RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
PHC1-209ENST00000540809 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
PHC1-209ENST00000540809 ABCC2Q92887 1545 aa13.01□□□□□ -0.33
PHC1-209ENST00000540809 RAPGEF2Q9Y4G8 1499 aa13□□□□□ -0.33
PHC1-209ENST00000540809 ASXL2Q76L83 1435 aa13□□□□□ -0.33
PHC1-209ENST00000540809 UACAQ9BZF9 1416 aa12.99□□□□□ -0.33
PHC1-209ENST00000540809 ECM2O94769 699 aaPredicted RBP12.98□□□□□ -0.33
PHC1-209ENST00000540809 UHRF1BP1LA0JNW5 1464 aa12.97□□□□□ -0.33
PHC1-209ENST00000540809 RGL2O15211 777 aa12.97□□□□□ -0.33
PHC1-209ENST00000540809 EMP3P54852 163 aa12.97□□□□□ -0.33
PHC1-209ENST00000540809 KDM6BO15054 1643 aa12.97□□□□□ -0.33
PHC1-209ENST00000540809 MFRPQ9BY79 579 aa12.96□□□□□ -0.33
PHC1-209ENST00000540809 UGGT2Q9NYU1 1516 aa12.96□□□□□ -0.33
PHC1-209ENST00000540809 PLB1Q6P1J6 1458 aa12.96□□□□□ -0.34
PHC1-209ENST00000540809 TAOK2Q9UL54 1235 aa12.94□□□□□ -0.34
PHC1-209ENST00000540809 STK24Q9Y6E0 443 aa12.94□□□□□ -0.34
PHC1-209ENST00000540809 KDM5BQ9UGL1 1544 aa12.93□□□□□ -0.34
PHC1-209ENST00000540809 PPRC1Q5VV67 1664 aaKnown RBP12.93□□□□□ -0.34
PHC1-209ENST00000540809 COL17A1Q9UMD9 1497 aaPredicted RBP12.93□□□□□ -0.34
PHC1-209ENST00000540809 HOXB1P14653 301 aaPredicted RBP12.93□□□□□ -0.34
PHC1-209ENST00000540809 NLRP6P59044 892 aa12.93□□□□□ -0.34
PHC1-209ENST00000540809 HS3ST6Q96QI5 342 aa12.93□□□□□ -0.34
PHC1-209ENST00000540809 GLI2P10070 1586 aa12.93□□□□□ -0.34
PHC1-209ENST00000540809 EPRSP07814 1512 aaKnown RBP12.91□□□□□ -0.34
PHC1-209ENST00000540809 KIAA0556O60303 1618 aa12.91□□□□□ -0.34
PHC1-209ENST00000540809 FAM205CA6NFA0 338 aa12.9□□□□□ -0.34
PHC1-209ENST00000540809 STK25O00506 426 aa12.9□□□□□ -0.34
PHC1-209ENST00000540809 SPNS2Q8IVW8 549 aa12.9□□□□□ -0.34
PHC1-209ENST00000540809 KRTAP3-3Q9BYR6 98 aa12.9□□□□□ -0.34
PHC1-209ENST00000540809 KRTAP3-2Q9BYR7 98 aa12.9□□□□□ -0.34
PHC1-209ENST00000540809 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
PHC1-209ENST00000540809 DOK7Q18PE1 504 aa12.89□□□□□ -0.35
PHC1-209ENST00000540809 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
PHC1-209ENST00000540809 KCNH8Q96L42 1107 aa12.87□□□□□ -0.35
PHC1-209ENST00000540809 P3H3Q8IVL6 736 aa12.86□□□□□ -0.35
PHC1-209ENST00000540809 MAP3K4Q9Y6R4 1608 aa12.86□□□□□ -0.35
PHC1-209ENST00000540809 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
PHC1-209ENST00000540809 ZNF710Q8N1W2 664 aa12.84□□□□□ -0.35
PHC1-209ENST00000540809 ABCA8O94911 1581 aa12.83□□□□□ -0.36
PHC1-209ENST00000540809 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
PHC1-209ENST00000540809 MMRN1Q13201 1228 aa12.83□□□□□ -0.36
PHC1-209ENST00000540809 WDR7Q9Y4E6 1490 aa12.83□□□□□ -0.36
PHC1-209ENST00000540809 GPR153Q6NV75 609 aa12.82□□□□□ -0.36
PHC1-209ENST00000540809 GOLGA3Q08378 1498 aa12.82□□□□□ -0.36
PHC1-209ENST00000540809 KIF3CO14782 793 aa12.81□□□□□ -0.36
PHC1-209ENST00000540809 ZSWIM6Q9HCJ5 1215 aa12.8□□□□□ -0.36
PHC1-209ENST00000540809 CD109Q6YHK3 1445 aa12.79□□□□□ -0.36
PHC1-209ENST00000540809 ADGRL1O94910 1474 aa12.78□□□□□ -0.36
PHC1-209ENST00000540809 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
PHC1-209ENST00000540809 ATP10BO94823 1461 aa12.78□□□□□ -0.36
PHC1-209ENST00000540809 RIMBP2O15034 1052 aa12.76□□□□□ -0.37
PHC1-209ENST00000540809 MAGI3Q5TCQ9 1506 aa12.76□□□□□ -0.37
PHC1-209ENST00000540809 PPP1R37O75864 691 aa12.75□□□□□ -0.37
PHC1-209ENST00000540809 RANGAP1P46060 587 aaPredicted RBP12.75□□□□□ -0.37
PHC1-209ENST00000540809 ERBB3P21860 1342 aa12.74□□□□□ -0.37
PHC1-209ENST00000540809 C2orf72A6NCS6 295 aa12.73□□□□□ -0.37
PHC1-209ENST00000540809 FAM9AQ8IZU1 332 aaPredicted RBP12.73□□□□□ -0.37
PHC1-209ENST00000540809 CFAP43Q8NDM7 1665 aa12.73□□□□□ -0.37
PHC1-209ENST00000540809 ARSIQ5FYB1 569 aa12.7□□□□□ -0.38
PHC1-209ENST00000540809 VARS2Q5ST30 1063 aaKnown RBP12.7□□□□□ -0.38
PHC1-209ENST00000540809 SAMD9Q5K651 1589 aa12.69□□□□□ -0.38
PHC1-209ENST00000540809 HS6ST3Q8IZP7 471 aa12.69□□□□□ -0.38
PHC1-209ENST00000540809 RAPGEF3O95398 923 aa12.68□□□□□ -0.38
PHC1-209ENST00000540809 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
PHC1-209ENST00000540809 ARAP3Q8WWN8 1544 aa12.67□□□□□ -0.38
PHC1-209ENST00000540809 RAPGEF6Q8TEU7 1601 aa12.66□□□□□ -0.38
PHC1-209ENST00000540809 FHOD3Q2V2M9 1422 aa12.65□□□□□ -0.38
PHC1-209ENST00000540809 ZNF687Q8N1G0 1237 aa12.65□□□□□ -0.38
PHC1-209ENST00000540809 ABCA9Q8IUA7 1624 aa12.65□□□□□ -0.38
PHC1-209ENST00000540809 NUP153P49790 1475 aaKnown RBP12.65□□□□□ -0.38
PHC1-209ENST00000540809 EEA1Q15075 1411 aa12.62□□□□□ -0.39
PHC1-209ENST00000540809 KIF21BO75037 1637 aa12.62□□□□□ -0.39
PHC1-209ENST00000540809 HECW2Q9P2P5 1572 aa12.62□□□□□ -0.39
PHC1-209ENST00000540809 SLC34A2O95436 690 aa12.62□□□□□ -0.39
PHC1-209ENST00000540809 PLEKHD1A6NEE1 506 aa12.61□□□□□ -0.39
PHC1-209ENST00000540809 PHLDB1Q86UU1 1377 aa12.6□□□□□ -0.39
PHC1-209ENST00000540809 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
PHC1-209ENST00000540809 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
PHC1-209ENST00000540809 NEO1Q92859 1461 aa12.58□□□□□ -0.4
PHC1-209ENST00000540809 TMC2Q8TDI7 906 aa12.56□□□□□ -0.4
PHC1-209ENST00000540809 PCDHGA4Q9Y5G9 962 aa12.56□□□□□ -0.4
PHC1-209ENST00000540809 FRMPD1Q5SYB0 1578 aa12.56□□□□□ -0.4
PHC1-209ENST00000540809 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
PHC1-209ENST00000540809 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
PHC1-209ENST00000540809 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.54□□□□□ -0.4
PHC1-209ENST00000540809 NUDT7P0C024 238 aa12.54□□□□□ -0.4
PHC1-209ENST00000540809 ARID4BQ4LE39 1312 aaPredicted RBP12.54□□□□□ -0.4
PHC1-209ENST00000540809 ADAMTSL3P82987 1691 aa12.54□□□□□ -0.4
PHC1-209ENST00000540809 AKNAQ7Z591 1439 aa12.54□□□□□ -0.4
PHC1-209ENST00000540809 PTPRMP28827 1452 aa12.53□□□□□ -0.4
PHC1-209ENST00000540809 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
PHC1-209ENST00000540809 CDK13Q14004 1512 aaKnown RBP12.52□□□□□ -0.4
PHC1-209ENST00000540809 EFCAB5A4FU69 1503 aa12.52□□□□□ -0.41
PHC1-209ENST00000540809 FANCAO15360 1455 aa12.51□□□□□ -0.41
PHC1-209ENST00000540809 DENND4BO75064 1496 aaPredicted RBP12.51□□□□□ -0.41
PHC1-209ENST00000540809 FOXK1P85037 733 aa12.5□□□□□ -0.41
PHC1-209ENST00000540809 POTEEQ6S8J3 1075 aa12.5□□□□□ -0.41
PHC1-209ENST00000540809 LHX6Q9UPM6 363 aa12.5□□□□□ -0.41
PHC1-209ENST00000540809 TTC37Q6PGP7 1564 aa12.5□□□□□ -0.41
PHC1-209ENST00000540809 BCORL1Q5H9F3 1711 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms