RNA–Protein interactions for RNA: ENST00000540256.1

PPFIBP1-211, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 424 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-211ENST00000540256 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
PPFIBP1-211ENST00000540256 ZBTB47Q9UFB7 747 aaPredicted RBP9.59□□□□□ -0.87
PPFIBP1-211ENST00000540256 NUDCQ9Y266 331 aa9.59□□□□□ -0.87
PPFIBP1-211ENST00000540256 INSRP06213 1382 aa9.59□□□□□ -0.87
PPFIBP1-211ENST00000540256 SHROOM2Q13796 1616 aa9.59□□□□□ -0.87
PPFIBP1-211ENST00000540256 CLASP1Q7Z460 1538 aa9.58□□□□□ -0.88
PPFIBP1-211ENST00000540256 DEKP35659 375 aaKnown RBP9.58□□□□□ -0.88
PPFIBP1-211ENST00000540256 IPO9Q96P70 1041 aaKnown RBP9.58□□□□□ -0.88
PPFIBP1-211ENST00000540256 KIF7Q2M1P5 1343 aa9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 EPRSP07814 1512 aaKnown RBP9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 C11orf95C9JLR9 678 aaPredicted RBP9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 CD44P16070 742 aaKnown RBP9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 DHX29Q7Z478 1369 aaKnown RBP9.57□□□□□ -0.88
PPFIBP1-211ENST00000540256 MAGI3Q5TCQ9 1506 aa9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 MBD5Q9P267 1494 aa9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 CCDC184Q52MB2 194 aa9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 IFNLR1Q8IU57 520 aaPredicted RBP9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 UHRF1BP1Q6BDS2 1440 aa9.56□□□□□ -0.88
PPFIBP1-211ENST00000540256 MS4A1P11836 297 aa9.55□□□□□ -0.88
PPFIBP1-211ENST00000540256 ANP32AP39687 249 aaKnown RBP9.55□□□□□ -0.88
PPFIBP1-211ENST00000540256 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
PPFIBP1-211ENST00000540256 DNMT1P26358 1616 aaKnown RBP9.55□□□□□ -0.88
PPFIBP1-211ENST00000540256 ZMYM4Q5VZL5 1548 aa9.55□□□□□ -0.88
PPFIBP1-211ENST00000540256 TCERG1O14776 1098 aaKnown RBP9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 PDE3BQ13370 1112 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 NBPF8Q3BBV2 869 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 FAM9BQ8IZU0 186 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 RRP7BPQ9NSQ0 103 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 DAPK1P53355 1430 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 CARMIL2Q6F5E8 1435 aa9.54□□□□□ -0.88
PPFIBP1-211ENST00000540256 LRPPRCP42704 1394 aaKnown RBP9.53□□□□□ -0.88
PPFIBP1-211ENST00000540256 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
PPFIBP1-211ENST00000540256 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
PPFIBP1-211ENST00000540256 ABCC5O15440 1437 aa9.53□□□□□ -0.88
PPFIBP1-211ENST00000540256 KDM6BO15054 1643 aa9.53□□□□□ -0.88
PPFIBP1-211ENST00000540256 BRD4O60885 1362 aaPredicted RBP9.52□□□□□ -0.88
PPFIBP1-211ENST00000540256 ADGRL2O95490 1459 aa9.52□□□□□ -0.89
PPFIBP1-211ENST00000540256 NUBP1P53384 320 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 RALBP1Q15311 655 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 ZRANB1Q9UGI0 708 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 ARHGEF12Q9NZN5 1544 aa9.51□□□□□ -0.89
PPFIBP1-211ENST00000540256 KIAA1107Q9UPP5 1409 aa9.5□□□□□ -0.89
PPFIBP1-211ENST00000540256 PAK3O75914 559 aaPredicted RBP9.5□□□□□ -0.89
PPFIBP1-211ENST00000540256 SP7Q8TDD2 431 aaPredicted RBP9.5□□□□□ -0.89
PPFIBP1-211ENST00000540256 WASHC2CQ9Y4E1 1318 aa9.5□□□□□ -0.89
PPFIBP1-211ENST00000540256 PZPP20742 1482 aa9.49□□□□□ -0.89
PPFIBP1-211ENST00000540256 TSPYL2Q9H2G4 693 aaPredicted RBP9.49□□□□□ -0.89
PPFIBP1-211ENST00000540256 KIF15Q9NS87 1388 aa9.49□□□□□ -0.89
PPFIBP1-211ENST00000540256 RALGAPBQ86X10 1494 aa9.48□□□□□ -0.89
PPFIBP1-211ENST00000540256 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
PPFIBP1-211ENST00000540256 KIF14Q15058 1648 aa9.48□□□□□ -0.89
PPFIBP1-211ENST00000540256 KDM5CP41229 1560 aa9.47□□□□□ -0.89
PPFIBP1-211ENST00000540256 PPM1GO15355 546 aaPredicted RBP9.47□□□□□ -0.89
PPFIBP1-211ENST00000540256 CHIC2Q9UKJ5 165 aa9.47□□□□□ -0.89
PPFIBP1-211ENST00000540256 USP47Q96K76 1375 aa9.47□□□□□ -0.89
PPFIBP1-211ENST00000540256 MYBBP1AQ9BQG0 1328 aaKnown RBP9.46□□□□□ -0.9
PPFIBP1-211ENST00000540256 DISP1Q96F81 1524 aa9.46□□□□□ -0.9
PPFIBP1-211ENST00000540256 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
PPFIBP1-211ENST00000540256 SPOCK2Q92563 424 aa9.45□□□□□ -0.9
PPFIBP1-211ENST00000540256 KDM5DQ9BY66 1539 aa9.45□□□□□ -0.9
PPFIBP1-211ENST00000540256 RAPGEF6Q8TEU7 1601 aa9.45□□□□□ -0.9
PPFIBP1-211ENST00000540256 ADGBQ8N7X0 1667 aa9.45□□□□□ -0.9
PPFIBP1-211ENST00000540256 RRP1P56182 461 aaKnown RBP9.44□□□□□ -0.9
PPFIBP1-211ENST00000540256 ZNF579Q8NAF0 562 aaKnown RBP9.44□□□□□ -0.9
PPFIBP1-211ENST00000540256 BCORL1Q5H9F3 1711 aa9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 SHANK2Q9UPX8 1470 aa9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 TROQ12816 1431 aaPredicted RBP9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 PRG4Q92954 1404 aaPredicted RBP9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 JPH4Q96JJ6 628 aa9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 BACH2Q9BYV9 841 aa9.43□□□□□ -0.9
PPFIBP1-211ENST00000540256 ADCY10Q96PN6 1610 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 PLEKHH2Q8IVE3 1493 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 ANKRD30AQ9BXX3 1397 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 DCAF8Q5TAQ9 597 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 FAM212AQ96EL1 285 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 ITSN2Q9NZM3 1697 aa9.42□□□□□ -0.9
PPFIBP1-211ENST00000540256 CDK13Q14004 1512 aaKnown RBP9.41□□□□□ -0.9
PPFIBP1-211ENST00000540256 PDE4AP27815 886 aa9.41□□□□□ -0.9
PPFIBP1-211ENST00000540256 NLRP13Q86W25 1043 aa9.41□□□□□ -0.9
PPFIBP1-211ENST00000540256 PHF12Q96QT6 1004 aa9.41□□□□□ -0.9
PPFIBP1-211ENST00000540256 CCDC61Q9Y6R9 512 aa9.41□□□□□ -0.9
PPFIBP1-211ENST00000540256 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.9
PPFIBP1-211ENST00000540256 PTPRGP23470 1445 aa9.4□□□□□ -0.9
PPFIBP1-211ENST00000540256 PARD3Q8TEW0 1356 aa9.4□□□□□ -0.9
PPFIBP1-211ENST00000540256 GABBR2O75899 941 aa9.4□□□□□ -0.9
PPFIBP1-211ENST00000540256 RCAN3Q9UKA8 241 aa9.4□□□□□ -0.9
PPFIBP1-211ENST00000540256 E9PCH4 1651 aa9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 RIMBP3CA6NJZ7 1639 aa9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 RIMBP3BA6NNM3 1639 aa9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 RIMBP3Q9UFD9 1639 aa9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 GPATCH8Q9UKJ3 1502 aaKnown RBP9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 CAMSAP2Q08AD1 1489 aa9.39□□□□□ -0.91
PPFIBP1-211ENST00000540256 GPRASP1Q5JY77 1395 aa9.38□□□□□ -0.91
PPFIBP1-211ENST00000540256 ABCA8O94911 1581 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms