RNA–Protein interactions for RNA: ENST00000537320.5

TNC-211, Transcript of tenascin C, humanhuman

TSL 5 BASIC

Gene TNC, Length 4,946 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-211ENST00000537320 MINK1Q8N4C8 1332 aaPredicted RBP14.52□□□□□ -0.08
TNC-211ENST00000537320 ITPRIPQ8IWB1 547 aa14.51□□□□□ -0.09
TNC-211ENST00000537320 NOP58Q9Y2X3 529 aaKnown RBP14.51□□□□□ -0.09
TNC-211ENST00000537320 ABCA10Q8WWZ4 1543 aa14.5□□□□□ -0.09
TNC-211ENST00000537320 RRP7AQ9Y3A4 280 aaKnown RBP14.5□□□□□ -0.09
TNC-211ENST00000537320 SMC4Q9NTJ3 1288 aa14.5□□□□□ -0.09
TNC-211ENST00000537320 CGNL1Q0VF96 1302 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 EHBP1L1Q8N3D4 1523 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 AMPHP49418 695 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 APBB1O00213 710 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 TIAM1Q13009 1591 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 CHMP4AQ9BY43 222 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 KIF7Q2M1P5 1343 aa14.49□□□□□ -0.09
TNC-211ENST00000537320 CLUAP1Q96AJ1 413 aa14.48□□□□□ -0.09
TNC-211ENST00000537320 TROQ12816 1431 aaPredicted RBP14.48□□□□□ -0.09
TNC-211ENST00000537320 NPHP1O15259 732 aa14.48□□□□□ -0.09
TNC-211ENST00000537320 RBM19Q9Y4C8 960 aaKnown RBP14.48□□□□□ -0.09
TNC-211ENST00000537320 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
TNC-211ENST00000537320 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
TNC-211ENST00000537320 CFAP44Q96MT7 982 aa14.47□□□□□ -0.09
TNC-211ENST00000537320 RWDD1Q9H446 243 aaPredicted RBP14.47□□□□□ -0.09
TNC-211ENST00000537320 CENPJQ9HC77 1338 aaPredicted RBP14.47□□□□□ -0.09
TNC-211ENST00000537320 MIA2Q96PC5 1412 aa14.47□□□□□ -0.09
TNC-211ENST00000537320 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
TNC-211ENST00000537320 HSP90AB1P08238 724 aaKnown RBP14.46□□□□□ -0.09
TNC-211ENST00000537320 KCNJ4P48050 445 aa14.46□□□□□ -0.09
TNC-211ENST00000537320 STAC3Q96MF2 364 aa14.46□□□□□ -0.1
TNC-211ENST00000537320 TPRNQ4KMQ1 711 aa14.45□□□□□ -0.1
TNC-211ENST00000537320 KIAA0586Q9BVV6 1533 aa14.45□□□□□ -0.1
TNC-211ENST00000537320 STK31Q9BXU1 1019 aa14.44□□□□□ -0.1
TNC-211ENST00000537320 COG3Q96JB2 828 aa14.44□□□□□ -0.1
TNC-211ENST00000537320 HECW1Q76N89 1606 aa14.44□□□□□ -0.1
TNC-211ENST00000537320 C9orf84Q5VXU9 1444 aa14.44□□□□□ -0.1
TNC-211ENST00000537320 LMOD3Q0VAK6 560 aa14.43□□□□□ -0.1
TNC-211ENST00000537320 ZBED9Q6R2W3 1325 aa14.43□□□□□ -0.1
TNC-211ENST00000537320 PEG3Q9GZU2 1588 aa14.43□□□□□ -0.1
TNC-211ENST00000537320 HFM1A2PYH4 1435 aa14.42□□□□□ -0.1
TNC-211ENST00000537320 TCERG1O14776 1098 aaKnown RBP14.42□□□□□ -0.1
TNC-211ENST00000537320 FGD1P98174 961 aa14.42□□□□□ -0.1
TNC-211ENST00000537320 TMEM132EQ6IEE7 984 aa14.41□□□□□ -0.1
TNC-211ENST00000537320 WASHC2AQ641Q2 1341 aa14.41□□□□□ -0.1
TNC-211ENST00000537320 APAF1O14727 1248 aa14.41□□□□□ -0.1
TNC-211ENST00000537320 CDK13Q14004 1512 aaKnown RBP14.41□□□□□ -0.1
TNC-211ENST00000537320 PMFBP1Q8TBY8 1022 aa14.41□□□□□ -0.1
TNC-211ENST00000537320 HSCBQ8IWL3 235 aa14.41□□□□□ -0.1
TNC-211ENST00000537320 ZNF330Q9Y3S2 320 aaPredicted RBP14.41□□□□□ -0.1
TNC-211ENST00000537320 EPRSP07814 1512 aaKnown RBP14.4□□□□□ -0.1
TNC-211ENST00000537320 CFAP70Q5T0N1 1121 aa14.39□□□□□ -0.11
TNC-211ENST00000537320 BCL2L13Q9BXK5 485 aa14.39□□□□□ -0.11
TNC-211ENST00000537320 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.39□□□□□ -0.11
TNC-211ENST00000537320 SCAPERQ9BY12 1400 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 PLIN1O60240 522 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 SLC4A10Q6U841 1118 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 IQGAP2Q13576 1575 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 CNTLNQ9NXG0 1405 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
TNC-211ENST00000537320 DAPK1P53355 1430 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 SPRYD3Q8NCJ5 442 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
TNC-211ENST00000537320 TAOK2Q9UL54 1235 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 E9PSI1 815 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 KIAA1107Q9UPP5 1409 aa14.38□□□□□ -0.11
TNC-211ENST00000537320 UNC13AQ9UPW8 1703 aa14.37□□□□□ -0.11
TNC-211ENST00000537320 NBPF1Q3BBV0 1214 aa14.37□□□□□ -0.11
TNC-211ENST00000537320 NBPF8Q3BBV2 869 aa14.37□□□□□ -0.11
TNC-211ENST00000537320 PLEKHH2Q8IVE3 1493 aa14.37□□□□□ -0.11
TNC-211ENST00000537320 MCCP23508 829 aa14.37□□□□□ -0.11
TNC-211ENST00000537320 SUPT6HQ7KZ85 1726 aaKnown RBP14.36□□□□□ -0.11
TNC-211ENST00000537320 ZRSR1Q15695 479 aaKnown RBP14.36□□□□□ -0.11
TNC-211ENST00000537320 CDK11BP21127 795 aaKnown RBP14.36□□□□□ -0.11
TNC-211ENST00000537320 NAP1L2Q9ULW6 460 aaPredicted RBP14.36□□□□□ -0.11
TNC-211ENST00000537320 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
TNC-211ENST00000537320 PCF11O94913 1555 aaKnown RBP14.35□□□□□ -0.11
TNC-211ENST00000537320 DIAPH1O60610 1272 aaKnown RBP14.35□□□□□ -0.11
TNC-211ENST00000537320 CABP2Q9NPB3 220 aa14.35□□□□□ -0.11
TNC-211ENST00000537320 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
TNC-211ENST00000537320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.34□□□□□ -0.11
TNC-211ENST00000537320 RRP1P56182 461 aaKnown RBP14.34□□□□□ -0.11
TNC-211ENST00000537320 CUL7Q14999 1698 aa14.34□□□□□ -0.11
TNC-211ENST00000537320 HDAC5Q9UQL6 1122 aa14.33□□□□□ -0.11
TNC-211ENST00000537320 EXOC6Q8TAG9 804 aa14.33□□□□□ -0.12
TNC-211ENST00000537320 HMMRO75330 724 aa14.33□□□□□ -0.12
TNC-211ENST00000537320 RAPGEF3O95398 923 aa14.32□□□□□ -0.12
TNC-211ENST00000537320 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
TNC-211ENST00000537320 CCDC9Q9Y3X0 531 aaKnown RBP14.32□□□□□ -0.12
TNC-211ENST00000537320 NAIPQ13075 1403 aa14.32□□□□□ -0.12
TNC-211ENST00000537320 PLB1Q6P1J6 1458 aa14.32□□□□□ -0.12
TNC-211ENST00000537320 GRIN2AQ12879 1464 aa14.31□□□□□ -0.12
TNC-211ENST00000537320 KIAA1211Q6ZU35 1233 aa14.31□□□□□ -0.12
TNC-211ENST00000537320 ZKSCAN2Q63HK3 967 aa14.3□□□□□ -0.12
TNC-211ENST00000537320 CRBNQ96SW2 442 aa14.3□□□□□ -0.12
TNC-211ENST00000537320 ARHGEF11O15085 1522 aa14.3□□□□□ -0.12
TNC-211ENST00000537320 MFAP1P55081 439 aaKnown RBP14.3□□□□□ -0.12
TNC-211ENST00000537320 PTMAP06454 111 aaKnown RBP14.3□□□□□ -0.12
TNC-211ENST00000537320 RIPK4P57078 832 aa14.3□□□□□ -0.12
TNC-211ENST00000537320 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
TNC-211ENST00000537320 RUNDC1Q96C34 613 aa14.29□□□□□ -0.12
TNC-211ENST00000537320 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
TNC-211ENST00000537320 MAGI1Q96QZ7 1491 aaPredicted RBP14.28□□□□□ -0.12
TNC-211ENST00000537320 ZNF608Q9ULD9 1512 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms