RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 PLA2R1Q13018 1463 aa20.86■□□□□ 0.93
ATL3-203ENST00000538786 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
ATL3-203ENST00000538786 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.93
ATL3-203ENST00000538786 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.93
ATL3-203ENST00000538786 DEPDC5O75140 1603 aa20.83■□□□□ 0.92
ATL3-203ENST00000538786 SPATA31E1Q6ZUB1 1445 aa20.82■□□□□ 0.92
ATL3-203ENST00000538786 POGZQ7Z3K3 1410 aa20.82■□□□□ 0.92
ATL3-203ENST00000538786 MYT1LQ9UL68 1186 aa20.82■□□□□ 0.92
ATL3-203ENST00000538786 EIF2AK4Q9P2K8 1649 aaKnown RBP20.81■□□□□ 0.92
ATL3-203ENST00000538786 NEO1Q92859 1461 aa20.81■□□□□ 0.92
ATL3-203ENST00000538786 KDM5CP41229 1560 aa20.8■□□□□ 0.92
ATL3-203ENST00000538786 WASHC2AQ641Q2 1341 aa20.8■□□□□ 0.92
ATL3-203ENST00000538786 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
ATL3-203ENST00000538786 ZNF326Q5BKZ1 582 aaKnown RBP20.78■□□□□ 0.92
ATL3-203ENST00000538786 RALGAPBQ86X10 1494 aa20.78■□□□□ 0.92
ATL3-203ENST00000538786 KANK1Q14678 1352 aa20.78■□□□□ 0.92
ATL3-203ENST00000538786 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
ATL3-203ENST00000538786 MLH3Q9UHC1 1453 aa20.77■□□□□ 0.92
ATL3-203ENST00000538786 DCAF11Q8TEB1 546 aa20.77■□□□□ 0.92
ATL3-203ENST00000538786 KIF3BO15066 747 aa20.76■□□□□ 0.91
ATL3-203ENST00000538786 PRDM15P57071 1507 aaPredicted RBP20.75■□□□□ 0.91
ATL3-203ENST00000538786 GLI2P10070 1586 aa20.74■□□□□ 0.91
ATL3-203ENST00000538786 ANP32CO43423 234 aa20.74■□□□□ 0.91
ATL3-203ENST00000538786 E9PCH4 1651 aa20.74■□□□□ 0.91
ATL3-203ENST00000538786 MAP3K4Q9Y6R4 1608 aa20.74■□□□□ 0.91
ATL3-203ENST00000538786 TET3O43151 1660 aa20.73■□□□□ 0.91
ATL3-203ENST00000538786 A2MP01023 1474 aa20.73■□□□□ 0.91
ATL3-203ENST00000538786 KDM2AQ9Y2K7 1162 aa20.73■□□□□ 0.91
ATL3-203ENST00000538786 USP47Q96K76 1375 aa20.73■□□□□ 0.91
ATL3-203ENST00000538786 CCDC7Q96M83 1385 aa20.73■□□□□ 0.91
ATL3-203ENST00000538786 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
ATL3-203ENST00000538786 MROH1Q8NDA8 1641 aa20.71■□□□□ 0.91
ATL3-203ENST00000538786 PTPRTO14522 1441 aa20.71■□□□□ 0.91
ATL3-203ENST00000538786 TRPM2O94759 1503 aa20.71■□□□□ 0.91
ATL3-203ENST00000538786 C11orf95C9JLR9 678 aaPredicted RBP20.7■□□□□ 0.91
ATL3-203ENST00000538786 PRAG1Q86YV5 1406 aa20.69■□□□□ 0.9
ATL3-203ENST00000538786 RGL3Q3MIN7 710 aa20.69■□□□□ 0.9
ATL3-203ENST00000538786 CCER2I3L3R5 266 aa20.68■□□□□ 0.9
ATL3-203ENST00000538786 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
ATL3-203ENST00000538786 CNTLNQ9NXG0 1405 aa20.66■□□□□ 0.9
ATL3-203ENST00000538786 KIF7Q2M1P5 1343 aa20.66■□□□□ 0.9
ATL3-203ENST00000538786 RNF17Q9BXT8 1623 aaKnown RBP20.66■□□□□ 0.9
ATL3-203ENST00000538786 FRMPD1Q5SYB0 1578 aa20.66■□□□□ 0.9
ATL3-203ENST00000538786 SCAF1Q9H7N4 1312 aaKnown RBP20.65■□□□□ 0.9
ATL3-203ENST00000538786 LMTK2Q8IWU2 1503 aa20.65■□□□□ 0.9
ATL3-203ENST00000538786 SPHKAPQ2M3C7 1700 aa20.65■□□□□ 0.9
ATL3-203ENST00000538786 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
ATL3-203ENST00000538786 POLR1AO95602 1720 aaPredicted RBP20.64■□□□□ 0.9
ATL3-203ENST00000538786 ROCK2O75116 1388 aaKnown RBP20.64■□□□□ 0.9
ATL3-203ENST00000538786 TRPM1Q7Z4N2 1603 aa20.63■□□□□ 0.89
ATL3-203ENST00000538786 ABCA6Q8N139 1617 aa20.63■□□□□ 0.89
ATL3-203ENST00000538786 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
ATL3-203ENST00000538786 DIP2BQ9P265 1576 aa20.63■□□□□ 0.89
ATL3-203ENST00000538786 ARID4BQ4LE39 1312 aaPredicted RBP20.62■□□□□ 0.89
ATL3-203ENST00000538786 BCORL1Q5H9F3 1711 aa20.62■□□□□ 0.89
ATL3-203ENST00000538786 FAM69CQ0P6D2 419 aa20.61■□□□□ 0.89
ATL3-203ENST00000538786 GPRASP1Q5JY77 1395 aa20.61■□□□□ 0.89
ATL3-203ENST00000538786 RICTORQ6R327 1708 aa20.6■□□□□ 0.89
ATL3-203ENST00000538786 CLTCL1P53675 1640 aa20.6■□□□□ 0.89
ATL3-203ENST00000538786 STAC3Q96MF2 364 aa20.59■□□□□ 0.89
ATL3-203ENST00000538786 CEP152O94986 1710 aa20.59■□□□□ 0.89
ATL3-203ENST00000538786 AEBP2Q6ZN18 517 aaPredicted RBP20.58■□□□□ 0.88
ATL3-203ENST00000538786 DIP2CQ9Y2E4 1556 aa20.58■□□□□ 0.88
ATL3-203ENST00000538786 PPRC1Q5VV67 1664 aaKnown RBP20.58■□□□□ 0.88
ATL3-203ENST00000538786 NEURL4Q96JN8 1562 aa20.57■□□□□ 0.88
ATL3-203ENST00000538786 LAMC1P11047 1609 aa20.57■□□□□ 0.88
ATL3-203ENST00000538786 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
ATL3-203ENST00000538786 NBPF1Q3BBV0 1214 aa20.55■□□□□ 0.88
ATL3-203ENST00000538786 GGT6Q6P531 493 aa20.54■□□□□ 0.88
ATL3-203ENST00000538786 ZMYM4Q5VZL5 1548 aa20.52■□□□□ 0.87
ATL3-203ENST00000538786 ABCC3O15438 1527 aa20.51■□□□□ 0.87
ATL3-203ENST00000538786 YEATS2Q9ULM3 1422 aa20.51■□□□□ 0.87
ATL3-203ENST00000538786 MADDQ8WXG6 1647 aa20.51■□□□□ 0.87
ATL3-203ENST00000538786 WASHC2CQ9Y4E1 1318 aa20.5■□□□□ 0.87
ATL3-203ENST00000538786 DNAJC5Q9H3Z4 198 aa20.5■□□□□ 0.87
ATL3-203ENST00000538786 GTF3C3Q9Y5Q9 886 aa20.5■□□□□ 0.87
ATL3-203ENST00000538786 NPATQ14207 1427 aa20.5■□□□□ 0.87
ATL3-203ENST00000538786 UGGT1Q9NYU2 1555 aa20.48■□□□□ 0.87
ATL3-203ENST00000538786 PRKRIP1Q9H875 184 aaPredicted RBP20.47■□□□□ 0.87
ATL3-203ENST00000538786 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.86
ATL3-203ENST00000538786 MYOM2P54296 1465 aa20.45■□□□□ 0.86
ATL3-203ENST00000538786 KIF13AQ9H1H9 1805 aa20.44■□□□□ 0.86
ATL3-203ENST00000538786 CAMSAP1Q5T5Y3 1602 aa20.44■□□□□ 0.86
ATL3-203ENST00000538786 KIF1BO60333 1816 aa20.43■□□□□ 0.86
ATL3-203ENST00000538786 ARHGAP31Q2M1Z3 1444 aa20.42■□□□□ 0.86
ATL3-203ENST00000538786 ZC3H13Q5T200 1668 aaKnown RBP20.42■□□□□ 0.86
ATL3-203ENST00000538786 ADGRB3O60242 1522 aa20.42■□□□□ 0.86
ATL3-203ENST00000538786 TSPOAP1O95153 1857 aa20.41■□□□□ 0.86
ATL3-203ENST00000538786 NOS1P29475 1434 aa20.41■□□□□ 0.86
ATL3-203ENST00000538786 TESK2Q96S53 571 aa20.41■□□□□ 0.86
ATL3-203ENST00000538786 COL17A1Q9UMD9 1497 aaPredicted RBP20.39■□□□□ 0.85
ATL3-203ENST00000538786 REREQ9P2R6 1566 aa20.39■□□□□ 0.85
ATL3-203ENST00000538786 KIAA1210Q9ULL0 1709 aa20.39■□□□□ 0.85
ATL3-203ENST00000538786 MROH2AA6NES4 1674 aa20.38■□□□□ 0.85
ATL3-203ENST00000538786 SCAF11Q99590 1463 aaKnown RBP20.37■□□□□ 0.85
ATL3-203ENST00000538786 IFT172Q9UG01 1749 aa20.37■□□□□ 0.85
ATL3-203ENST00000538786 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
ATL3-203ENST00000538786 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
ATL3-203ENST00000538786 TMF1P82094 1093 aa20.35■□□□□ 0.85
ATL3-203ENST00000538786 AGLP35573 1532 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 244.9 ms