RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 OSBPP22059 807 aa9.56□□□□□ -0.88
SMG1P4-205ENST00000540706 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
SMG1P4-205ENST00000540706 SKIV2LQ15477 1246 aaKnown RBP9.55□□□□□ -0.88
SMG1P4-205ENST00000540706 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
SMG1P4-205ENST00000540706 CCDC61Q9Y6R9 512 aa9.54□□□□□ -0.88
SMG1P4-205ENST00000540706 MDM2Q00987 491 aaPredicted RBP9.54□□□□□ -0.88
SMG1P4-205ENST00000540706 DDX12PQ92771 950 aa9.53□□□□□ -0.88
SMG1P4-205ENST00000540706 NOM1Q5C9Z4 860 aaKnown RBP9.52□□□□□ -0.88
SMG1P4-205ENST00000540706 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.88
SMG1P4-205ENST00000540706 C1QBPQ07021 282 aaKnown RBP9.51□□□□□ -0.89
SMG1P4-205ENST00000540706 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
SMG1P4-205ENST00000540706 BEGAINQ9BUH8 593 aa9.51□□□□□ -0.89
SMG1P4-205ENST00000540706 ABL2P42684 1182 aa9.51□□□□□ -0.89
SMG1P4-205ENST00000540706 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
SMG1P4-205ENST00000540706 TTBK1Q5TCY1 1321 aaPredicted RBP9.5□□□□□ -0.89
SMG1P4-205ENST00000540706 MAP3K13O43283 966 aa9.5□□□□□ -0.89
SMG1P4-205ENST00000540706 MYT1LQ9UL68 1186 aa9.5□□□□□ -0.89
SMG1P4-205ENST00000540706 SOX12O15370 315 aa9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 FARP1Q9Y4F1 1045 aaPredicted RBP9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 UNC13AQ9UPW8 1703 aa9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 CFAP70Q5T0N1 1121 aa9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 MYSM1Q5VVJ2 828 aa9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
SMG1P4-205ENST00000540706 SPDYE5A6NIY4 337 aa9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 BRD1O95696 1058 aa9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 RFC5P40937 340 aa9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 MYT1Q01538 1121 aa9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 SND1Q7KZF4 910 aaKnown RBP eCLIP9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 SPDYE1Q8NFV5 336 aaPredicted RBP9.48□□□□□ -0.89
SMG1P4-205ENST00000540706 CDHR5Q9HBB8 845 aa9.47□□□□□ -0.89
SMG1P4-205ENST00000540706 HIC1Q14526 733 aa9.47□□□□□ -0.89
SMG1P4-205ENST00000540706 GPHNQ9NQX3 736 aaPredicted RBP9.47□□□□□ -0.89
SMG1P4-205ENST00000540706 SSTR3P32745 418 aaPredicted RBP9.46□□□□□ -0.89
SMG1P4-205ENST00000540706 PPM1GO15355 546 aaPredicted RBP9.46□□□□□ -0.9
SMG1P4-205ENST00000540706 SMARCA5O60264 1052 aaPredicted RBP9.46□□□□□ -0.9
SMG1P4-205ENST00000540706 PTGDRQ13258 359 aa9.46□□□□□ -0.9
SMG1P4-205ENST00000540706 ZNF579Q8NAF0 562 aaKnown RBP9.46□□□□□ -0.9
SMG1P4-205ENST00000540706 LIMD1Q9UGP4 676 aa9.46□□□□□ -0.9
SMG1P4-205ENST00000540706 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
SMG1P4-205ENST00000540706 HMGB1P09429 215 aaKnown RBP9.45□□□□□ -0.9
SMG1P4-205ENST00000540706 RSPH4AQ5TD94 716 aa9.44□□□□□ -0.9
SMG1P4-205ENST00000540706 CWC22Q9HCG8 908 aaKnown RBP9.44□□□□□ -0.9
SMG1P4-205ENST00000540706 AMOTL2Q9Y2J4 779 aa9.44□□□□□ -0.9
SMG1P4-205ENST00000540706 TBC1D12O60347 775 aa9.44□□□□□ -0.9
SMG1P4-205ENST00000540706 PPP1R15AO75807 674 aaPredicted RBP9.43□□□□□ -0.9
SMG1P4-205ENST00000540706 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
SMG1P4-205ENST00000540706 MRRFQ96E11 262 aaKnown RBP9.43□□□□□ -0.9
SMG1P4-205ENST00000540706 TRPC6Q9Y210 931 aa9.43□□□□□ -0.9
SMG1P4-205ENST00000540706 TMEM88BA6NKF7 163 aa9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 UPF1Q92900 1129 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 ZCCHC6Q5VYS8 1495 aaKnown RBP9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 SCNN1AP37088 669 aa9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 KCNA1Q09470 495 aa9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 ACIN1Q9UKV3 1341 aaKnown RBP9.42□□□□□ -0.9
SMG1P4-205ENST00000540706 HDGFL1Q5TGJ6 251 aa9.41□□□□□ -0.9
SMG1P4-205ENST00000540706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.41□□□□□ -0.92e-6■■■■■ 28.7
SMG1P4-205ENST00000540706 DPY19L2Q6NUT2 758 aa9.4□□□□□ -0.9
SMG1P4-205ENST00000540706 GPR37L1O60883 481 aa9.4□□□□□ -0.91
SMG1P4-205ENST00000540706 FCHSD2O94868 740 aa9.39□□□□□ -0.91
SMG1P4-205ENST00000540706 TAGLNQ01995 201 aaKnown RBP9.39□□□□□ -0.91
SMG1P4-205ENST00000540706 CSPP1Q1MSJ5 1256 aa9.39□□□□□ -0.91
SMG1P4-205ENST00000540706 NPDC1Q9NQX5 325 aaPredicted RBP9.38□□□□□ -0.91
SMG1P4-205ENST00000540706 QPCTQ16769 361 aa9.38□□□□□ -0.91
SMG1P4-205ENST00000540706 GPCPD1Q9NPB8 672 aa9.38□□□□□ -0.91
SMG1P4-205ENST00000540706 CLK2P49760 499 aaKnown RBP9.37□□□□□ -0.91
SMG1P4-205ENST00000540706 BICRAQ9NZM4 1560 aa9.37□□□□□ -0.91
SMG1P4-205ENST00000540706 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
SMG1P4-205ENST00000540706 UCN2Q96RP3 112 aa9.37□□□□□ -0.91
SMG1P4-205ENST00000540706 CCDC125Q86Z20 511 aa9.36□□□□□ -0.91
SMG1P4-205ENST00000540706 REM2Q8IYK8 340 aaPredicted RBP9.36□□□□□ -0.91
SMG1P4-205ENST00000540706 FAM217BQ9NTX9 383 aaPredicted RBP9.35□□□□□ -0.91
SMG1P4-205ENST00000540706 RBM47A0AV96 593 aaKnown RBP9.34□□□□□ -0.91
SMG1P4-205ENST00000540706 DNAJC14Q6Y2X3 702 aaPredicted RBP9.34□□□□□ -0.91
SMG1P4-205ENST00000540706 PPP1R1BQ9UD71 204 aaPredicted RBP9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 PITPNM1O00562 1244 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 PHLDB3Q6NSJ2 640 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 KIF12Q96FN5 646 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 VRTNQ9H8Y1 702 aa9.33□□□□□ -0.92
SMG1P4-205ENST00000540706 ZNF16P17020 682 aaPredicted RBP9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 PPP1R12CQ9BZL4 782 aa9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 PALM3A6NDB9 673 aaPredicted RBP9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 LMOD1P29536 600 aaPredicted RBP9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 VAC14Q08AM6 782 aa9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 HMX1Q9NP08 348 aaPredicted RBP9.32□□□□□ -0.92
SMG1P4-205ENST00000540706 CLCN1P35523 988 aa9.31□□□□□ -0.92
SMG1P4-205ENST00000540706 PLPP6Q8IY26 295 aa9.31□□□□□ -0.92
SMG1P4-205ENST00000540706 USTQ9Y2C2 406 aa9.31□□□□□ -0.92
SMG1P4-205ENST00000540706 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
SMG1P4-205ENST00000540706 ZNF662Q6ZS27 426 aa9.3□□□□□ -0.92
SMG1P4-205ENST00000540706 TSR1Q2NL82 804 aaKnown RBP9.29□□□□□ -0.92
SMG1P4-205ENST00000540706 SIRT1Q96EB6 747 aa9.29□□□□□ -0.92
SMG1P4-205ENST00000540706 FOXK1P85037 733 aa9.28□□□□□ -0.92
SMG1P4-205ENST00000540706 TFIP11Q9UBB9 837 aaKnown RBP9.28□□□□□ -0.92
SMG1P4-205ENST00000540706 MAP3K9P80192 1104 aa9.28□□□□□ -0.92
SMG1P4-205ENST00000540706 STK32AQ8WU08 396 aa9.28□□□□□ -0.92
SMG1P4-205ENST00000540706 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
SMG1P4-205ENST00000540706 GJD4Q96KN9 370 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms