RNA–Protein interactions for RNA: ENST00000539212.5

PDCD2-207, Transcript of programmed cell death 2, humanhuman

TSL 3

Gene PDCD2, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-207ENST00000539212 MAP3K1Q13233 1512 aa27.4■■□□□ 1.98
PDCD2-207ENST00000539212 TCOF1Q13428 1488 aaKnown RBP27.39■■□□□ 1.98
PDCD2-207ENST00000539212 POLR1AO95602 1720 aaPredicted RBP27.38■■□□□ 1.97
PDCD2-207ENST00000539212 A2ML1A8K2U0 1454 aa27.38■■□□□ 1.97
PDCD2-207ENST00000539212 RNF17Q9BXT8 1623 aaKnown RBP27.38■■□□□ 1.97
PDCD2-207ENST00000539212 FAM135AQ9P2D6 1515 aa27.37■■□□□ 1.97
PDCD2-207ENST00000539212 RSPH4AQ5TD94 716 aa27.37■■□□□ 1.97
PDCD2-207ENST00000539212 PZPP20742 1482 aa27.37■■□□□ 1.97
PDCD2-207ENST00000539212 FBXO31Q5XUX0 539 aaPredicted RBP27.36■■□□□ 1.97
PDCD2-207ENST00000539212 MYOM3Q5VTT5 1437 aa27.35■■□□□ 1.97
PDCD2-207ENST00000539212 ZNF335Q9H4Z2 1342 aaPredicted RBP27.33■■□□□ 1.97
PDCD2-207ENST00000539212 CROCC2H7BZ55 1655 aa27.33■■□□□ 1.97
PDCD2-207ENST00000539212 TNRQ92752 1358 aa27.33■■□□□ 1.97
PDCD2-207ENST00000539212 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
PDCD2-207ENST00000539212 TSPY4P0CV99 314 aa27.32■■□□□ 1.96
PDCD2-207ENST00000539212 TSPY10P0CW01 314 aa27.32■■□□□ 1.96
PDCD2-207ENST00000539212 CEP152O94986 1710 aa27.32■■□□□ 1.96
PDCD2-207ENST00000539212 MROH1Q8NDA8 1641 aa27.31■■□□□ 1.96
PDCD2-207ENST00000539212 WASHC2CQ9Y4E1 1318 aa27.31■■□□□ 1.96
PDCD2-207ENST00000539212 NEURL4Q96JN8 1562 aa27.31■■□□□ 1.96
PDCD2-207ENST00000539212 ZC3H13Q5T200 1668 aaKnown RBP27.3■■□□□ 1.96
PDCD2-207ENST00000539212 MIA2Q96PC5 1412 aa27.29■■□□□ 1.96
PDCD2-207ENST00000539212 IQSEC2Q5JU85 1478 aa27.29■■□□□ 1.96
PDCD2-207ENST00000539212 ABCC3O15438 1527 aa27.29■■□□□ 1.96
PDCD2-207ENST00000539212 PKD2Q13563 968 aa27.28■■□□□ 1.96
PDCD2-207ENST00000539212 PTPN23Q9H3S7 1636 aa27.26■■□□□ 1.95
PDCD2-207ENST00000539212 CFAP65Q6ZU64 1925 aaKnown RBP27.25■■□□□ 1.95
PDCD2-207ENST00000539212 SPATA31D1Q6ZQQ2 1576 aa27.2■■□□□ 1.94
PDCD2-207ENST00000539212 UGGT1Q9NYU2 1555 aa27.2■■□□□ 1.94
PDCD2-207ENST00000539212 DUOX2Q9NRD8 1548 aa27.2■■□□□ 1.94
PDCD2-207ENST00000539212 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.19■■□□□ 1.94
PDCD2-207ENST00000539212 NLRP1Q9C000 1473 aa27.19■■□□□ 1.94
PDCD2-207ENST00000539212 ABCC5O15440 1437 aa27.17■■□□□ 1.94
PDCD2-207ENST00000539212 ERVK-7P63135 1459 aa27.16■■□□□ 1.94
PDCD2-207ENST00000539212 SHANK2Q9UPX8 1470 aa27.16■■□□□ 1.94
PDCD2-207ENST00000539212 PRDM15P57071 1507 aaPredicted RBP27.14■■□□□ 1.94
PDCD2-207ENST00000539212 KIF15Q9NS87 1388 aa27.13■■□□□ 1.93
PDCD2-207ENST00000539212 DEPDC5O75140 1603 aa27.12■■□□□ 1.93
PDCD2-207ENST00000539212 IQGAP1P46940 1657 aa27.12■■□□□ 1.93
PDCD2-207ENST00000539212 DAPK1P53355 1430 aa27.12■■□□□ 1.93
PDCD2-207ENST00000539212 VWDEQ8N2E2 1590 aa27.12■■□□□ 1.93
PDCD2-207ENST00000539212 UBR1Q8IWV7 1749 aa27.12■■□□□ 1.93
PDCD2-207ENST00000539212 FGD6Q6ZV73 1430 aa27.11■■□□□ 1.93
PDCD2-207ENST00000539212 DISP3Q9P2K9 1392 aa27.1■■□□□ 1.93
PDCD2-207ENST00000539212 APLP2Q06481 763 aa27.1■■□□□ 1.93
PDCD2-207ENST00000539212 UBAP1LF5GYI3 381 aa27.09■■□□□ 1.93
PDCD2-207ENST00000539212 ERBINQ96RT1 1412 aa27.08■■□□□ 1.93
PDCD2-207ENST00000539212 RRP7BPQ9NSQ0 103 aa27.08■■□□□ 1.93
PDCD2-207ENST00000539212 NPHP4O75161 1426 aaPredicted RBP27.07■■□□□ 1.92
PDCD2-207ENST00000539212 STRCP1A6NGW2 1772 aa27.07■■□□□ 1.92
PDCD2-207ENST00000539212 CPS1P31327 1500 aa27.06■■□□□ 1.92
PDCD2-207ENST00000539212 ANKLE2Q86XL3 938 aa27.06■■□□□ 1.92
PDCD2-207ENST00000539212 THEMISQ8N1K5 641 aaPredicted RBP27.06■■□□□ 1.92
PDCD2-207ENST00000539212 MED14O60244 1454 aa27.06■■□□□ 1.92
PDCD2-207ENST00000539212 ILDR2Q71H61 639 aa27■■□□□ 1.91
PDCD2-207ENST00000539212 CHIC2Q9UKJ5 165 aa27■■□□□ 1.91
PDCD2-207ENST00000539212 PIK3C2BO00750 1634 aa27■■□□□ 1.91
PDCD2-207ENST00000539212 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.99■■□□□ 1.91
PDCD2-207ENST00000539212 ARHGAP31Q2M1Z3 1444 aa26.98■■□□□ 1.91
PDCD2-207ENST00000539212 ALKQ9UM73 1620 aa26.95■■□□□ 1.91
PDCD2-207ENST00000539212 ANKRD30AQ9BXX3 1397 aa26.94■■□□□ 1.9
PDCD2-207ENST00000539212 SCAF1Q9H7N4 1312 aaKnown RBP26.92■■□□□ 1.9
PDCD2-207ENST00000539212 PIP4K2BP78356 416 aa26.92■■□□□ 1.9
PDCD2-207ENST00000539212 SCAF11Q99590 1463 aaKnown RBP26.92■■□□□ 1.9
PDCD2-207ENST00000539212 ARHGAP23Q9P227 1491 aa26.92■■□□□ 1.9
PDCD2-207ENST00000539212 SYNMO15061 1565 aa26.92■■□□□ 1.9
PDCD2-207ENST00000539212 SLIT1O75093 1534 aa26.91■■□□□ 1.9
PDCD2-207ENST00000539212 LMTK2Q8IWU2 1503 aa26.91■■□□□ 1.9
PDCD2-207ENST00000539212 ADGRL2O95490 1459 aa26.9■■□□□ 1.9
PDCD2-207ENST00000539212 KANK1Q14678 1352 aa26.89■■□□□ 1.9
PDCD2-207ENST00000539212 EFCAB6Q5THR3 1501 aa26.89■■□□□ 1.89
PDCD2-207ENST00000539212 LRRC7Q96NW7 1537 aa26.88■■□□□ 1.89
PDCD2-207ENST00000539212 FAM50AQ14320 339 aaKnown RBP26.87■■□□□ 1.89
PDCD2-207ENST00000539212 XIRP1Q702N8 1843 aaKnown RBP26.86■■□□□ 1.89
PDCD2-207ENST00000539212 LTKP29376 864 aa26.86■■□□□ 1.89
PDCD2-207ENST00000539212 KDM5AP29375 1690 aaKnown RBP26.85■■□□□ 1.89
PDCD2-207ENST00000539212 HSPA1LP34931 641 aa26.84■■□□□ 1.89
PDCD2-207ENST00000539212 TOM1O60784 492 aa26.83■■□□□ 1.89
PDCD2-207ENST00000539212 TXNDC2Q86VQ3 553 aa26.82■■□□□ 1.88
PDCD2-207ENST00000539212 MYO5BQ9ULV0 1848 aa26.81■■□□□ 1.88
PDCD2-207ENST00000539212 TMEM2Q9UHN6 1383 aa26.79■■□□□ 1.88
PDCD2-207ENST00000539212 ADGRB3O60242 1522 aa26.79■■□□□ 1.88
PDCD2-207ENST00000539212 NOS1P29475 1434 aa26.78■■□□□ 1.88
PDCD2-207ENST00000539212 MED1Q15648 1581 aaPredicted RBP26.78■■□□□ 1.88
PDCD2-207ENST00000539212 TET3O43151 1660 aa26.77■■□□□ 1.88
PDCD2-207ENST00000539212 ANKRD50Q9ULJ7 1429 aa26.77■■□□□ 1.88
PDCD2-207ENST00000539212 IDI1Q13907 227 aa26.77■■□□□ 1.88
PDCD2-207ENST00000539212 GCC2Q8IWJ2 1684 aa26.76■■□□□ 1.87
PDCD2-207ENST00000539212 UNC13BO14795 1591 aa26.75■■□□□ 1.87
PDCD2-207ENST00000539212 STAG3Q9UJ98 1225 aa26.75■■□□□ 1.87
PDCD2-207ENST00000539212 SENP3Q9H4L4 574 aaPredicted RBP26.74■■□□□ 1.87
PDCD2-207ENST00000539212 SOCS7O14512 581 aa26.73■■□□□ 1.87
PDCD2-207ENST00000539212 EID1Q9Y6B2 187 aa26.73■■□□□ 1.87
PDCD2-207ENST00000539212 E9PCH4 1651 aa26.7■■□□□ 1.86
PDCD2-207ENST00000539212 RPRD2Q5VT52 1461 aaKnown RBP26.68■■□□□ 1.86
PDCD2-207ENST00000539212 PPARGC1BQ86YN6 1023 aaKnown RBP26.65■■□□□ 1.86
PDCD2-207ENST00000539212 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
PDCD2-207ENST00000539212 IQGAP3Q86VI3 1631 aa26.64■■□□□ 1.85
PDCD2-207ENST00000539212 SLC26A8Q96RN1 970 aa26.63■■□□□ 1.85
PDCD2-207ENST00000539212 NWD1Q149M9 1564 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms