RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
TUBD1-206ENST00000539018 LCE2DQ5TA82 110 aaPredicted RBP14.15□□□□□ -0.14
TUBD1-206ENST00000539018 TSR1Q2NL82 804 aaKnown RBP14.14□□□□□ -0.15
TUBD1-206ENST00000539018 VARS2Q5ST30 1063 aaKnown RBP14.14□□□□□ -0.15
TUBD1-206ENST00000539018 CDHR5Q9HBB8 845 aa14.13□□□□□ -0.15
TUBD1-206ENST00000539018 C6orf132Q5T0Z8 1188 aa14.12□□□□□ -0.15
TUBD1-206ENST00000539018 BCL2L12Q9HB09 334 aa14.12□□□□□ -0.15
TUBD1-206ENST00000539018 FAM205CA6NFA0 338 aa14.11□□□□□ -0.15
TUBD1-206ENST00000539018 FCHSD2O94868 740 aa14.11□□□□□ -0.15
TUBD1-206ENST00000539018 GPR37O15354 613 aa14.1□□□□□ -0.15
TUBD1-206ENST00000539018 SHROOM4Q9ULL8 1493 aa14.1□□□□□ -0.15
TUBD1-206ENST00000539018 PTGDRQ13258 359 aa14.09□□□□□ -0.15
TUBD1-206ENST00000539018 RB1CC1Q8TDY2 1594 aa14.09□□□□□ -0.15
TUBD1-206ENST00000539018 ZMYND10O75800 440 aa14.08□□□□□ -0.16
TUBD1-206ENST00000539018 PTPREP23469 700 aa14.07□□□□□ -0.16
TUBD1-206ENST00000539018 HIC1Q14526 733 aa14.07□□□□□ -0.16
TUBD1-206ENST00000539018 CERKQ8TCT0 537 aa14.06□□□□□ -0.16
TUBD1-206ENST00000539018 NPDC1Q9NQX5 325 aaPredicted RBP14.06□□□□□ -0.16
TUBD1-206ENST00000539018 HS3ST6Q96QI5 342 aa14.05□□□□□ -0.16
TUBD1-206ENST00000539018 GNPATO15228 680 aa14.04□□□□□ -0.16
TUBD1-206ENST00000539018 BARGINQ6ZT62 677 aa14.04□□□□□ -0.16
TUBD1-206ENST00000539018 KCNH8Q96L42 1107 aa14.04□□□□□ -0.16
TUBD1-206ENST00000539018 ZNF687Q8N1G0 1237 aa14.02□□□□□ -0.17
TUBD1-206ENST00000539018 KCNK17Q96T54 332 aa14.02□□□□□ -0.17
TUBD1-206ENST00000539018 POTEMA6NI47 508 aa14.01□□□□□ -0.17
TUBD1-206ENST00000539018 PPP1R3GB7ZBB8 358 aa14.01□□□□□ -0.17
TUBD1-206ENST00000539018 POTEGQ6S5H5 508 aa14.01□□□□□ -0.17
TUBD1-206ENST00000539018 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
TUBD1-206ENST00000539018 POTEB3A0JP26 581 aa13.99□□□□□ -0.17
TUBD1-206ENST00000539018 COL9A1P20849 921 aa13.99□□□□□ -0.17
TUBD1-206ENST00000539018 PBX2P40425 430 aa13.99□□□□□ -0.17
TUBD1-206ENST00000539018 POTEBQ6S5H4 581 aa13.99□□□□□ -0.17
TUBD1-206ENST00000539018 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
TUBD1-206ENST00000539018 SCRIBQ14160 1630 aa13.97□□□□□ -0.17
TUBD1-206ENST00000539018 FECHP22830 423 aa13.96□□□□□ -0.17
TUBD1-206ENST00000539018 PSEN2P49810 448 aa13.96□□□□□ -0.17
TUBD1-206ENST00000539018 MAP2K5Q13163 448 aa13.96□□□□□ -0.17
TUBD1-206ENST00000539018 SLC24A3Q9HC58 644 aa13.96□□□□□ -0.17
TUBD1-206ENST00000539018 RBM27Q9P2N5 1060 aaKnown RBP13.96□□□□□ -0.17
TUBD1-206ENST00000539018 PRSS12P56730 875 aa13.95□□□□□ -0.18
TUBD1-206ENST00000539018 POTEEQ6S8J3 1075 aa13.95□□□□□ -0.18
TUBD1-206ENST00000539018 AXIN2Q9Y2T1 843 aa13.95□□□□□ -0.18
TUBD1-206ENST00000539018 PADI6Q6TGC4 694 aa13.94□□□□□ -0.18
TUBD1-206ENST00000539018 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
TUBD1-206ENST00000539018 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
TUBD1-206ENST00000539018 AK7Q96M32 723 aa13.9□□□□□ -0.18
TUBD1-206ENST00000539018 IRF6O14896 467 aa13.89□□□□□ -0.19
TUBD1-206ENST00000539018 TTC13Q8NBP0 860 aa13.89□□□□□ -0.19
TUBD1-206ENST00000539018 ZBED2Q9BTP6 218 aa13.89□□□□□ -0.19
TUBD1-206ENST00000539018 TRIM6-TRIM34B2RNG4 842 aa13.88□□□□□ -0.19
TUBD1-206ENST00000539018 DMRTA1Q5VZB9 504 aa13.88□□□□□ -0.19
TUBD1-206ENST00000539018 CCDC102AQ96A19 550 aa13.88□□□□□ -0.19
TUBD1-206ENST00000539018 PROX2Q3B8N5 592 aa13.87□□□□□ -0.19
TUBD1-206ENST00000539018 TSKSQ9UJT2 592 aa13.86□□□□□ -0.19
TUBD1-206ENST00000539018 ONECUT3O60422 494 aaPredicted RBP13.85□□□□□ -0.19
TUBD1-206ENST00000539018 SLC4A5Q9BY07 1137 aa13.85□□□□□ -0.19
TUBD1-206ENST00000539018 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
TUBD1-206ENST00000539018 PACS2Q86VP3 889 aa13.84□□□□□ -0.19
TUBD1-206ENST00000539018 ADGRG1Q9Y653 693 aa13.83□□□□□ -0.2
TUBD1-206ENST00000539018 LSM11P83369 360 aaKnown RBP eCLIP13.82□□□□□ -0.2
TUBD1-206ENST00000539018 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
TUBD1-206ENST00000539018 OATP04181 439 aa13.81□□□□□ -0.2
TUBD1-206ENST00000539018 FAM161AQ3B820 660 aa13.81□□□□□ -0.2
TUBD1-206ENST00000539018 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
TUBD1-206ENST00000539018 TRIM66O15016 1216 aa13.8□□□□□ -0.2
TUBD1-206ENST00000539018 KIAA1468Q9P260 1216 aa13.8□□□□□ -0.2
TUBD1-206ENST00000539018 VPS9D1Q9Y2B5 631 aa13.8□□□□□ -0.2
TUBD1-206ENST00000539018 TK2O00142 265 aa13.79□□□□□ -0.2
TUBD1-206ENST00000539018 RABGEF1Q9UJ41 708 aa13.79□□□□□ -0.2
TUBD1-206ENST00000539018 UNC13AQ9UPW8 1703 aa13.78□□□□□ -0.2
TUBD1-206ENST00000539018 RBM46Q8TBY0 533 aaKnown RBP13.78□□□□□ -0.2
TUBD1-206ENST00000539018 PNMA3Q9UL41 463 aa13.78□□□□□ -0.2
TUBD1-206ENST00000539018 NUDT18Q6ZVK8 323 aa13.77□□□□□ -0.21
TUBD1-206ENST00000539018 METTL3Q86U44 580 aaKnown RBP13.77□□□□□ -0.21
TUBD1-206ENST00000539018 TATDN2Q93075 761 aa13.77□□□□□ -0.21
TUBD1-206ENST00000539018 PXYLP1Q8TE99 480 aa13.76□□□□□ -0.21
TUBD1-206ENST00000539018 PCDH10Q9P2E7 1040 aa13.76□□□□□ -0.21
TUBD1-206ENST00000539018 ADGRD1Q6QNK2 874 aa13.75□□□□□ -0.21
TUBD1-206ENST00000539018 ANKRD13DQ6ZTN6 518 aa13.75□□□□□ -0.21
TUBD1-206ENST00000539018 C3orf80F5H4A9 247 aa13.74□□□□□ -0.21
TUBD1-206ENST00000539018 SMAPO00193 183 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 PDE4DQ08499 809 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 AMHR2Q16671 573 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 EYA1Q99502 592 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 KRTAP3-3Q9BYR6 98 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 KRTAP3-2Q9BYR7 98 aa13.73□□□□□ -0.21
TUBD1-206ENST00000539018 NBPF3Q9H094 633 aa13.72□□□□□ -0.21
TUBD1-206ENST00000539018 PHOX2BQ99453 314 aa13.71□□□□□ -0.21
TUBD1-206ENST00000539018 NEUROD2Q15784 382 aa13.7□□□□□ -0.22
TUBD1-206ENST00000539018 SEPT9Q9UHD8 586 aaPredicted RBP13.7□□□□□ -0.22
TUBD1-206ENST00000539018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.69□□□□□ -0.22
TUBD1-206ENST00000539018 RCCD1A6NED2 376 aa13.68□□□□□ -0.22
TUBD1-206ENST00000539018 BHMG1C9JSJ3 638 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-206ENST00000539018 DNAJB2P25686 324 aa13.68□□□□□ -0.22
TUBD1-206ENST00000539018 BRPF1P55201 1214 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-206ENST00000539018 TTLL12Q14166 644 aaPredicted RBP13.68□□□□□ -0.22
TUBD1-206ENST00000539018 NLRP7Q8WX94 980 aa13.67□□□□□ -0.22
TUBD1-206ENST00000539018 HRO43593 1189 aa13.66□□□□□ -0.22
TUBD1-206ENST00000539018 CLCN1P35523 988 aa13.66□□□□□ -0.22
TUBD1-206ENST00000539018 MDM2Q00987 491 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms