RNA–Protein interactions for RNA: ENST00000540452.1

C2CD3-215, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 430 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-215ENST00000540452 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
C2CD3-215ENST00000540452 VWDEQ8N2E2 1590 aa11.88□□□□□ -0.51
C2CD3-215ENST00000540452 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
C2CD3-215ENST00000540452 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
C2CD3-215ENST00000540452 POGZQ7Z3K3 1410 aa11.87□□□□□ -0.51
C2CD3-215ENST00000540452 SCAPERQ9BY12 1400 aa11.87□□□□□ -0.51
C2CD3-215ENST00000540452 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
C2CD3-215ENST00000540452 HECW2Q9P2P5 1572 aa11.87□□□□□ -0.51
C2CD3-215ENST00000540452 KIDINS220Q9ULH0 1771 aa11.87□□□□□ -0.51
C2CD3-215ENST00000540452 RNF17Q9BXT8 1623 aaKnown RBP11.86□□□□□ -0.51
C2CD3-215ENST00000540452 TET3O43151 1660 aa11.86□□□□□ -0.51
C2CD3-215ENST00000540452 DHX29Q7Z478 1369 aaKnown RBP11.85□□□□□ -0.51
C2CD3-215ENST00000540452 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
C2CD3-215ENST00000540452 ADRA2BP18089 450 aa11.84□□□□□ -0.51
C2CD3-215ENST00000540452 PKD2Q13563 968 aa11.84□□□□□ -0.51
C2CD3-215ENST00000540452 PPP6R1Q9UPN7 881 aa11.84□□□□□ -0.51
C2CD3-215ENST00000540452 LMTK2Q8IWU2 1503 aa11.84□□□□□ -0.51
C2CD3-215ENST00000540452 DIP2BQ9P265 1576 aa11.84□□□□□ -0.51
C2CD3-215ENST00000540452 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
C2CD3-215ENST00000540452 RICTORQ6R327 1708 aa11.83□□□□□ -0.52
C2CD3-215ENST00000540452 ZMYM4Q5VZL5 1548 aa11.82□□□□□ -0.52
C2CD3-215ENST00000540452 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
C2CD3-215ENST00000540452 KANK1Q14678 1352 aa11.81□□□□□ -0.52
C2CD3-215ENST00000540452 CCDC144AA2RUR9 1427 aa11.8□□□□□ -0.52
C2CD3-215ENST00000540452 TRPM2O94759 1503 aa11.8□□□□□ -0.52
C2CD3-215ENST00000540452 SPHKAPQ2M3C7 1700 aa11.8□□□□□ -0.52
C2CD3-215ENST00000540452 MROH1Q8NDA8 1641 aa11.79□□□□□ -0.52
C2CD3-215ENST00000540452 PTPRTO14522 1441 aa11.79□□□□□ -0.52
C2CD3-215ENST00000540452 A2MP01023 1474 aa11.79□□□□□ -0.52
C2CD3-215ENST00000540452 L3MBTL2Q969R5 705 aa11.79□□□□□ -0.52
C2CD3-215ENST00000540452 REREQ9P2R6 1566 aa11.79□□□□□ -0.52
C2CD3-215ENST00000540452 LAMC1P11047 1609 aa11.78□□□□□ -0.52
C2CD3-215ENST00000540452 E9PCH4 1651 aa11.78□□□□□ -0.52
C2CD3-215ENST00000540452 ZC3H13Q5T200 1668 aaKnown RBP11.78□□□□□ -0.52
C2CD3-215ENST00000540452 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
C2CD3-215ENST00000540452 AFAP1Q8N556 730 aa11.78□□□□□ -0.52
C2CD3-215ENST00000540452 CEP152O94986 1710 aa11.77□□□□□ -0.52
C2CD3-215ENST00000540452 EFCAB6Q5THR3 1501 aa11.77□□□□□ -0.52
C2CD3-215ENST00000540452 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
C2CD3-215ENST00000540452 FRMPD1Q5SYB0 1578 aa11.75□□□□□ -0.53
C2CD3-215ENST00000540452 ABCA6Q8N139 1617 aa11.75□□□□□ -0.53
C2CD3-215ENST00000540452 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
C2CD3-215ENST00000540452 DIP2CQ9Y2E4 1556 aa11.75□□□□□ -0.53
C2CD3-215ENST00000540452 PPRC1Q5VV67 1664 aaKnown RBP11.75□□□□□ -0.53
C2CD3-215ENST00000540452 ARID4BQ4LE39 1312 aaPredicted RBP11.74□□□□□ -0.53
C2CD3-215ENST00000540452 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
C2CD3-215ENST00000540452 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
C2CD3-215ENST00000540452 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
C2CD3-215ENST00000540452 TRPM1Q7Z4N2 1603 aa11.71□□□□□ -0.53
C2CD3-215ENST00000540452 KIAA1210Q9ULL0 1709 aa11.71□□□□□ -0.54
C2CD3-215ENST00000540452 AGLP35573 1532 aa11.7□□□□□ -0.54
C2CD3-215ENST00000540452 ARHGAP31Q2M1Z3 1444 aa11.7□□□□□ -0.54
C2CD3-215ENST00000540452 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
C2CD3-215ENST00000540452 KDM4FA0A1W2PPD8 638 aa11.7□□□□□ -0.54
C2CD3-215ENST00000540452 KIF1BO60333 1816 aa11.7□□□□□ -0.54
C2CD3-215ENST00000540452 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
C2CD3-215ENST00000540452 CNTLNQ9NXG0 1405 aa11.69□□□□□ -0.54
C2CD3-215ENST00000540452 CLTCL1P53675 1640 aa11.68□□□□□ -0.54
C2CD3-215ENST00000540452 PIAS4Q8N2W9 510 aaPredicted RBP11.68□□□□□ -0.54
C2CD3-215ENST00000540452 ABCC3O15438 1527 aa11.67□□□□□ -0.54
C2CD3-215ENST00000540452 KIF3BO15066 747 aa11.67□□□□□ -0.54
C2CD3-215ENST00000540452 NBPF8Q3BBV2 869 aa11.67□□□□□ -0.54
C2CD3-215ENST00000540452 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
C2CD3-215ENST00000540452 MYOM2P54296 1465 aa11.66□□□□□ -0.54
C2CD3-215ENST00000540452 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.66□□□□□ -0.54
C2CD3-215ENST00000540452 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
C2CD3-215ENST00000540452 HSPA5P11021 654 aaKnown RBP11.65□□□□□ -0.54
C2CD3-215ENST00000540452 FAM69CQ0P6D2 419 aa11.65□□□□□ -0.54
C2CD3-215ENST00000540452 ROCK2O75116 1388 aaKnown RBP11.65□□□□□ -0.55
C2CD3-215ENST00000540452 PIK3C2BO00750 1634 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 MIER1Q8N108 512 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 MYT1LQ9UL68 1186 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 ARHGEF40Q8TER5 1519 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 USP47Q96K76 1375 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
C2CD3-215ENST00000540452 CENPBP07199 599 aaPredicted RBP11.63□□□□□ -0.55
C2CD3-215ENST00000540452 ADGRB3O60242 1522 aa11.63□□□□□ -0.55
C2CD3-215ENST00000540452 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
C2CD3-215ENST00000540452 NOS1P29475 1434 aa11.62□□□□□ -0.55
C2CD3-215ENST00000540452 TSPOAP1O95153 1857 aa11.62□□□□□ -0.55
C2CD3-215ENST00000540452 CCER2I3L3R5 266 aa11.62□□□□□ -0.55
C2CD3-215ENST00000540452 SLC24A1O60721 1099 aa11.62□□□□□ -0.55
C2CD3-215ENST00000540452 CCDC7Q96M83 1385 aa11.62□□□□□ -0.55
C2CD3-215ENST00000540452 NPATQ14207 1427 aa11.61□□□□□ -0.55
C2CD3-215ENST00000540452 DCAF11Q8TEB1 546 aa11.61□□□□□ -0.55
C2CD3-215ENST00000540452 NRXN1Q9ULB1 1477 aa11.61□□□□□ -0.55
C2CD3-215ENST00000540452 IQGAP1P46940 1657 aa11.6□□□□□ -0.55
C2CD3-215ENST00000540452 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
C2CD3-215ENST00000540452 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
C2CD3-215ENST00000540452 YEATS2Q9ULM3 1422 aa11.59□□□□□ -0.55
C2CD3-215ENST00000540452 SETBP1Q9Y6X0 1596 aa11.58□□□□□ -0.55
C2CD3-215ENST00000540452 RAPGEF3O95398 923 aa11.58□□□□□ -0.56
C2CD3-215ENST00000540452 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
C2CD3-215ENST00000540452 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
C2CD3-215ENST00000540452 PPLO60437 1756 aa11.58□□□□□ -0.56
C2CD3-215ENST00000540452 PREX1Q8TCU6 1659 aa11.57□□□□□ -0.56
C2CD3-215ENST00000540452 ANP32CO43423 234 aa11.57□□□□□ -0.56
C2CD3-215ENST00000540452 WASHC2CQ9Y4E1 1318 aa11.57□□□□□ -0.56
C2CD3-215ENST00000540452 SIGLEC1Q9BZZ2 1709 aa11.56□□□□□ -0.56
C2CD3-215ENST00000540452 MROH2AA6NES4 1674 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms