RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PTPN5P54829 565 aa15.41■□□□□ 0.06
CCDC7-208ENST00000537047 PROX2Q3B8N5 592 aa15.41■□□□□ 0.06
CCDC7-208ENST00000537047 FBXW7Q969H0 707 aa15.41■□□□□ 0.06
CCDC7-208ENST00000537047 MRPL50Q8N5N7 158 aaKnown RBP15.4■□□□□ 0.06
CCDC7-208ENST00000537047 E2F4Q16254 413 aa15.38■□□□□ 0.05
CCDC7-208ENST00000537047 THSD4Q6ZMP0 1018 aa15.38■□□□□ 0.05
CCDC7-208ENST00000537047 RBM33Q96EV2 1170 aaKnown RBP15.38■□□□□ 0.05
CCDC7-208ENST00000537047 WNT2BQ93097 391 aa15.36■□□□□ 0.05
CCDC7-208ENST00000537047 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
CCDC7-208ENST00000537047 GOLGA8CPA6NN73 597 aa15.35■□□□□ 0.05
CCDC7-208ENST00000537047 EPAS1Q99814 870 aa15.35■□□□□ 0.05
CCDC7-208ENST00000537047 PDIA6Q15084 440 aa15.34■□□□□ 0.05
CCDC7-208ENST00000537047 C6orf132Q5T0Z8 1188 aa15.34■□□□□ 0.05
CCDC7-208ENST00000537047 RABGEF1Q9UJ41 708 aa15.34■□□□□ 0.05
CCDC7-208ENST00000537047 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
CCDC7-208ENST00000537047 WDR70Q9NW82 654 aa15.33■□□□□ 0.04
CCDC7-208ENST00000537047 NBR1Q14596 966 aa15.3■□□□□ 0.04
CCDC7-208ENST00000537047 PRIM1P49642 420 aaKnown RBP15.28■□□□□ 0.04
CCDC7-208ENST00000537047 TSR1Q2NL82 804 aaKnown RBP15.28■□□□□ 0.04
CCDC7-208ENST00000537047 KIAA1468Q9P260 1216 aa15.26■□□□□ 0.03
CCDC7-208ENST00000537047 SPDYE16A6NNV3 312 aaPredicted RBP15.25■□□□□ 0.03
CCDC7-208ENST00000537047 EN1Q05925 392 aaPredicted RBP15.24■□□□□ 0.03
CCDC7-208ENST00000537047 GRXCR2A6NFK2 248 aa15.23■□□□□ 0.03
CCDC7-208ENST00000537047 MAP3K7O43318 606 aa15.23■□□□□ 0.03
CCDC7-208ENST00000537047 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
CCDC7-208ENST00000537047 ARIH1Q9Y4X5 557 aaPredicted RBP15.23■□□□□ 0.03
CCDC7-208ENST00000537047 SEPT9Q9UHD8 586 aaPredicted RBP15.21■□□□□ 0.03
CCDC7-208ENST00000537047 TRIM6-TRIM34B2RNG4 842 aa15.2■□□□□ 0.02
CCDC7-208ENST00000537047 LAPTM4BQ86VI4 370 aa15.2■□□□□ 0.02
CCDC7-208ENST00000537047 ANKK1Q8NFD2 765 aa15.19■□□□□ 0.02
CCDC7-208ENST00000537047 BCAMP50895 628 aa15.17■□□□□ 0.02
CCDC7-208ENST00000537047 IFFO2Q5TF58 517 aa15.17■□□□□ 0.02
CCDC7-208ENST00000537047 ZFRQ96KR1 1074 aaKnown RBP15.17■□□□□ 0.02
CCDC7-208ENST00000537047 TSKSQ9UJT2 592 aa15.15■□□□□ 0.02
CCDC7-208ENST00000537047 SOWAHBA6NEL2 793 aa15.14■□□□□ 0.01
CCDC7-208ENST00000537047 OSBPP22059 807 aa15.14■□□□□ 0.01
CCDC7-208ENST00000537047 CDHR5Q9HBB8 845 aa15.12■□□□□ 0.01
CCDC7-208ENST00000537047 FAM198AQ9UFP1 575 aa15.11■□□□□ 0.01
CCDC7-208ENST00000537047 KCNV2Q8TDN2 545 aa15.1■□□□□ 0.01
CCDC7-208ENST00000537047 C3orf80F5H4A9 247 aa15.09■□□□□ 0.01
CCDC7-208ENST00000537047 FAM98CQ17RN3 349 aaKnown RBP15.09■□□□□ 0.01
CCDC7-208ENST00000537047 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
CCDC7-208ENST00000537047 WBP1LQ9NX94 342 aa15.07■□□□□ 0
CCDC7-208ENST00000537047 SMAPO00193 183 aa15.06■□□□□ 0
CCDC7-208ENST00000537047 A0A0G2JS52 829 aa15.04■□□□□ -0
CCDC7-208ENST00000537047 MLLT3P42568 568 aaPredicted RBP15.04■□□□□ -0
CCDC7-208ENST00000537047 PRSS12P56730 875 aa15.04■□□□□ -0
CCDC7-208ENST00000537047 PACS2Q86VP3 889 aa15.04■□□□□ -0
CCDC7-208ENST00000537047 ITGBL1O95965 494 aaPredicted RBP15.02■□□□□ -0
CCDC7-208ENST00000537047 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.01□□□□□ -0.01
CCDC7-208ENST00000537047 NYAP1Q6ZVC0 841 aa15□□□□□ -0.01
CCDC7-208ENST00000537047 CERKQ8TCT0 537 aa14.99□□□□□ -0.01
CCDC7-208ENST00000537047 ARHGEF1Q92888 912 aaKnown RBP14.99□□□□□ -0.01
CCDC7-208ENST00000537047 LRCH3Q96II8 777 aa14.99□□□□□ -0.01
CCDC7-208ENST00000537047 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
CCDC7-208ENST00000537047 NPDC1Q9NQX5 325 aaPredicted RBP14.98□□□□□ -0.01
CCDC7-208ENST00000537047 TSR3Q9UJK0 312 aaKnown RBP14.98□□□□□ -0.01
CCDC7-208ENST00000537047 RGS20O76081 388 aa14.96□□□□□ -0.01
CCDC7-208ENST00000537047 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
CCDC7-208ENST00000537047 TATDN2Q93075 761 aa14.94□□□□□ -0.02
CCDC7-208ENST00000537047 PNMA3Q9UL41 463 aa14.94□□□□□ -0.02
CCDC7-208ENST00000537047 NUDT18Q6ZVK8 323 aa14.92□□□□□ -0.02
CCDC7-208ENST00000537047 SAMD7Q7Z3H4 446 aa14.92□□□□□ -0.02
CCDC7-208ENST00000537047 PADI6Q6TGC4 694 aa14.9□□□□□ -0.02
CCDC7-208ENST00000537047 NBPF26B4DH59 902 aa14.88□□□□□ -0.03
CCDC7-208ENST00000537047 KCNC4Q03721 635 aa14.88□□□□□ -0.03
CCDC7-208ENST00000537047 RBM27Q9P2N5 1060 aaKnown RBP14.88□□□□□ -0.03
CCDC7-208ENST00000537047 PPP4CP60510 307 aa14.87□□□□□ -0.03
CCDC7-208ENST00000537047 TTC13Q8NBP0 860 aa14.87□□□□□ -0.03
CCDC7-208ENST00000537047 SEMA3EO15041 775 aa14.86□□□□□ -0.03
CCDC7-208ENST00000537047 P3H3Q8IVL6 736 aa14.79□□□□□ -0.04
CCDC7-208ENST00000537047 IRX2Q9BZI1 471 aaPredicted RBP14.79□□□□□ -0.04
CCDC7-208ENST00000537047 RNF40O75150 1001 aa14.78□□□□□ -0.04
CCDC7-208ENST00000537047 PTGDRQ13258 359 aa14.78□□□□□ -0.04
CCDC7-208ENST00000537047 TJAP1Q5JTD0 557 aa14.78□□□□□ -0.04
CCDC7-208ENST00000537047 NUTM2FA1L443 756 aa14.76□□□□□ -0.05
CCDC7-208ENST00000537047 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
CCDC7-208ENST00000537047 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
CCDC7-208ENST00000537047 SWT1Q5T5J6 900 aaKnown RBP14.75□□□□□ -0.05
CCDC7-208ENST00000537047 EYA1Q99502 592 aa14.75□□□□□ -0.05
CCDC7-208ENST00000537047 HDGFP51858 240 aaKnown RBP14.72□□□□□ -0.05
CCDC7-208ENST00000537047 MTRQ99707 1265 aa14.72□□□□□ -0.05
CCDC7-208ENST00000537047 APLP1P51693 650 aa14.71□□□□□ -0.05
CCDC7-208ENST00000537047 KDM2AQ9Y2K7 1162 aa14.7□□□□□ -0.06
CCDC7-208ENST00000537047 IL21Q9HBE4 155 aa14.68□□□□□ -0.06
CCDC7-208ENST00000537047 RBM26Q5T8P6 1007 aaKnown RBP14.67□□□□□ -0.06
CCDC7-208ENST00000537047 TESPA1A2RU30 521 aaPredicted RBP14.66□□□□□ -0.06
CCDC7-208ENST00000537047 ZNF516Q92618 1163 aa14.66□□□□□ -0.06
CCDC7-208ENST00000537047 ADGRG1Q9Y653 693 aa14.66□□□□□ -0.06
CCDC7-208ENST00000537047 SLF2Q8IX21 1173 aa14.64□□□□□ -0.07
CCDC7-208ENST00000537047 FCHSD2O94868 740 aa14.62□□□□□ -0.07
CCDC7-208ENST00000537047 PPP1R18Q6NYC8 613 aa14.59□□□□□ -0.07
CCDC7-208ENST00000537047 NECTIN2Q92692 538 aa14.59□□□□□ -0.07
CCDC7-208ENST00000537047 RCCD1A6NED2 376 aa14.58□□□□□ -0.08
CCDC7-208ENST00000537047 FECHP22830 423 aa14.58□□□□□ -0.08
CCDC7-208ENST00000537047 DNAJB2P25686 324 aa14.58□□□□□ -0.08
CCDC7-208ENST00000537047 COPS2P61201 443 aa14.58□□□□□ -0.08
CCDC7-208ENST00000537047 NKX2-3Q8TAU0 364 aa14.58□□□□□ -0.08
CCDC7-208ENST00000537047 RBM46Q8TBY0 533 aaKnown RBP14.58□□□□□ -0.08
CCDC7-208ENST00000537047 TMEM134Q9H6X4 195 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms