RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 RAPGEF3O95398 923 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 SPNS2Q8IVW8 549 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 EFCAB5A4FU69 1503 aa14.97□□□□□ -0.01
CCDC144NL-203ENST00000539484 ARID4BQ4LE39 1312 aaPredicted RBP14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 SNPHO15079 494 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 ILDR1Q86SU0 546 aaPredicted RBP14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 CFAP74Q9C0B2 1584 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 OCEL1Q9H607 264 aa14.96□□□□□ -0.01
CCDC144NL-203ENST00000539484 ADAMTSL3P82987 1691 aa14.93□□□□□ -0.02
CCDC144NL-203ENST00000539484 UBTFP17480 764 aaKnown RBP14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 BCORL1Q5H9F3 1711 aa14.92□□□□□ -0.02
CCDC144NL-203ENST00000539484 DENND4BO75064 1496 aaPredicted RBP14.91□□□□□ -0.02
CCDC144NL-203ENST00000539484 RICTORQ6R327 1708 aa14.91□□□□□ -0.02
CCDC144NL-203ENST00000539484 FRMPD1Q5SYB0 1578 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 FANCAO15360 1455 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 ATP1B4Q9UN42 357 aaPredicted RBP14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 AKNAQ7Z591 1439 aa14.9□□□□□ -0.02
CCDC144NL-203ENST00000539484 PTPRMP28827 1452 aa14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 MARVELD3Q96A59 401 aa14.89□□□□□ -0.03
CCDC144NL-203ENST00000539484 ARHGEF40Q8TER5 1519 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 TTC37Q6PGP7 1564 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 MADDQ8WXG6 1647 aa14.87□□□□□ -0.03
CCDC144NL-203ENST00000539484 HECW1Q76N89 1606 aa14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 RIMS1Q86UR5 1692 aaKnown RBP14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 CDK13Q14004 1512 aaKnown RBP14.86□□□□□ -0.03
CCDC144NL-203ENST00000539484 FMN1Q68DA7 1419 aa14.85□□□□□ -0.03
CCDC144NL-203ENST00000539484 CDK11AQ9UQ88 783 aaPredicted RBP14.85□□□□□ -0.03
CCDC144NL-203ENST00000539484 POGZQ7Z3K3 1410 aa14.84□□□□□ -0.03
CCDC144NL-203ENST00000539484 MYO5CQ9NQX4 1742 aa14.84□□□□□ -0.03
CCDC144NL-203ENST00000539484 DCAF8Q5TAQ9 597 aa14.83□□□□□ -0.04
CCDC144NL-203ENST00000539484 ZFYVE16Q7Z3T8 1539 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 PYGBP11216 843 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 ZMYM4Q5VZL5 1548 aa14.82□□□□□ -0.04
CCDC144NL-203ENST00000539484 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
CCDC144NL-203ENST00000539484 FER1L4A9Z1Z3 1794 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PLCH2O75038 1416 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PCF11O94913 1555 aaKnown RBP14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 SCAPERQ9BY12 1400 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 PCDHB8Q9UN66 801 aa14.79□□□□□ -0.04
CCDC144NL-203ENST00000539484 KIF14Q15058 1648 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 ARHGAP35Q9NRY4 1499 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 EFCAB2Q5VUJ9 269 aa14.78□□□□□ -0.04
CCDC144NL-203ENST00000539484 CLIP1P30622 1438 aa14.77□□□□□ -0.04
CCDC144NL-203ENST00000539484 YEATS2Q9ULM3 1422 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 MLECQ14165 292 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 MYT1LQ9UL68 1186 aa14.76□□□□□ -0.05
CCDC144NL-203ENST00000539484 ARHGAP5Q13017 1502 aa14.74□□□□□ -0.05
CCDC144NL-203ENST00000539484 EMP3P54852 163 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 C3orf67Q6ZVT6 689 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 FBXO41Q8TF61 875 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 LMTK3Q96Q04 1460 aa14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 TROQ12816 1431 aaPredicted RBP14.73□□□□□ -0.05
CCDC144NL-203ENST00000539484 LRRIQ1Q96JM4 1722 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 SIGLEC1Q9BZZ2 1709 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 ATP10AO60312 1499 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 C9orf84Q5VXU9 1444 aa14.72□□□□□ -0.05
CCDC144NL-203ENST00000539484 ZNF518AQ6AHZ1 1483 aa14.71□□□□□ -0.05
CCDC144NL-203ENST00000539484 SETD1BQ9UPS6 1966 aaKnown RBP14.71□□□□□ -0.06
CCDC144NL-203ENST00000539484 CDC42BPBQ9Y5S2 1711 aa14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 CCDC18Q5T9S5 1454 aa14.69□□□□□ -0.06
CCDC144NL-203ENST00000539484 HSPA2P54652 639 aa14.68□□□□□ -0.06
CCDC144NL-203ENST00000539484 PDCD7Q8N8D1 485 aaKnown RBP14.68□□□□□ -0.06
CCDC144NL-203ENST00000539484 GOLGA2Q08379 1002 aa14.67□□□□□ -0.06
CCDC144NL-203ENST00000539484 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 MKRN3Q13064 507 aaKnown RBP14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 ARHGEF12Q9NZN5 1544 aa14.66□□□□□ -0.06
CCDC144NL-203ENST00000539484 KDM5CP41229 1560 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 AFAP1Q8N556 730 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 CASKIN1Q8WXD9 1431 aa14.65□□□□□ -0.06
CCDC144NL-203ENST00000539484 ESF1Q9H501 851 aaKnown RBP14.64□□□□□ -0.07
CCDC144NL-203ENST00000539484 ITSN2Q9NZM3 1697 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 FAM205CA6NFA0 338 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 HS3ST6Q96QI5 342 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
CCDC144NL-203ENST00000539484 DIP2CQ9Y2E4 1556 aa14.61□□□□□ -0.07
CCDC144NL-203ENST00000539484 POTEB3A0JP26 581 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 CEBPAP49715 358 aaPredicted RBP14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 POTEBQ6S5H4 581 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ZNF467Q7Z7K2 595 aaPredicted RBP14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 KRTAP3-3Q9BYR6 98 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 KRTAP3-2Q9BYR7 98 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 FYCO1Q9BQS8 1478 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ABCC1P33527 1531 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
CCDC144NL-203ENST00000539484 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
CCDC144NL-203ENST00000539484 MLH3Q9UHC1 1453 aa14.59□□□□□ -0.07
CCDC144NL-203ENST00000539484 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.59□□□□□ -0.072e-9■■■■■ 42.1
CCDC144NL-203ENST00000539484 FKBP8Q14318 412 aa14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 ZNF777Q9ULD5 760 aaPredicted RBP14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 UHRF1BP1Q6BDS2 1440 aa14.58□□□□□ -0.08
CCDC144NL-203ENST00000539484 KIDINS220Q9ULH0 1771 aa14.57□□□□□ -0.08
CCDC144NL-203ENST00000539484 TRAPPC8Q9Y2L5 1435 aa14.57□□□□□ -0.08
CCDC144NL-203ENST00000539484 C3P01024 1663 aa14.56□□□□□ -0.08
CCDC144NL-203ENST00000539484 CERKQ8TCT0 537 aa14.55□□□□□ -0.08
CCDC144NL-203ENST00000539484 AGLP35573 1532 aa14.55□□□□□ -0.08
CCDC144NL-203ENST00000539484 GSE1Q14687 1217 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms