RNA–Protein interactions for RNA: ENST00000538647.1

SMCO2-204, Transcript of single-pass membrane protein with coiled-coil domains 2, humanhuman

TSL 5

Gene SMCO2, Length 287 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2-204ENST00000538647 C6orf132Q5T0Z8 1188 aa19.46■□□□□ 0.71
SMCO2-204ENST00000538647 BARGINQ6ZT62 677 aa19.46■□□□□ 0.71
SMCO2-204ENST00000538647 NPDC1Q9NQX5 325 aaPredicted RBP19.43■□□□□ 0.7
SMCO2-204ENST00000538647 VARS2Q5ST30 1063 aaKnown RBP19.42■□□□□ 0.7
SMCO2-204ENST00000538647 BCL2L12Q9HB09 334 aa19.42■□□□□ 0.7
SMCO2-204ENST00000538647 HIC1Q14526 733 aa19.41■□□□□ 0.7
SMCO2-204ENST00000538647 LCE2DQ5TA82 110 aaPredicted RBP19.41■□□□□ 0.7
SMCO2-204ENST00000538647 GNPATO15228 680 aa19.39■□□□□ 0.69
SMCO2-204ENST00000538647 SLC24A3Q9HC58 644 aa19.39■□□□□ 0.69
SMCO2-204ENST00000538647 KRI1Q8N9T8 703 aaKnown RBP19.38■□□□□ 0.69
SMCO2-204ENST00000538647 FAM205CA6NFA0 338 aa19.36■□□□□ 0.69
SMCO2-204ENST00000538647 FECHP22830 423 aa19.36■□□□□ 0.69
SMCO2-204ENST00000538647 PTPREP23469 700 aa19.35■□□□□ 0.69
SMCO2-204ENST00000538647 CERKQ8TCT0 537 aa19.32■□□□□ 0.68
SMCO2-204ENST00000538647 COL9A1P20849 921 aa19.31■□□□□ 0.68
SMCO2-204ENST00000538647 KCNK17Q96T54 332 aa19.3■□□□□ 0.68
SMCO2-204ENST00000538647 MAP2K5Q13163 448 aa19.29■□□□□ 0.68
SMCO2-204ENST00000538647 PPP1R3GB7ZBB8 358 aa19.27■□□□□ 0.68
SMCO2-204ENST00000538647 HS3ST6Q96QI5 342 aa19.27■□□□□ 0.68
SMCO2-204ENST00000538647 MINK1Q8N4C8 1332 aaPredicted RBP19.26■□□□□ 0.67
SMCO2-204ENST00000538647 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
SMCO2-204ENST00000538647 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
SMCO2-204ENST00000538647 AK7Q96M32 723 aa19.25■□□□□ 0.67
SMCO2-204ENST00000538647 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
SMCO2-204ENST00000538647 KCNH8Q96L42 1107 aa19.24■□□□□ 0.67
SMCO2-204ENST00000538647 IRF6O14896 467 aa19.23■□□□□ 0.67
SMCO2-204ENST00000538647 PSEN2P49810 448 aa19.22■□□□□ 0.67
SMCO2-204ENST00000538647 PRSS12P56730 875 aa19.22■□□□□ 0.67
SMCO2-204ENST00000538647 POTEEQ6S8J3 1075 aa19.22■□□□□ 0.67
SMCO2-204ENST00000538647 ZNF687Q8N1G0 1237 aa19.22■□□□□ 0.67
SMCO2-204ENST00000538647 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
SMCO2-204ENST00000538647 CCDC102AQ96A19 550 aa19.21■□□□□ 0.67
SMCO2-204ENST00000538647 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
SMCO2-204ENST00000538647 RBM27Q9P2N5 1060 aaKnown RBP19.2■□□□□ 0.66
SMCO2-204ENST00000538647 ARHGAP33O14559 1287 aa19.19■□□□□ 0.66
SMCO2-204ENST00000538647 PBX2P40425 430 aa19.16■□□□□ 0.66
SMCO2-204ENST00000538647 TTC13Q8NBP0 860 aa19.16■□□□□ 0.66
SMCO2-204ENST00000538647 FAM161AQ3B820 660 aa19.14■□□□□ 0.65
SMCO2-204ENST00000538647 FAM198AQ9UFP1 575 aa19.14■□□□□ 0.65
SMCO2-204ENST00000538647 TRIM66O15016 1216 aa19.13■□□□□ 0.65
SMCO2-204ENST00000538647 PROX2Q3B8N5 592 aa19.13■□□□□ 0.65
SMCO2-204ENST00000538647 TSKSQ9UJT2 592 aa19.13■□□□□ 0.65
SMCO2-204ENST00000538647 DMRTA1Q5VZB9 504 aa19.12■□□□□ 0.65
SMCO2-204ENST00000538647 ZBED2Q9BTP6 218 aa19.11■□□□□ 0.65
SMCO2-204ENST00000538647 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
SMCO2-204ENST00000538647 ADGRG1Q9Y653 693 aa19.1■□□□□ 0.65
SMCO2-204ENST00000538647 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
SMCO2-204ENST00000538647 OATP04181 439 aa19.04■□□□□ 0.64
SMCO2-204ENST00000538647 PDE4DQ08499 809 aa19.03■□□□□ 0.64
SMCO2-204ENST00000538647 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
SMCO2-204ENST00000538647 METTL3Q86U44 580 aaKnown RBP19.03■□□□□ 0.64
SMCO2-204ENST00000538647 PACS2Q86VP3 889 aa19.03■□□□□ 0.64
SMCO2-204ENST00000538647 PHOX2BQ99453 314 aa19.02■□□□□ 0.64
SMCO2-204ENST00000538647 SLC4A5Q9BY07 1137 aa19.02■□□□□ 0.64
SMCO2-204ENST00000538647 C3orf80F5H4A9 247 aa19.01■□□□□ 0.63
SMCO2-204ENST00000538647 ONECUT3O60422 494 aaPredicted RBP19.01■□□□□ 0.63
SMCO2-204ENST00000538647 KIAA1468Q9P260 1216 aa19.01■□□□□ 0.63
SMCO2-204ENST00000538647 NBPF26B4DH59 902 aa19■□□□□ 0.63
SMCO2-204ENST00000538647 AMHR2Q16671 573 aa19■□□□□ 0.63
SMCO2-204ENST00000538647 PXYLP1Q8TE99 480 aa19■□□□□ 0.63
SMCO2-204ENST00000538647 NUDT18Q6ZVK8 323 aa18.99■□□□□ 0.63
SMCO2-204ENST00000538647 RBM46Q8TBY0 533 aaKnown RBP18.99■□□□□ 0.63
SMCO2-204ENST00000538647 PNMA3Q9UL41 463 aa18.99■□□□□ 0.63
SMCO2-204ENST00000538647 VPS9D1Q9Y2B5 631 aa18.99■□□□□ 0.63
SMCO2-204ENST00000538647 TATDN2Q93075 761 aa18.98■□□□□ 0.63
SMCO2-204ENST00000538647 LSM11P83369 360 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMCO2-204ENST00000538647 EYA1Q99502 592 aa18.96■□□□□ 0.63
SMCO2-204ENST00000538647 GPBP1L1Q9HC44 474 aaPredicted RBP18.96■□□□□ 0.63
SMCO2-204ENST00000538647 RABGEF1Q9UJ41 708 aa18.96■□□□□ 0.63
SMCO2-204ENST00000538647 SMAPO00193 183 aa18.95■□□□□ 0.62
SMCO2-204ENST00000538647 NLRP7Q8WX94 980 aa18.94■□□□□ 0.62
SMCO2-204ENST00000538647 TTLL12Q14166 644 aaPredicted RBP18.93■□□□□ 0.62
SMCO2-204ENST00000538647 POTEGQ6S5H5 508 aa18.93■□□□□ 0.62
SMCO2-204ENST00000538647 PARP9Q8IXQ6 854 aa18.92■□□□□ 0.62
SMCO2-204ENST00000538647 TK2O00142 265 aa18.91■□□□□ 0.62
SMCO2-204ENST00000538647 MDM2Q00987 491 aaPredicted RBP18.91■□□□□ 0.62
SMCO2-204ENST00000538647 POTEMA6NI47 508 aa18.89■□□□□ 0.61
SMCO2-204ENST00000538647 ADGRD1Q6QNK2 874 aa18.89■□□□□ 0.61
SMCO2-204ENST00000538647 SEPT9Q9UHD8 586 aaPredicted RBP18.89■□□□□ 0.61
SMCO2-204ENST00000538647 RCCD1A6NED2 376 aa18.88■□□□□ 0.61
SMCO2-204ENST00000538647 ANKRD13DQ6ZTN6 518 aa18.88■□□□□ 0.61
SMCO2-204ENST00000538647 KDM4CQ9H3R0 1056 aa18.88■□□□□ 0.61
SMCO2-204ENST00000538647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.86■□□□□ 0.61
SMCO2-204ENST00000538647 CLCN1P35523 988 aa18.86■□□□□ 0.61
SMCO2-204ENST00000538647 REPIN1Q9BWE0 567 aaKnown RBP18.86■□□□□ 0.61
SMCO2-204ENST00000538647 KRTAP3-3Q9BYR6 98 aa18.85■□□□□ 0.61
SMCO2-204ENST00000538647 KRTAP3-2Q9BYR7 98 aa18.85■□□□□ 0.61
SMCO2-204ENST00000538647 GPCPD1Q9NPB8 672 aa18.84■□□□□ 0.61
SMCO2-204ENST00000538647 DNAJB2P25686 324 aa18.83■□□□□ 0.6
SMCO2-204ENST00000538647 GIGYF2Q6Y7W6 1299 aaKnown RBP18.83■□□□□ 0.6
SMCO2-204ENST00000538647 TMUB1Q9BVT8 246 aa18.83■□□□□ 0.6
SMCO2-204ENST00000538647 NBPF3Q9H094 633 aa18.83■□□□□ 0.6
SMCO2-204ENST00000538647 BHMG1C9JSJ3 638 aaPredicted RBP18.82■□□□□ 0.6
SMCO2-204ENST00000538647 FAM98CQ17RN3 349 aaKnown RBP18.78■□□□□ 0.6
SMCO2-204ENST00000538647 CDAN1Q8IWY9 1227 aa18.78■□□□□ 0.6
SMCO2-204ENST00000538647 TMEM134Q9H6X4 195 aa18.78■□□□□ 0.6
SMCO2-204ENST00000538647 HRO43593 1189 aa18.77■□□□□ 0.6
SMCO2-204ENST00000538647 LAPTM4BQ86VI4 370 aa18.76■□□□□ 0.59
SMCO2-204ENST00000538647 MRPL50Q8N5N7 158 aaKnown RBP18.75■□□□□ 0.59
SMCO2-204ENST00000538647 DAXXQ9UER7 740 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms