39C-203ENST00000540918 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
TTC39C-203ENST00000540918 FBLN1P23142 703 aa12.23□□□□□ -0.45
TTC39C-203ENST00000540918 NGEFQ8N5V2 710 aa12.23□□□□□ -0.45
TTC39C-203ENST00000540918 NLRP6P59044 892 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 ADGRL1O94910 1474 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 RIPK4P57078 832 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 USP35Q9P2H5 1018 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 CNTLNQ9NXG0 1405 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 CCDC141Q6ZP82 1450 aa12.22□□□□□ -0.45
TTC39C-203ENST00000540918 CRBNQ96SW2 442 aa12.21□□□□□ -0.45
TTC39C-203ENST00000540918 CDK19Q9BWU1 502 aa12.21□□□□□ -0.45
TTC39C-203ENST00000540918 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.45
TTC39C-203ENST00000540918 PPP2R1AP30153 589 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms