RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 PLEKHD1A6NEE1 506 aa12.29□□□□□ -0.44
LDHA-217ENST00000539814 FAM69CQ0P6D2 419 aa12.29□□□□□ -0.44
LDHA-217ENST00000539814 KANK4Q5T7N3 995 aaPredicted RBP12.29□□□□□ -0.44
LDHA-217ENST00000539814 PPARGC1BQ86YN6 1023 aaKnown RBP12.29□□□□□ -0.44
LDHA-217ENST00000539814 PHF12Q96QT6 1004 aa12.29□□□□□ -0.44
LDHA-217ENST00000539814 DAXXQ9UER7 740 aaPredicted RBP12.29□□□□□ -0.44
LDHA-217ENST00000539814 TTC37Q6PGP7 1564 aa12.29□□□□□ -0.44
LDHA-217ENST00000539814 TROQ12816 1431 aaPredicted RBP12.28□□□□□ -0.44
LDHA-217ENST00000539814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.27□□□□□ -0.452e-17■■■□□ 14.8
LDHA-217ENST00000539814 MAP3K4Q9Y6R4 1608 aa12.26□□□□□ -0.45
LDHA-217ENST00000539814 C14orf37Q86TY3 774 aa12.26□□□□□ -0.45
LDHA-217ENST00000539814 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
LDHA-217ENST00000539814 LRRC9Q6ZRR7 1453 aa12.26□□□□□ -0.45
LDHA-217ENST00000539814 EHBP1L1Q8N3D4 1523 aa12.26□□□□□ -0.45
LDHA-217ENST00000539814 MTUS2Q5JR59 1369 aa12.25□□□□□ -0.45
LDHA-217ENST00000539814 GLI2P10070 1586 aa12.25□□□□□ -0.45
LDHA-217ENST00000539814 ABCA9Q8IUA7 1624 aa12.25□□□□□ -0.45
LDHA-217ENST00000539814 PPRC1Q5VV67 1664 aaKnown RBP12.25□□□□□ -0.45
LDHA-217ENST00000539814 CDK11AQ9UQ88 783 aaPredicted RBP12.24□□□□□ -0.45
LDHA-217ENST00000539814 MAP3K1Q13233 1512 aa12.23□□□□□ -0.45
LDHA-217ENST00000539814 STK24Q9Y6E0 443 aa12.23□□□□□ -0.45
LDHA-217ENST00000539814 BCL11BQ9C0K0 894 aaPredicted RBP12.22□□□□□ -0.45
LDHA-217ENST00000539814 SUPT6HQ7KZ85 1726 aaKnown RBP12.22□□□□□ -0.45
LDHA-217ENST00000539814 MYO5CQ9NQX4 1742 aa12.21□□□□□ -0.45
LDHA-217ENST00000539814 NCOA2Q15596 1464 aa12.21□□□□□ -0.46
LDHA-217ENST00000539814 CD109Q6YHK3 1445 aa12.2□□□□□ -0.46
LDHA-217ENST00000539814 CDC42BPAQ5VT25 1732 aa12.2□□□□□ -0.46
LDHA-217ENST00000539814 KIF12Q96FN5 646 aa12.2□□□□□ -0.46
LDHA-217ENST00000539814 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.19□□□□□ -0.46
LDHA-217ENST00000539814 GABBR2O75899 941 aa12.19□□□□□ -0.46
LDHA-217ENST00000539814 ZFP91Q96JP5 570 aaPredicted RBP12.19□□□□□ -0.46
LDHA-217ENST00000539814 SGIP1Q9BQI5 828 aa12.19□□□□□ -0.46
LDHA-217ENST00000539814 CDC42BPBQ9Y5S2 1711 aa12.18□□□□□ -0.46
LDHA-217ENST00000539814 PYGBP11216 843 aa12.18□□□□□ -0.46
LDHA-217ENST00000539814 PREX2Q70Z35 1606 aa12.18□□□□□ -0.46
LDHA-217ENST00000539814 CLCN6P51797 869 aa12.17□□□□□ -0.46
LDHA-217ENST00000539814 LMOD2Q6P5Q4 547 aa12.17□□□□□ -0.46
LDHA-217ENST00000539814 HOMEZQ8IX15 550 aa12.17□□□□□ -0.46
LDHA-217ENST00000539814 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
LDHA-217ENST00000539814 MAP3K13O43283 966 aa12.16□□□□□ -0.46
LDHA-217ENST00000539814 CHRM1P11229 460 aaPredicted RBP12.16□□□□□ -0.46
LDHA-217ENST00000539814 GPATCH8Q9UKJ3 1502 aaKnown RBP12.16□□□□□ -0.46
LDHA-217ENST00000539814 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
LDHA-217ENST00000539814 PLCH2O75038 1416 aa12.14□□□□□ -0.47
LDHA-217ENST00000539814 ITSN2Q9NZM3 1697 aa12.14□□□□□ -0.47
LDHA-217ENST00000539814 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
LDHA-217ENST00000539814 FANCAO15360 1455 aa12.14□□□□□ -0.47
LDHA-217ENST00000539814 GALR2O43603 387 aaPredicted RBP12.13□□□□□ -0.47
LDHA-217ENST00000539814 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
LDHA-217ENST00000539814 MS4A3Q96HJ5 214 aa12.13□□□□□ -0.47
LDHA-217ENST00000539814 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
LDHA-217ENST00000539814 SAMD9LQ8IVG5 1584 aa12.13□□□□□ -0.47
LDHA-217ENST00000539814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.12□□□□□ -0.47
LDHA-217ENST00000539814 TEX14Q8IWB6 1497 aa12.12□□□□□ -0.47
LDHA-217ENST00000539814 ZNF644Q9H582 1327 aaPredicted RBP12.11□□□□□ -0.47
LDHA-217ENST00000539814 WDR70Q9NW82 654 aa12.11□□□□□ -0.47
LDHA-217ENST00000539814 PCDHB13Q9Y5F0 798 aa12.11□□□□□ -0.47
LDHA-217ENST00000539814 COL17A1Q9UMD9 1497 aaPredicted RBP12.1□□□□□ -0.47
LDHA-217ENST00000539814 CFDP1Q9UEE9 299 aaPredicted RBP12.1□□□□□ -0.47
LDHA-217ENST00000539814 MYOM3Q5VTT5 1437 aa12.1□□□□□ -0.47
LDHA-217ENST00000539814 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
LDHA-217ENST00000539814 KDM6BO15054 1643 aa12.09□□□□□ -0.47
LDHA-217ENST00000539814 ARAP3Q8WWN8 1544 aa12.09□□□□□ -0.47
LDHA-217ENST00000539814 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
LDHA-217ENST00000539814 ADGRL1O94910 1474 aa12.08□□□□□ -0.47
LDHA-217ENST00000539814 ABCC1P33527 1531 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 SYCP2Q9BX26 1530 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 ARHGEF12Q9NZN5 1544 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 FRMPD1Q5SYB0 1578 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 CAMSAP2Q08AD1 1489 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 NEO1Q92859 1461 aa12.08□□□□□ -0.48
LDHA-217ENST00000539814 BRPF1P55201 1214 aaPredicted RBP12.07□□□□□ -0.48
LDHA-217ENST00000539814 EFCAB2Q5VUJ9 269 aa12.07□□□□□ -0.48
LDHA-217ENST00000539814 IFNL1Q8IU54 200 aa12.07□□□□□ -0.48
LDHA-217ENST00000539814 PTPN23Q9H3S7 1636 aa12.07□□□□□ -0.48
LDHA-217ENST00000539814 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
LDHA-217ENST00000539814 CADPS2Q86UW7 1296 aa12.06□□□□□ -0.48
LDHA-217ENST00000539814 SCAPERQ9BY12 1400 aa12.05□□□□□ -0.48
LDHA-217ENST00000539814 RAPGEF3O95398 923 aa12.05□□□□□ -0.48
LDHA-217ENST00000539814 RICTORQ6R327 1708 aa12.05□□□□□ -0.48
LDHA-217ENST00000539814 TRAPPC8Q9Y2L5 1435 aa12.04□□□□□ -0.48
LDHA-217ENST00000539814 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
LDHA-217ENST00000539814 PCDHB8Q9UN66 801 aa12.04□□□□□ -0.48
LDHA-217ENST00000539814 POGZQ7Z3K3 1410 aa12.03□□□□□ -0.48
LDHA-217ENST00000539814 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.48
LDHA-217ENST00000539814 FAM50AQ14320 339 aaKnown RBP12.02□□□□□ -0.49
LDHA-217ENST00000539814 ZNF467Q7Z7K2 595 aaPredicted RBP12.02□□□□□ -0.49
LDHA-217ENST00000539814 TRPC6Q9Y210 931 aa12.02□□□□□ -0.49
LDHA-217ENST00000539814 MIA2Q96PC5 1412 aa12.02□□□□□ -0.49
LDHA-217ENST00000539814 AFAP1Q8N556 730 aa12.01□□□□□ -0.49
LDHA-217ENST00000539814 TCOF1Q13428 1488 aaKnown RBP12.01□□□□□ -0.49
LDHA-217ENST00000539814 MBD5Q9P267 1494 aa12□□□□□ -0.49
LDHA-217ENST00000539814 PLEKHH2Q8IVE3 1493 aa11.99□□□□□ -0.49
LDHA-217ENST00000539814 CROCC2H7BZ55 1655 aa11.98□□□□□ -0.49
LDHA-217ENST00000539814 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
LDHA-217ENST00000539814 DCBLD2Q96PD2 775 aa11.98□□□□□ -0.49
LDHA-217ENST00000539814 KDM5CP41229 1560 aa11.97□□□□□ -0.49
LDHA-217ENST00000539814 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
LDHA-217ENST00000539814 ZNF518AQ6AHZ1 1483 aa11.97□□□□□ -0.49
LDHA-217ENST00000539814 CCDC141Q6ZP82 1450 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms