RNA–Protein interactions for RNA: ENST00000540527.5

LRP6-205, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-205ENST00000540527 ANKRD13AQ8IZ07 590 aa14.33□□□□□ -0.12
LRP6-205ENST00000540527 EFCAB3Q8N7B9 438 aa14.33□□□□□ -0.12
LRP6-205ENST00000540527 SREK1Q8WXA9 508 aaKnown RBP14.33□□□□□ -0.12
LRP6-205ENST00000540527 C8orf37Q96NL8 207 aa14.33□□□□□ -0.12
LRP6-205ENST00000540527 REPIN1Q9BWE0 567 aaKnown RBP14.32□□□□□ -0.12
LRP6-205ENST00000540527 GNEQ9Y223 722 aaKnown RBP14.31□□□□□ -0.12
LRP6-205ENST00000540527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.3□□□□□ -0.12
LRP6-205ENST00000540527 TXNDC2Q86VQ3 553 aa14.3□□□□□ -0.12
LRP6-205ENST00000540527 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
LRP6-205ENST00000540527 PCDHB8Q9UN66 801 aa14.3□□□□□ -0.12
LRP6-205ENST00000540527 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
LRP6-205ENST00000540527 ERCC3P19447 782 aa14.29□□□□□ -0.12
LRP6-205ENST00000540527 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
LRP6-205ENST00000540527 VRTNQ9H8Y1 702 aa14.29□□□□□ -0.12
LRP6-205ENST00000540527 ARID4BQ4LE39 1312 aaPredicted RBP14.29□□□□□ -0.12
LRP6-205ENST00000540527 FECHP22830 423 aa14.28□□□□□ -0.12
LRP6-205ENST00000540527 GDPD2Q9HCC8 539 aa14.28□□□□□ -0.12
LRP6-205ENST00000540527 ATP1B4Q9UN42 357 aaPredicted RBP14.28□□□□□ -0.12
LRP6-205ENST00000540527 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
LRP6-205ENST00000540527 POM121CA8CG34 1229 aa14.27□□□□□ -0.13
LRP6-205ENST00000540527 FCHSD2O94868 740 aa14.27□□□□□ -0.13
LRP6-205ENST00000540527 TCF3P15923 654 aa14.27□□□□□ -0.13
LRP6-205ENST00000540527 CERS3Q8IU89 383 aa14.26□□□□□ -0.13
LRP6-205ENST00000540527 CARNS1A5YM72 827 aa14.25□□□□□ -0.13
LRP6-205ENST00000540527 TSR1Q2NL82 804 aaKnown RBP14.25□□□□□ -0.13
LRP6-205ENST00000540527 PPP1R15BQ5SWA1 713 aa14.25□□□□□ -0.13
LRP6-205ENST00000540527 TMUB1Q9BVT8 246 aa14.25□□□□□ -0.13
LRP6-205ENST00000540527 RFC5P40937 340 aa14.22□□□□□ -0.13
LRP6-205ENST00000540527 CFAP70Q5T0N1 1121 aa14.22□□□□□ -0.13
LRP6-205ENST00000540527 EMILIN3Q9NT22 766 aa14.22□□□□□ -0.13
LRP6-205ENST00000540527 CLCN1P35523 988 aa14.21□□□□□ -0.13
LRP6-205ENST00000540527 TMEM259Q4ZIN3 620 aa14.21□□□□□ -0.13
LRP6-205ENST00000540527 CC2D2BQ6DHV5 1058 aa14.21□□□□□ -0.13
LRP6-205ENST00000540527 ZNF579Q8NAF0 562 aaKnown RBP14.21□□□□□ -0.13
LRP6-205ENST00000540527 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
LRP6-205ENST00000540527 RFX1P22670 979 aa14.2□□□□□ -0.14
LRP6-205ENST00000540527 SOCS7O14512 581 aa14.19□□□□□ -0.14
LRP6-205ENST00000540527 MTMR14Q8NCE2 650 aa14.19□□□□□ -0.14
LRP6-205ENST00000540527 UBXN4Q92575 508 aa14.19□□□□□ -0.14
LRP6-205ENST00000540527 ABL2P42684 1182 aa14.18□□□□□ -0.14
LRP6-205ENST00000540527 SIRT1Q96EB6 747 aa14.18□□□□□ -0.14
LRP6-205ENST00000540527 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
LRP6-205ENST00000540527 TMEM88BA6NKF7 163 aa14.17□□□□□ -0.14
LRP6-205ENST00000540527 ZNF16P17020 682 aaPredicted RBP14.17□□□□□ -0.14
LRP6-205ENST00000540527 PSMD1Q99460 953 aa14.17□□□□□ -0.14
LRP6-205ENST00000540527 PRM3Q9NNZ6 103 aa14.17□□□□□ -0.14
LRP6-205ENST00000540527 DNAJC14Q6Y2X3 702 aaPredicted RBP14.16□□□□□ -0.14
LRP6-205ENST00000540527 GPCPD1Q9NPB8 672 aa14.16□□□□□ -0.14
LRP6-205ENST00000540527 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.14
LRP6-205ENST00000540527 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
LRP6-205ENST00000540527 TAF7LQ5H9L4 462 aa14.14□□□□□ -0.15
LRP6-205ENST00000540527 MS4A4AQ96JQ5 239 aa14.14□□□□□ -0.15
LRP6-205ENST00000540527 BEGAINQ9BUH8 593 aa14.14□□□□□ -0.15
LRP6-205ENST00000540527 GRXCR2A6NFK2 248 aa14.13□□□□□ -0.15
LRP6-205ENST00000540527 SSTR3P32745 418 aaPredicted RBP14.13□□□□□ -0.15
LRP6-205ENST00000540527 ZNF592Q92610 1267 aa14.13□□□□□ -0.15
LRP6-205ENST00000540527 ANKRD62A6NC57 917 aa14.12□□□□□ -0.15
LRP6-205ENST00000540527 CLK2P49760 499 aaKnown RBP14.12□□□□□ -0.15
LRP6-205ENST00000540527 ZC3H6P61129 1189 aaKnown RBP14.12□□□□□ -0.15
LRP6-205ENST00000540527 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
LRP6-205ENST00000540527 SPDYE1Q8NFV5 336 aaPredicted RBP14.12□□□□□ -0.15
LRP6-205ENST00000540527 BCCIPQ9P287 314 aaKnown RBP eCLIP14.11□□□□□ -0.15
LRP6-205ENST00000540527 HDGFL1Q5TGJ6 251 aa14.1□□□□□ -0.15
LRP6-205ENST00000540527 HIRIP3Q9BW71 556 aaPredicted RBP14.1□□□□□ -0.15
LRP6-205ENST00000540527 GPHNQ9NQX3 736 aaPredicted RBP14.1□□□□□ -0.15
LRP6-205ENST00000540527 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
LRP6-205ENST00000540527 OSBPP22059 807 aa14.09□□□□□ -0.15
LRP6-205ENST00000540527 SF3A1Q15459 793 aaKnown RBP14.09□□□□□ -0.15
LRP6-205ENST00000540527 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
LRP6-205ENST00000540527 KDM4AO75164 1064 aa14.08□□□□□ -0.16
LRP6-205ENST00000540527 ATG7O95352 703 aa14.08□□□□□ -0.16
LRP6-205ENST00000540527 BCL2L13Q9BXK5 485 aa14.08□□□□□ -0.16
LRP6-205ENST00000540527 PPP1R12CQ9BZL4 782 aa14.08□□□□□ -0.16
LRP6-205ENST00000540527 CCER1Q8TC90 406 aaPredicted RBP14.07□□□□□ -0.16
LRP6-205ENST00000540527 ADAMTS19Q8TE59 1207 aa14.07□□□□□ -0.16
LRP6-205ENST00000540527 DSG3P32926 999 aa14.06□□□□□ -0.16
LRP6-205ENST00000540527 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
LRP6-205ENST00000540527 TBC1D2BQ9UPU7 963 aa14.06□□□□□ -0.16
LRP6-205ENST00000540527 VAMP1P23763 118 aa14.05□□□□□ -0.16
LRP6-205ENST00000540527 MDM2Q00987 491 aaPredicted RBP14.05□□□□□ -0.16
LRP6-205ENST00000540527 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
LRP6-205ENST00000540527 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.04□□□□□ -0.16
LRP6-205ENST00000540527 PTGDRQ13258 359 aa14.03□□□□□ -0.16
LRP6-205ENST00000540527 NOL8Q76FK4 1167 aaKnown RBP14.02□□□□□ -0.17
LRP6-205ENST00000540527 CLSTN1O94985 981 aa14.01□□□□□ -0.17
LRP6-205ENST00000540527 FBXO31Q5XUX0 539 aaPredicted RBP14.01□□□□□ -0.17
LRP6-205ENST00000540527 C1QBPQ07021 282 aaKnown RBP14□□□□□ -0.17
LRP6-205ENST00000540527 GIPC2Q8TF65 315 aa14□□□□□ -0.17
LRP6-205ENST00000540527 TSPYL2Q9H2G4 693 aaPredicted RBP14□□□□□ -0.17
LRP6-205ENST00000540527 BRPF3Q9ULD4 1205 aa14□□□□□ -0.17
LRP6-205ENST00000540527 FAM217BQ9NTX9 383 aaPredicted RBP13.99□□□□□ -0.17
LRP6-205ENST00000540527 PPP1R1BQ9UD71 204 aaPredicted RBP13.99□□□□□ -0.17
LRP6-205ENST00000540527 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
LRP6-205ENST00000540527 NAALADL2Q58DX5 795 aa13.98□□□□□ -0.17
LRP6-205ENST00000540527 NOM1Q5C9Z4 860 aaKnown RBP13.98□□□□□ -0.17
LRP6-205ENST00000540527 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
LRP6-205ENST00000540527 MARCH6O60337 910 aa13.95□□□□□ -0.18
LRP6-205ENST00000540527 WASHC4Q2M389 1173 aa13.95□□□□□ -0.18
LRP6-205ENST00000540527 GIMAP6Q6P9H5 292 aa13.95□□□□□ -0.18
LRP6-205ENST00000540527 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms