RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CDHR5Q9HBB8 845 aa14.11□□□□□ -0.15
TRAV11-201ENST00000539512 HOXB1P14653 301 aaPredicted RBP14.1□□□□□ -0.15
TRAV11-201ENST00000539512 TSR1Q2NL82 804 aaKnown RBP14.1□□□□□ -0.15
TRAV11-201ENST00000539512 CERKQ8TCT0 537 aa14.1□□□□□ -0.15
TRAV11-201ENST00000539512 BRPF1P55201 1214 aaPredicted RBP14.09□□□□□ -0.15
TRAV11-201ENST00000539512 C6orf132Q5T0Z8 1188 aa14.08□□□□□ -0.16
TRAV11-201ENST00000539512 IRF6O14896 467 aa14.07□□□□□ -0.16
TRAV11-201ENST00000539512 CCDC102AQ96A19 550 aa14.07□□□□□ -0.16
TRAV11-201ENST00000539512 KCNH8Q96L42 1107 aa14.05□□□□□ -0.16
TRAV11-201ENST00000539512 ADAM33Q9BZ11 813 aa14.05□□□□□ -0.16
TRAV11-201ENST00000539512 TRIM66O15016 1216 aa14.04□□□□□ -0.16
TRAV11-201ENST00000539512 FECHP22830 423 aa14.03□□□□□ -0.16
TRAV11-201ENST00000539512 NPDC1Q9NQX5 325 aaPredicted RBP14.02□□□□□ -0.17
TRAV11-201ENST00000539512 PTPREP23469 700 aa14.01□□□□□ -0.17
TRAV11-201ENST00000539512 PDE4DQ08499 809 aa14.01□□□□□ -0.17
TRAV11-201ENST00000539512 TMEM132AQ24JP5 1023 aa13.99□□□□□ -0.17
TRAV11-201ENST00000539512 BCL2L12Q9HB09 334 aa13.98□□□□□ -0.17
TRAV11-201ENST00000539512 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
TRAV11-201ENST00000539512 TTLL12Q14166 644 aaPredicted RBP13.97□□□□□ -0.17
TRAV11-201ENST00000539512 ERBB3P21860 1342 aa13.96□□□□□ -0.17
TRAV11-201ENST00000539512 PADI6Q6TGC4 694 aa13.95□□□□□ -0.18
TRAV11-201ENST00000539512 RBM27Q9P2N5 1060 aaKnown RBP13.95□□□□□ -0.18
TRAV11-201ENST00000539512 OATP04181 439 aa13.94□□□□□ -0.18
TRAV11-201ENST00000539512 PRSS12P56730 875 aa13.94□□□□□ -0.18
TRAV11-201ENST00000539512 GPBP1L1Q9HC44 474 aaPredicted RBP13.94□□□□□ -0.18
TRAV11-201ENST00000539512 PPP1R3GB7ZBB8 358 aa13.93□□□□□ -0.18
TRAV11-201ENST00000539512 KDM4CQ9H3R0 1056 aa13.93□□□□□ -0.18
TRAV11-201ENST00000539512 EMP3P54852 163 aa13.92□□□□□ -0.18
TRAV11-201ENST00000539512 AMHR2Q16671 573 aa13.92□□□□□ -0.18
TRAV11-201ENST00000539512 CDCA7LQ96GN5 454 aa13.92□□□□□ -0.18
TRAV11-201ENST00000539512 KCNK17Q96T54 332 aa13.92□□□□□ -0.18
TRAV11-201ENST00000539512 VARS2Q5ST30 1063 aaKnown RBP13.89□□□□□ -0.19
TRAV11-201ENST00000539512 ST18O60284 1047 aa13.88□□□□□ -0.19
TRAV11-201ENST00000539512 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
TRAV11-201ENST00000539512 COL9A1P20849 921 aa13.87□□□□□ -0.19
TRAV11-201ENST00000539512 CLCN1P35523 988 aa13.87□□□□□ -0.19
TRAV11-201ENST00000539512 FAM163AQ96GL9 167 aaPredicted RBP13.87□□□□□ -0.19
TRAV11-201ENST00000539512 PARP9Q8IXQ6 854 aa13.86□□□□□ -0.19
TRAV11-201ENST00000539512 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
TRAV11-201ENST00000539512 FAM161AQ3B820 660 aa13.85□□□□□ -0.19
TRAV11-201ENST00000539512 PACS2Q86VP3 889 aa13.85□□□□□ -0.19
TRAV11-201ENST00000539512 NBPF26B4DH59 902 aa13.84□□□□□ -0.19
TRAV11-201ENST00000539512 METTL3Q86U44 580 aaKnown RBP13.84□□□□□ -0.19
TRAV11-201ENST00000539512 MARVELD3Q96A59 401 aa13.84□□□□□ -0.19
TRAV11-201ENST00000539512 MDM2Q00987 491 aaPredicted RBP13.83□□□□□ -0.2
TRAV11-201ENST00000539512 TTC13Q8NBP0 860 aa13.83□□□□□ -0.2
TRAV11-201ENST00000539512 IL27Q8NEV9 243 aa13.82□□□□□ -0.2
TRAV11-201ENST00000539512 GPCPD1Q9NPB8 672 aa13.82□□□□□ -0.2
TRAV11-201ENST00000539512 FAM205CA6NFA0 338 aa13.81□□□□□ -0.2
TRAV11-201ENST00000539512 TRIM6-TRIM34B2RNG4 842 aa13.81□□□□□ -0.2
TRAV11-201ENST00000539512 DDRGK1Q96HY6 314 aa13.81□□□□□ -0.2
TRAV11-201ENST00000539512 ARHGAP33O14559 1287 aa13.8□□□□□ -0.2
TRAV11-201ENST00000539512 PBX2P40425 430 aa13.8□□□□□ -0.2
TRAV11-201ENST00000539512 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
TRAV11-201ENST00000539512 PXYLP1Q8TE99 480 aa13.8□□□□□ -0.2
TRAV11-201ENST00000539512 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
TRAV11-201ENST00000539512 PSEN2P49810 448 aa13.77□□□□□ -0.21
TRAV11-201ENST00000539512 TSKSQ9UJT2 592 aa13.77□□□□□ -0.21
TRAV11-201ENST00000539512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.76□□□□□ -0.21
TRAV11-201ENST00000539512 PROX2Q3B8N5 592 aa13.76□□□□□ -0.21
TRAV11-201ENST00000539512 NUDT18Q6ZVK8 323 aa13.76□□□□□ -0.21
TRAV11-201ENST00000539512 ONECUT3O60422 494 aaPredicted RBP13.75□□□□□ -0.21
TRAV11-201ENST00000539512 PHOX2BQ99453 314 aa13.75□□□□□ -0.21
TRAV11-201ENST00000539512 GTF3C3Q9Y5Q9 886 aa13.75□□□□□ -0.21
TRAV11-201ENST00000539512 TATDN2Q93075 761 aa13.74□□□□□ -0.21
TRAV11-201ENST00000539512 FAM117AQ9C073 453 aa13.74□□□□□ -0.21
TRAV11-201ENST00000539512 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
TRAV11-201ENST00000539512 ZNF687Q8N1G0 1237 aa13.73□□□□□ -0.21
TRAV11-201ENST00000539512 NLRP7Q8WX94 980 aa13.73□□□□□ -0.21
TRAV11-201ENST00000539512 ZBED2Q9BTP6 218 aa13.73□□□□□ -0.21
TRAV11-201ENST00000539512 AXIN2Q9Y2T1 843 aa13.73□□□□□ -0.21
TRAV11-201ENST00000539512 DNAJB2P25686 324 aa13.72□□□□□ -0.21
TRAV11-201ENST00000539512 KIAA1468Q9P260 1216 aa13.72□□□□□ -0.21
TRAV11-201ENST00000539512 RCCD1A6NED2 376 aa13.71□□□□□ -0.21
TRAV11-201ENST00000539512 SSTR3P32745 418 aaPredicted RBP13.7□□□□□ -0.22
TRAV11-201ENST00000539512 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
TRAV11-201ENST00000539512 EYA1Q99502 592 aa13.7□□□□□ -0.22
TRAV11-201ENST00000539512 MS4A1P11836 297 aa13.68□□□□□ -0.22
TRAV11-201ENST00000539512 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
TRAV11-201ENST00000539512 REPIN1Q9BWE0 567 aaKnown RBP13.68□□□□□ -0.22
TRAV11-201ENST00000539512 RABGEF1Q9UJ41 708 aa13.68□□□□□ -0.22
TRAV11-201ENST00000539512 SMAPO00193 183 aa13.67□□□□□ -0.22
TRAV11-201ENST00000539512 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
TRAV11-201ENST00000539512 TMUB1Q9BVT8 246 aa13.67□□□□□ -0.22
TRAV11-201ENST00000539512 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
TRAV11-201ENST00000539512 FAM217BQ9NTX9 383 aaPredicted RBP13.67□□□□□ -0.22
TRAV11-201ENST00000539512 SLC4A3P48751 1232 aa13.66□□□□□ -0.22
TRAV11-201ENST00000539512 DMRTA1Q5VZB9 504 aa13.65□□□□□ -0.22
TRAV11-201ENST00000539512 NBPF3Q9H094 633 aa13.65□□□□□ -0.22
TRAV11-201ENST00000539512 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
TRAV11-201ENST00000539512 ATP1B4Q9UN42 357 aaPredicted RBP13.64□□□□□ -0.23
TRAV11-201ENST00000539512 RSPH4AQ5TD94 716 aa13.63□□□□□ -0.23
TRAV11-201ENST00000539512 RSPH6AQ9H0K4 717 aa13.63□□□□□ -0.23
TRAV11-201ENST00000539512 PLEKHG3A1L390 1219 aa13.62□□□□□ -0.23
TRAV11-201ENST00000539512 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
TRAV11-201ENST00000539512 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
TRAV11-201ENST00000539512 SEPT9Q9UHD8 586 aaPredicted RBP13.62□□□□□ -0.23
TRAV11-201ENST00000539512 VPS9D1Q9Y2B5 631 aa13.62□□□□□ -0.23
TRAV11-201ENST00000539512 DDX11L8A8MPP1 907 aa13.61□□□□□ -0.23
TRAV11-201ENST00000539512 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 437.2 ms