RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 ATP7AQ04656 1500 aa19.92■□□□□ 0.78
ACTN1-205ENST00000538545 ERBINQ96RT1 1412 aa19.92■□□□□ 0.78
ACTN1-205ENST00000538545 CCDC144AA2RUR9 1427 aa19.89■□□□□ 0.77
ACTN1-205ENST00000538545 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
ACTN1-205ENST00000538545 IQGAP3Q86VI3 1631 aa19.88■□□□□ 0.77
ACTN1-205ENST00000538545 RTEL1-TNFRSF6BF6WH68 1400 aa19.88■□□□□ 0.77
ACTN1-205ENST00000538545 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
ACTN1-205ENST00000538545 POLR3GLQ9BT43 218 aa19.86■□□□□ 0.77
ACTN1-205ENST00000538545 KIDINS220Q9ULH0 1771 aa19.86■□□□□ 0.77
ACTN1-205ENST00000538545 CENPBP07199 599 aaPredicted RBP19.85■□□□□ 0.77
ACTN1-205ENST00000538545 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
ACTN1-205ENST00000538545 MAGI2Q86UL8 1455 aa19.84■□□□□ 0.77
ACTN1-205ENST00000538545 CNGB1Q14028 1251 aaPredicted RBP19.84■□□□□ 0.77
ACTN1-205ENST00000538545 GGT6Q6P531 493 aa19.83■□□□□ 0.76
ACTN1-205ENST00000538545 ZNF518AQ6AHZ1 1483 aa19.81■□□□□ 0.76
ACTN1-205ENST00000538545 DHX29Q7Z478 1369 aaKnown RBP19.81■□□□□ 0.76
ACTN1-205ENST00000538545 CARD11Q9BXL7 1154 aa19.81■□□□□ 0.76
ACTN1-205ENST00000538545 NBPF1Q3BBV0 1214 aa19.8■□□□□ 0.76
ACTN1-205ENST00000538545 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
ACTN1-205ENST00000538545 E9PCH4 1651 aa19.8■□□□□ 0.76
ACTN1-205ENST00000538545 SPATA31E1Q6ZUB1 1445 aa19.8■□□□□ 0.76
ACTN1-205ENST00000538545 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
ACTN1-205ENST00000538545 USP47Q96K76 1375 aa19.8■□□□□ 0.76
ACTN1-205ENST00000538545 TSPOAP1O95153 1857 aa19.79■□□□□ 0.76
ACTN1-205ENST00000538545 ANP32CO43423 234 aa19.78■□□□□ 0.76
ACTN1-205ENST00000538545 KIF7Q2M1P5 1343 aa19.77■□□□□ 0.76
ACTN1-205ENST00000538545 A2MP01023 1474 aa19.76■□□□□ 0.75
ACTN1-205ENST00000538545 CCDC7Q96M83 1385 aa19.76■□□□□ 0.75
ACTN1-205ENST00000538545 ATP10AO60312 1499 aa19.75■□□□□ 0.75
ACTN1-205ENST00000538545 MROH1Q8NDA8 1641 aa19.74■□□□□ 0.75
ACTN1-205ENST00000538545 ST20-MTHFSA0A0A6YYL1 179 aa19.74■□□□□ 0.75
ACTN1-205ENST00000538545 UGGT1Q9NYU2 1555 aa19.74■□□□□ 0.75
ACTN1-205ENST00000538545 BCORL1Q5H9F3 1711 aa19.74■□□□□ 0.75
ACTN1-205ENST00000538545 DEPDC5O75140 1603 aa19.73■□□□□ 0.75
ACTN1-205ENST00000538545 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
ACTN1-205ENST00000538545 ROCK2O75116 1388 aaKnown RBP19.73■□□□□ 0.75
ACTN1-205ENST00000538545 KANK1Q14678 1352 aa19.72■□□□□ 0.75
ACTN1-205ENST00000538545 GTF3C3Q9Y5Q9 886 aa19.72■□□□□ 0.75
ACTN1-205ENST00000538545 KDM5CP41229 1560 aa19.72■□□□□ 0.75
ACTN1-205ENST00000538545 FRMPD1Q5SYB0 1578 aa19.71■□□□□ 0.75
ACTN1-205ENST00000538545 YEATS2Q9ULM3 1422 aa19.71■□□□□ 0.75
ACTN1-205ENST00000538545 ABCA6Q8N139 1617 aa19.71■□□□□ 0.75
ACTN1-205ENST00000538545 RALGAPBQ86X10 1494 aa19.71■□□□□ 0.75
ACTN1-205ENST00000538545 MAP3K4Q9Y6R4 1608 aa19.7■□□□□ 0.74
ACTN1-205ENST00000538545 PRAG1Q86YV5 1406 aa19.7■□□□□ 0.74
ACTN1-205ENST00000538545 HECW2Q9P2P5 1572 aa19.7■□□□□ 0.74
ACTN1-205ENST00000538545 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
ACTN1-205ENST00000538545 CEP152O94986 1710 aa19.69■□□□□ 0.74
ACTN1-205ENST00000538545 NEO1Q92859 1461 aa19.68■□□□□ 0.74
ACTN1-205ENST00000538545 MLH3Q9UHC1 1453 aa19.68■□□□□ 0.74
ACTN1-205ENST00000538545 CLTCL1P53675 1640 aa19.67■□□□□ 0.74
ACTN1-205ENST00000538545 PRDM15P57071 1507 aaPredicted RBP19.67■□□□□ 0.74
ACTN1-205ENST00000538545 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
ACTN1-205ENST00000538545 TET3O43151 1660 aa19.66■□□□□ 0.74
ACTN1-205ENST00000538545 CHGAP10645 457 aaKnown RBP19.66■□□□□ 0.74
ACTN1-205ENST00000538545 CCDC184Q52MB2 194 aa19.66■□□□□ 0.74
ACTN1-205ENST00000538545 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
ACTN1-205ENST00000538545 VWDEQ8N2E2 1590 aa19.66■□□□□ 0.74
ACTN1-205ENST00000538545 DIP2BQ9P265 1576 aa19.66■□□□□ 0.74
ACTN1-205ENST00000538545 WASHC2CQ9Y4E1 1318 aa19.65■□□□□ 0.74
ACTN1-205ENST00000538545 CNTLNQ9NXG0 1405 aa19.64■□□□□ 0.73
ACTN1-205ENST00000538545 PPRC1Q5VV67 1664 aaKnown RBP19.64■□□□□ 0.73
ACTN1-205ENST00000538545 RICTORQ6R327 1708 aa19.64■□□□□ 0.73
ACTN1-205ENST00000538545 EIF2AK4Q9P2K8 1649 aaKnown RBP19.64■□□□□ 0.73
ACTN1-205ENST00000538545 PTPRTO14522 1441 aa19.63■□□□□ 0.73
ACTN1-205ENST00000538545 TRPM2O94759 1503 aa19.63■□□□□ 0.73
ACTN1-205ENST00000538545 TRPM1Q7Z4N2 1603 aa19.63■□□□□ 0.73
ACTN1-205ENST00000538545 DIP2CQ9Y2E4 1556 aa19.61■□□□□ 0.73
ACTN1-205ENST00000538545 NPATQ14207 1427 aa19.59■□□□□ 0.73
ACTN1-205ENST00000538545 NUTM2DQ5VT03 806 aaPredicted RBP19.59■□□□□ 0.73
ACTN1-205ENST00000538545 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
ACTN1-205ENST00000538545 GLI2P10070 1586 aa19.58■□□□□ 0.73
ACTN1-205ENST00000538545 MLECQ14165 292 aa19.57■□□□□ 0.72
ACTN1-205ENST00000538545 ADGRF5Q8IZF2 1346 aa19.56■□□□□ 0.72
ACTN1-205ENST00000538545 CCER2I3L3R5 266 aa19.56■□□□□ 0.72
ACTN1-205ENST00000538545 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
ACTN1-205ENST00000538545 RNF17Q9BXT8 1623 aaKnown RBP19.56■□□□□ 0.72
ACTN1-205ENST00000538545 POLR1AO95602 1720 aaPredicted RBP19.56■□□□□ 0.72
ACTN1-205ENST00000538545 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
ACTN1-205ENST00000538545 CFAP70Q5T0N1 1121 aa19.54■□□□□ 0.72
ACTN1-205ENST00000538545 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
ACTN1-205ENST00000538545 ABCC3O15438 1527 aa19.52■□□□□ 0.72
ACTN1-205ENST00000538545 KIF13AQ9H1H9 1805 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 MADDQ8WXG6 1647 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 DISP3Q9P2K9 1392 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 SENP3-EIF4A1A0A087X0R7 540 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 TESK2Q96S53 571 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 SIGLEC1Q9BZZ2 1709 aa19.51■□□□□ 0.71
ACTN1-205ENST00000538545 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
ACTN1-205ENST00000538545 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
ACTN1-205ENST00000538545 LMTK2Q8IWU2 1503 aa19.49■□□□□ 0.71
ACTN1-205ENST00000538545 KIF1BO60333 1816 aa19.48■□□□□ 0.71
ACTN1-205ENST00000538545 FAM9BQ8IZU0 186 aa19.48■□□□□ 0.71
ACTN1-205ENST00000538545 NOS1P29475 1434 aa19.46■□□□□ 0.71
ACTN1-205ENST00000538545 MRS2Q9HD23 443 aa19.46■□□□□ 0.71
ACTN1-205ENST00000538545 CAMSAP1Q5T5Y3 1602 aa19.46■□□□□ 0.71
ACTN1-205ENST00000538545 IDI1Q13907 227 aa19.44■□□□□ 0.7
ACTN1-205ENST00000538545 TMEM132EQ6IEE7 984 aa19.43■□□□□ 0.7
ACTN1-205ENST00000538545 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.73e-7■■□□□ 13
ACTN1-205ENST00000538545 SYNMO15061 1565 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms