RNA–Protein interactions for RNA: ENST00000538501.5

PPME1-204, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 744 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-204ENST00000538501 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
PPME1-204ENST00000538501 DDX12PQ92771 950 aa12.19□□□□□ -0.46
PPME1-204ENST00000538501 JPH4Q96JJ6 628 aa12.19□□□□□ -0.46
PPME1-204ENST00000538501 GPR153Q6NV75 609 aa12.18□□□□□ -0.46
PPME1-204ENST00000538501 FBXW7Q969H0 707 aa12.18□□□□□ -0.46
PPME1-204ENST00000538501 ZMYND10O75800 440 aa12.17□□□□□ -0.46
PPME1-204ENST00000538501 PSDA5PKW4 1024 aaPredicted RBP12.16□□□□□ -0.46
PPME1-204ENST00000538501 ERCC6Q03468 1493 aa12.14□□□□□ -0.47
PPME1-204ENST00000538501 TYW1BQ6NUM6 668 aa12.14□□□□□ -0.47
PPME1-204ENST00000538501 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
PPME1-204ENST00000538501 ARSIQ5FYB1 569 aa12.13□□□□□ -0.47
PPME1-204ENST00000538501 HOXB1P14653 301 aaPredicted RBP12.12□□□□□ -0.47
PPME1-204ENST00000538501 FOSBP53539 338 aa12.12□□□□□ -0.47
PPME1-204ENST00000538501 EN1Q05925 392 aaPredicted RBP12.12□□□□□ -0.47
PPME1-204ENST00000538501 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
PPME1-204ENST00000538501 NUDT7P0C024 238 aa12.11□□□□□ -0.47
PPME1-204ENST00000538501 BARGINQ6ZT62 677 aa12.11□□□□□ -0.47
PPME1-204ENST00000538501 CEP164Q9UPV0 1460 aa12.09□□□□□ -0.47
PPME1-204ENST00000538501 GPR37O15354 613 aa12.09□□□□□ -0.47
PPME1-204ENST00000538501 FCHSD2O94868 740 aa12.09□□□□□ -0.47
PPME1-204ENST00000538501 NUTM2FA1L443 756 aa12.08□□□□□ -0.48
PPME1-204ENST00000538501 HIC1Q14526 733 aa12.08□□□□□ -0.48
PPME1-204ENST00000538501 ZDHHC16Q969W1 377 aa12.07□□□□□ -0.48
PPME1-204ENST00000538501 MAP3K7O43318 606 aa12.06□□□□□ -0.48
PPME1-204ENST00000538501 ZNF454Q8N9F8 522 aa12.06□□□□□ -0.48
PPME1-204ENST00000538501 CERKQ8TCT0 537 aa12.06□□□□□ -0.48
PPME1-204ENST00000538501 PTGDRQ13258 359 aa12.05□□□□□ -0.48
PPME1-204ENST00000538501 GNPATO15228 680 aa12.04□□□□□ -0.48
PPME1-204ENST00000538501 PPP4R3BQ5MIZ7 849 aa12.04□□□□□ -0.48
PPME1-204ENST00000538501 KHSRPQ92945 711 aaKnown RBP eCLIP12.04□□□□□ -0.48
PPME1-204ENST00000538501 PRIM1P49642 420 aaKnown RBP12.03□□□□□ -0.48
PPME1-204ENST00000538501 LHX6Q9UPM6 363 aa12.02□□□□□ -0.49
PPME1-204ENST00000538501 PRDM2Q13029 1718 aa12.02□□□□□ -0.49
PPME1-204ENST00000538501 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
PPME1-204ENST00000538501 MRC2Q9UBG0 1479 aa12.02□□□□□ -0.49
PPME1-204ENST00000538501 MAP2K5Q13163 448 aa12.01□□□□□ -0.49
PPME1-204ENST00000538501 ABCC8Q09428 1581 aa12.01□□□□□ -0.49
PPME1-204ENST00000538501 AK7Q96M32 723 aa12□□□□□ -0.49
PPME1-204ENST00000538501 MINK1Q8N4C8 1332 aaPredicted RBP12□□□□□ -0.49
PPME1-204ENST00000538501 KRI1Q8N9T8 703 aaKnown RBP11.99□□□□□ -0.49
PPME1-204ENST00000538501 RBM27Q9P2N5 1060 aaKnown RBP11.99□□□□□ -0.49
PPME1-204ENST00000538501 KIF21AQ7Z4S6 1674 aa11.99□□□□□ -0.49
PPME1-204ENST00000538501 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
PPME1-204ENST00000538501 RBM33Q96EV2 1170 aaKnown RBP11.98□□□□□ -0.49
PPME1-204ENST00000538501 BCL2L12Q9HB09 334 aa11.98□□□□□ -0.49
PPME1-204ENST00000538501 SLC24A3Q9HC58 644 aa11.98□□□□□ -0.49
PPME1-204ENST00000538501 NPDC1Q9NQX5 325 aaPredicted RBP11.97□□□□□ -0.49
PPME1-204ENST00000538501 TSR1Q2NL82 804 aaKnown RBP11.96□□□□□ -0.49
PPME1-204ENST00000538501 ADAM33Q9BZ11 813 aa11.96□□□□□ -0.49
PPME1-204ENST00000538501 URB2Q14146 1524 aaKnown RBP11.96□□□□□ -0.5
PPME1-204ENST00000538501 CDHR5Q9HBB8 845 aa11.95□□□□□ -0.5
PPME1-204ENST00000538501 TOPBP1Q92547 1522 aa11.95□□□□□ -0.5
PPME1-204ENST00000538501 DNMBPQ6XZF7 1577 aa11.93□□□□□ -0.5
PPME1-204ENST00000538501 CUX1P39880 1505 aa11.93□□□□□ -0.5
PPME1-204ENST00000538501 IRF6O14896 467 aa11.93□□□□□ -0.5
PPME1-204ENST00000538501 PTPREP23469 700 aa11.93□□□□□ -0.5
PPME1-204ENST00000538501 WDR62O43379 1518 aa11.91□□□□□ -0.5
PPME1-204ENST00000538501 ST18O60284 1047 aa11.91□□□□□ -0.5
PPME1-204ENST00000538501 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
PPME1-204ENST00000538501 PPP1R3GB7ZBB8 358 aa11.9□□□□□ -0.5
PPME1-204ENST00000538501 THOC2Q8NI27 1593 aaKnown RBP11.89□□□□□ -0.51
PPME1-204ENST00000538501 SOGA1O94964 1423 aa11.89□□□□□ -0.51
PPME1-204ENST00000538501 TOP2BQ02880 1626 aa11.89□□□□□ -0.51
PPME1-204ENST00000538501 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
PPME1-204ENST00000538501 CCDC102AQ96A19 550 aa11.88□□□□□ -0.51
PPME1-204ENST00000538501 FGD5Q6ZNL6 1462 aa11.88□□□□□ -0.51
PPME1-204ENST00000538501 ERBB3P21860 1342 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 TRIM66O15016 1216 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 PBX2P40425 430 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 EMP3P54852 163 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 TTC13Q8NBP0 860 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 CUX2O14529 1486 aa11.87□□□□□ -0.51
PPME1-204ENST00000538501 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
PPME1-204ENST00000538501 PRSS12P56730 875 aa11.86□□□□□ -0.51
PPME1-204ENST00000538501 AMHR2Q16671 573 aa11.86□□□□□ -0.51
PPME1-204ENST00000538501 DAXXQ9UER7 740 aaPredicted RBP11.86□□□□□ -0.51
PPME1-204ENST00000538501 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
PPME1-204ENST00000538501 FECHP22830 423 aa11.85□□□□□ -0.51
PPME1-204ENST00000538501 BIVM-ERCC5R4GMW8 1640 aa11.85□□□□□ -0.51
PPME1-204ENST00000538501 IFT140Q96RY7 1462 aa11.84□□□□□ -0.51
PPME1-204ENST00000538501 ONECUT3O60422 494 aaPredicted RBP11.84□□□□□ -0.51
PPME1-204ENST00000538501 OATP04181 439 aa11.84□□□□□ -0.51
PPME1-204ENST00000538501 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
PPME1-204ENST00000538501 CDCA7LQ96GN5 454 aa11.83□□□□□ -0.52
PPME1-204ENST00000538501 RAD54L2Q9Y4B4 1467 aa11.83□□□□□ -0.52
PPME1-204ENST00000538501 NEUROD2Q15784 382 aa11.82□□□□□ -0.52
PPME1-204ENST00000538501 PADI6Q6TGC4 694 aa11.82□□□□□ -0.52
PPME1-204ENST00000538501 PDE4DQ08499 809 aa11.81□□□□□ -0.52
PPME1-204ENST00000538501 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
PPME1-204ENST00000538501 COL9A1P20849 921 aa11.8□□□□□ -0.52
PPME1-204ENST00000538501 ZNF687Q8N1G0 1237 aa11.8□□□□□ -0.52
PPME1-204ENST00000538501 SLC4A5Q9BY07 1137 aa11.8□□□□□ -0.52
PPME1-204ENST00000538501 FAM163AQ96GL9 167 aaPredicted RBP11.79□□□□□ -0.52
PPME1-204ENST00000538501 KCNK17Q96T54 332 aa11.79□□□□□ -0.52
PPME1-204ENST00000538501 ADGRG1Q9Y653 693 aa11.79□□□□□ -0.52
PPME1-204ENST00000538501 TDRD9Q8NDG6 1382 aaKnown RBP11.79□□□□□ -0.52
PPME1-204ENST00000538501 KIF27Q86VH2 1401 aa11.77□□□□□ -0.52
PPME1-204ENST00000538501 ABCA10Q8WWZ4 1543 aa11.77□□□□□ -0.52
PPME1-204ENST00000538501 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.53
PPME1-204ENST00000538501 METTL3Q86U44 580 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms