RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 POLR1AO95602 1720 aaPredicted RBP8.91□□□□□ -0.98
CELF1-220ENST00000539455 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
CELF1-220ENST00000539455 MED14O60244 1454 aa8.9□□□□□ -0.98
CELF1-220ENST00000539455 CDK13Q14004 1512 aaKnown RBP8.9□□□□□ -0.99
CELF1-220ENST00000539455 RGS12O14924 1447 aa8.89□□□□□ -0.99
CELF1-220ENST00000539455 MEX3CQ5U5Q3 659 aaKnown RBP8.89□□□□□ -0.99
CELF1-220ENST00000539455 POTEDQ86YR6 584 aa8.89□□□□□ -0.99
CELF1-220ENST00000539455 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
CELF1-220ENST00000539455 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
CELF1-220ENST00000539455 NUTM2DQ5VT03 806 aaPredicted RBP8.88□□□□□ -0.99
CELF1-220ENST00000539455 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
CELF1-220ENST00000539455 YY1P25490 414 aa8.87□□□□□ -0.99
CELF1-220ENST00000539455 ABCC1P33527 1531 aa8.86□□□□□ -0.99
CELF1-220ENST00000539455 CLTCQ00610 1675 aaKnown RBP8.85□□□□□ -0.99
CELF1-220ENST00000539455 ROBO1Q9Y6N7 1651 aa8.85□□□□□ -0.99
CELF1-220ENST00000539455 SPATA31A6Q5VVP1 1343 aa8.84□□□□□ -0.99
CELF1-220ENST00000539455 DEPDC5O75140 1603 aa8.84□□□□□ -0.99
CELF1-220ENST00000539455 SENP3-EIF4A1A0A087X0R7 540 aa8.84□□□□□ -0.99
CELF1-220ENST00000539455 ATAD2Q6PL18 1390 aa8.84□□□□□ -0.99
CELF1-220ENST00000539455 TNRQ92752 1358 aa8.84□□□□□ -0.99
CELF1-220ENST00000539455 LRP5O75197 1615 aa8.83□□□□□ -1
CELF1-220ENST00000539455 THEMISQ8N1K5 641 aaPredicted RBP8.83□□□□□ -1
CELF1-220ENST00000539455 XIRP1Q702N8 1843 aaKnown RBP8.82□□□□□ -1
CELF1-220ENST00000539455 IQGAP1P46940 1657 aa8.82□□□□□ -1
CELF1-220ENST00000539455 ARHGAP5Q13017 1502 aa8.82□□□□□ -1
CELF1-220ENST00000539455 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.82□□□□□ -11e-6■■□□□ 12.3
CELF1-220ENST00000539455 SAMD9Q5K651 1589 aa8.82□□□□□ -1
CELF1-220ENST00000539455 AFF2P51816 1311 aa8.81□□□□□ -1
CELF1-220ENST00000539455 FBXO31Q5XUX0 539 aaPredicted RBP8.81□□□□□ -1
CELF1-220ENST00000539455 GGT6Q6P531 493 aa8.81□□□□□ -1
CELF1-220ENST00000539455 KDM5DQ9BY66 1539 aa8.8□□□□□ -1
CELF1-220ENST00000539455 KIDINS220Q9ULH0 1771 aa8.8□□□□□ -1
CELF1-220ENST00000539455 FAM135AQ9P2D6 1515 aa8.8□□□□□ -1
CELF1-220ENST00000539455 EEA1Q15075 1411 aa8.8□□□□□ -1
CELF1-220ENST00000539455 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
CELF1-220ENST00000539455 ITSN2Q9NZM3 1697 aa8.79□□□□□ -1
CELF1-220ENST00000539455 LRRC9Q6ZRR7 1453 aa8.79□□□□□ -1
CELF1-220ENST00000539455 TMEM94Q12767 1356 aa8.79□□□□□ -1
CELF1-220ENST00000539455 RBM6P78332 1123 aaKnown RBP8.79□□□□□ -1
CELF1-220ENST00000539455 PHLPP1O60346 1717 aa8.79□□□□□ -1
CELF1-220ENST00000539455 UGGT1Q9NYU2 1555 aa8.78□□□□□ -1
CELF1-220ENST00000539455 MYO5CQ9NQX4 1742 aa8.78□□□□□ -1
CELF1-220ENST00000539455 MYCNP04198 464 aaPredicted RBP8.78□□□□□ -1
CELF1-220ENST00000539455 COL16A1Q07092 1604 aaPredicted RBP8.78□□□□□ -1
CELF1-220ENST00000539455 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1.01
CELF1-220ENST00000539455 MAP3K1Q13233 1512 aa8.76□□□□□ -1.01
CELF1-220ENST00000539455 PSDA5PKW4 1024 aaPredicted RBP8.76□□□□□ -1.01
CELF1-220ENST00000539455 PRXQ9BXM0 1461 aa8.76□□□□□ -1.01
CELF1-220ENST00000539455 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
CELF1-220ENST00000539455 MIA2Q96PC5 1412 aa8.75□□□□□ -1.01
CELF1-220ENST00000539455 CCDC125Q86Z20 511 aa8.75□□□□□ -1.01
CELF1-220ENST00000539455 NLRP1Q9C000 1473 aa8.75□□□□□ -1.01
CELF1-220ENST00000539455 ZC3H13Q5T200 1668 aaKnown RBP8.75□□□□□ -1.01
CELF1-220ENST00000539455 PLXNC1O60486 1568 aa8.74□□□□□ -1.01
CELF1-220ENST00000539455 SLAIN2Q9P270 581 aa8.74□□□□□ -1.01
CELF1-220ENST00000539455 PZPP20742 1482 aa8.74□□□□□ -1.01
CELF1-220ENST00000539455 EP400Q96L91 3159 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 KIF14Q15058 1648 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 A2MP01023 1474 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 LOC105371045A0A1W2PR82 267 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 RANGAP1P46060 587 aaPredicted RBP8.73□□□□□ -1.01
CELF1-220ENST00000539455 DEFB132Q7Z7B7 95 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 SAMD9LQ8IVG5 1584 aa8.73□□□□□ -1.01
CELF1-220ENST00000539455 NHSL1Q5SYE7 1610 aa8.72□□□□□ -1.01
CELF1-220ENST00000539455 HRCP23327 699 aa8.72□□□□□ -1.01
CELF1-220ENST00000539455 NGLY1Q96IV0 654 aa8.72□□□□□ -1.01
CELF1-220ENST00000539455 SPAG9O60271 1321 aaKnown RBP8.72□□□□□ -1.01
CELF1-220ENST00000539455 NWD1Q149M9 1564 aa8.71□□□□□ -1.02
CELF1-220ENST00000539455 SCAF11Q99590 1463 aaKnown RBP8.7□□□□□ -1.02
CELF1-220ENST00000539455 SHPRHQ149N8 1683 aa8.7□□□□□ -1.02
CELF1-220ENST00000539455 PROSER2Q86WR7 435 aaPredicted RBP8.7□□□□□ -1.02
CELF1-220ENST00000539455 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
CELF1-220ENST00000539455 LTKP29376 864 aa8.69□□□□□ -1.02
CELF1-220ENST00000539455 U3KPZ7 1027 aaPredicted RBP8.69□□□□□ -1.02
CELF1-220ENST00000539455 MSH6P52701 1360 aa8.69□□□□□ -1.02
CELF1-220ENST00000539455 BCL9LQ86UU0 1499 aa8.69□□□□□ -1.02
CELF1-220ENST00000539455 KCNA6P17658 529 aa8.68□□□□□ -1.02
CELF1-220ENST00000539455 TROQ12816 1431 aaPredicted RBP8.68□□□□□ -1.02
CELF1-220ENST00000539455 TIAM1Q13009 1591 aa8.68□□□□□ -1.02
CELF1-220ENST00000539455 BLMP54132 1417 aaPredicted RBP8.67□□□□□ -1.02
CELF1-220ENST00000539455 PRDM15P57071 1507 aaPredicted RBP8.67□□□□□ -1.02
CELF1-220ENST00000539455 C1QTNF8P60827 252 aa8.67□□□□□ -1.02
CELF1-220ENST00000539455 AHDC1Q5TGY3 1603 aaPredicted RBP8.67□□□□□ -1.02
CELF1-220ENST00000539455 DIP2AQ14689 1571 aa8.66□□□□□ -1.02
CELF1-220ENST00000539455 ATXN8OSP0DMR3 200 aa8.66□□□□□ -1.02
CELF1-220ENST00000539455 TXNDC2Q86VQ3 553 aa8.66□□□□□ -1.02
CELF1-220ENST00000539455 CDK11AQ9UQ88 783 aaPredicted RBP8.66□□□□□ -1.02
CELF1-220ENST00000539455 CEP350Q5VT06 3117 aa8.66□□□□□ -1.02
CELF1-220ENST00000539455 CDC42BPBQ9Y5S2 1711 aa8.66□□□□□ -1.02
CELF1-220ENST00000539455 NCOA2Q15596 1464 aa8.65□□□□□ -1.02
CELF1-220ENST00000539455 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
CELF1-220ENST00000539455 ARHGAP23Q9P227 1491 aa8.64□□□□□ -1.03
CELF1-220ENST00000539455 CLIP1P30622 1438 aa8.64□□□□□ -1.03
CELF1-220ENST00000539455 HNRNPMP52272 730 aaKnown RBP eCLIP8.64□□□□□ -1.03
CELF1-220ENST00000539455 PREX2Q70Z35 1606 aa8.64□□□□□ -1.03
CELF1-220ENST00000539455 INO80Q9ULG1 1556 aaPredicted RBP8.64□□□□□ -1.03
CELF1-220ENST00000539455 ABCC3O15438 1527 aa8.64□□□□□ -1.03
CELF1-220ENST00000539455 SYCP2Q9BX26 1530 aa8.64□□□□□ -1.03
CELF1-220ENST00000539455 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
CELF1-220ENST00000539455 SAMD1Q6SPF0 538 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms