RNA–Protein interactions for RNA: ENST00000540555.1

TSG101-205, Transcript of tumor susceptibility 101, humanhuman

TSL 2

Gene TSG101, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSG101-205ENST00000540555 DIP2BQ9P265 1576 aa7.54□□□□□ -1.2
TSG101-205ENST00000540555 TMEM92Q6UXU6 159 aa7.54□□□□□ -1.2
TSG101-205ENST00000540555 PDE4AP27815 886 aa7.53□□□□□ -1.2
TSG101-205ENST00000540555 NUP160Q12769 1436 aa7.52□□□□□ -1.2
TSG101-205ENST00000540555 CEP170Q5SW79 1584 aa7.52□□□□□ -1.21
TSG101-205ENST00000540555 G3V3G9 751 aa7.52□□□□□ -1.21
TSG101-205ENST00000540555 KIF3CO14782 793 aa7.52□□□□□ -1.21
TSG101-205ENST00000540555 MFSD10Q14728 455 aa7.52□□□□□ -1.21
TSG101-205ENST00000540555 LARP6Q9BRS8 491 aaKnown RBP7.52□□□□□ -1.21
TSG101-205ENST00000540555 GPHNQ9NQX3 736 aaPredicted RBP7.52□□□□□ -1.21
TSG101-205ENST00000540555 CCDC88BA6NC98 1476 aa7.5□□□□□ -1.21
TSG101-205ENST00000540555 SHROOM2Q13796 1616 aa7.5□□□□□ -1.21
TSG101-205ENST00000540555 C2orf72A6NCS6 295 aa7.49□□□□□ -1.21
TSG101-205ENST00000540555 DSG2Q14126 1118 aa7.48□□□□□ -1.21
TSG101-205ENST00000540555 WDR70Q9NW82 654 aa7.48□□□□□ -1.21
TSG101-205ENST00000540555 GRIN2AQ12879 1464 aa7.48□□□□□ -1.21
TSG101-205ENST00000540555 DISP3Q9P2K9 1392 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 EMP3P54852 163 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 FOXK1P85037 733 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 C3orf67Q6ZVT6 689 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 TMC2Q8TDI7 906 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 DDX27Q96GQ7 796 aaKnown RBP7.47□□□□□ -1.21
TSG101-205ENST00000540555 FGD5Q6ZNL6 1462 aa7.47□□□□□ -1.21
TSG101-205ENST00000540555 KRTAP3-3Q9BYR6 98 aa7.46□□□□□ -1.22
TSG101-205ENST00000540555 KRTAP3-2Q9BYR7 98 aa7.46□□□□□ -1.22
TSG101-205ENST00000540555 PPP1R15BQ5SWA1 713 aa7.45□□□□□ -1.22
TSG101-205ENST00000540555 COL17A1Q9UMD9 1497 aaPredicted RBP7.44□□□□□ -1.22
TSG101-205ENST00000540555 CAMK2BQ13554 666 aa7.44□□□□□ -1.22
TSG101-205ENST00000540555 E2F4Q16254 413 aa7.44□□□□□ -1.22
TSG101-205ENST00000540555 KCNV2Q8TDN2 545 aa7.44□□□□□ -1.22
TSG101-205ENST00000540555 PRG4Q92954 1404 aaPredicted RBP7.44□□□□□ -1.22
TSG101-205ENST00000540555 POTEB3A0JP26 581 aa7.43□□□□□ -1.22
TSG101-205ENST00000540555 POTEBQ6S5H4 581 aa7.43□□□□□ -1.22
TSG101-205ENST00000540555 PLPP6Q8IY26 295 aa7.43□□□□□ -1.22
TSG101-205ENST00000540555 HS3ST6Q96QI5 342 aa7.43□□□□□ -1.22
TSG101-205ENST00000540555 FAM205CA6NFA0 338 aa7.41□□□□□ -1.22
TSG101-205ENST00000540555 ABCA10Q8WWZ4 1543 aa7.41□□□□□ -1.22
TSG101-205ENST00000540555 TOP2BQ02880 1626 aa7.41□□□□□ -1.22
TSG101-205ENST00000540555 P3H3Q8IVL6 736 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 JPH4Q96JJ6 628 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 EMILIN3Q9NT22 766 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 ARIH1Q9Y4X5 557 aaPredicted RBP7.4□□□□□ -1.22
TSG101-205ENST00000540555 GLI2P10070 1586 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 ABCA5Q8WWZ7 1642 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 ADCY10Q96PN6 1610 aa7.4□□□□□ -1.22
TSG101-205ENST00000540555 CUX1P39880 1505 aa7.38□□□□□ -1.23
TSG101-205ENST00000540555 FHAD1B1AJZ9 1412 aa7.38□□□□□ -1.23
TSG101-205ENST00000540555 CERKQ8TCT0 537 aa7.38□□□□□ -1.23
TSG101-205ENST00000540555 ARHGEF1Q92888 912 aaKnown RBP7.38□□□□□ -1.23
TSG101-205ENST00000540555 ADAMTS12P58397 1594 aa7.37□□□□□ -1.23
TSG101-205ENST00000540555 PBRM1Q86U86 1689 aa7.37□□□□□ -1.23
TSG101-205ENST00000540555 PPRC1Q5VV67 1664 aaKnown RBP7.36□□□□□ -1.23
TSG101-205ENST00000540555 HOXB3P14651 431 aaPredicted RBP7.36□□□□□ -1.23
TSG101-205ENST00000540555 SPATA31D1Q6ZQQ2 1576 aa7.35□□□□□ -1.23
TSG101-205ENST00000540555 HOXB1P14653 301 aaPredicted RBP7.35□□□□□ -1.23
TSG101-205ENST00000540555 OXER1Q8TDS5 423 aa7.35□□□□□ -1.23
TSG101-205ENST00000540555 BCANQ96GW7 911 aa7.35□□□□□ -1.23
TSG101-205ENST00000540555 PLB1Q6P1J6 1458 aa7.35□□□□□ -1.23
TSG101-205ENST00000540555 SLC34A2O95436 690 aa7.34□□□□□ -1.23
TSG101-205ENST00000540555 DPYSL4O14531 572 aa7.33□□□□□ -1.24
TSG101-205ENST00000540555 PTCD2Q8WV60 388 aaKnown RBP7.33□□□□□ -1.24
TSG101-205ENST00000540555 PCF11O94913 1555 aaKnown RBP7.33□□□□□ -1.24
TSG101-205ENST00000540555 PTPRMP28827 1452 aa7.32□□□□□ -1.24
TSG101-205ENST00000540555 TEX14Q8IWB6 1497 aa7.32□□□□□ -1.24
TSG101-205ENST00000540555 UPF1Q92900 1129 aaKnown RBP eCLIP7.32□□□□□ -1.24
TSG101-205ENST00000540555 ASXL2Q76L83 1435 aa7.32□□□□□ -1.24
TSG101-205ENST00000540555 TSPOAP1O95153 1857 aa7.31□□□□□ -1.24
TSG101-205ENST00000540555 DOK7Q18PE1 504 aa7.31□□□□□ -1.24
TSG101-205ENST00000540555 ABCC2Q92887 1545 aa7.31□□□□□ -1.24
TSG101-205ENST00000540555 NBR1Q14596 966 aa7.3□□□□□ -1.24
TSG101-205ENST00000540555 EPRSP07814 1512 aaKnown RBP7.29□□□□□ -1.24
TSG101-205ENST00000540555 SEMA3EO15041 775 aa7.29□□□□□ -1.24
TSG101-205ENST00000540555 MAP3K9P80192 1104 aa7.29□□□□□ -1.24
TSG101-205ENST00000540555 ZSWIM6Q9HCJ5 1215 aa7.29□□□□□ -1.24
TSG101-205ENST00000540555 ERICH3Q5RHP9 1530 aa7.28□□□□□ -1.24
TSG101-205ENST00000540555 RUSC2Q8N2Y8 1516 aa7.28□□□□□ -1.24
TSG101-205ENST00000540555 PDIA6Q15084 440 aa7.28□□□□□ -1.24
TSG101-205ENST00000540555 ZNF710Q8N1W2 664 aa7.28□□□□□ -1.24
TSG101-205ENST00000540555 RNF166Q96A37 237 aaPredicted RBP7.28□□□□□ -1.24
TSG101-205ENST00000540555 PCDHGA4Q9Y5G9 962 aa7.28□□□□□ -1.24
TSG101-205ENST00000540555 KIAA0586Q9BVV6 1533 aa7.27□□□□□ -1.25
TSG101-205ENST00000540555 MAP3K4Q9Y6R4 1608 aa7.27□□□□□ -1.25
TSG101-205ENST00000540555 TESPA1A2RU30 521 aaPredicted RBP7.27□□□□□ -1.25
TSG101-205ENST00000540555 SPDYE16A6NNV3 312 aaPredicted RBP7.27□□□□□ -1.25
TSG101-205ENST00000540555 RIMBP2O15034 1052 aa7.27□□□□□ -1.25
TSG101-205ENST00000540555 GPR153Q6NV75 609 aa7.27□□□□□ -1.25
TSG101-205ENST00000540555 UHRF1BP1LA0JNW5 1464 aa7.27□□□□□ -1.25
TSG101-205ENST00000540555 ANO8Q9HCE9 1232 aaPredicted RBP7.26□□□□□ -1.25
TSG101-205ENST00000540555 PTPRGP23470 1445 aa7.26□□□□□ -1.25
TSG101-205ENST00000540555 ERBB3P21860 1342 aa7.26□□□□□ -1.25
TSG101-205ENST00000540555 ADAMTSL3P82987 1691 aa7.25□□□□□ -1.25
TSG101-205ENST00000540555 TBC1D12O60347 775 aa7.25□□□□□ -1.25
TSG101-205ENST00000540555 EVI5O60447 810 aa7.25□□□□□ -1.25
TSG101-205ENST00000540555 ARSIQ5FYB1 569 aa7.25□□□□□ -1.25
TSG101-205ENST00000540555 KHSRPQ92945 711 aaKnown RBP eCLIP7.25□□□□□ -1.25
TSG101-205ENST00000540555 WRNQ14191 1432 aaPredicted RBP eCLIP7.25□□□□□ -1.25
TSG101-205ENST00000540555 MAGI3Q5TCQ9 1506 aa7.24□□□□□ -1.25
TSG101-205ENST00000540555 MLLT3P42568 568 aaPredicted RBP7.24□□□□□ -1.25
TSG101-205ENST00000540555 PTGER2P43116 358 aa7.24□□□□□ -1.25
TSG101-205ENST00000540555 ZNF687Q8N1G0 1237 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms