RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ADAMTS12P58397 1594 aa9.16□□□□□ -0.94
CPSF7-215ENST00000536145 CAMSAP2Q08AD1 1489 aa9.15□□□□□ -0.94
CPSF7-215ENST00000536145 PTPRGP23470 1445 aa9.15□□□□□ -0.94
CPSF7-215ENST00000536145 LAMC1P11047 1609 aa9.15□□□□□ -0.94
CPSF7-215ENST00000536145 ADCY10Q96PN6 1610 aa9.15□□□□□ -0.94
CPSF7-215ENST00000536145 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
CPSF7-215ENST00000536145 ZNF644Q9H582 1327 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-215ENST00000536145 PER1O15534 1290 aaPredicted RBP9.14□□□□□ -0.95
CPSF7-215ENST00000536145 NLRP13Q86W25 1043 aa9.14□□□□□ -0.95
CPSF7-215ENST00000536145 FAM43AQ8N2R8 423 aa9.14□□□□□ -0.95
CPSF7-215ENST00000536145 KIAA0586Q9BVV6 1533 aa9.14□□□□□ -0.95
CPSF7-215ENST00000536145 MRC2Q9UBG0 1479 aa9.14□□□□□ -0.95
CPSF7-215ENST00000536145 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 C8orf34Q49A92 452 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 CDCA7LQ96GN5 454 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 CLASP1Q7Z460 1538 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 ITSN2Q9NZM3 1697 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
CPSF7-215ENST00000536145 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 DISP1Q96F81 1524 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 GPATCH8Q9UKJ3 1502 aaKnown RBP9.12□□□□□ -0.95
CPSF7-215ENST00000536145 SENP3-EIF4A1A0A087X0R7 540 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 SKAP1Q86WV1 359 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 SHANK2Q9UPX8 1470 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 TROQ12816 1431 aaPredicted RBP9.12□□□□□ -0.95
CPSF7-215ENST00000536145 TRPM1Q7Z4N2 1603 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 RAPGEF6Q8TEU7 1601 aa9.12□□□□□ -0.95
CPSF7-215ENST00000536145 COL17A1Q9UMD9 1497 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-215ENST00000536145 PKD2Q13563 968 aa9.11□□□□□ -0.95
CPSF7-215ENST00000536145 FAM161AQ3B820 660 aa9.11□□□□□ -0.95
CPSF7-215ENST00000536145 CENPQQ7L2Z9 268 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-215ENST00000536145 ST20-MTHFSA0A0A6YYL1 179 aa9.1□□□□□ -0.95
CPSF7-215ENST00000536145 CARD11Q9BXL7 1154 aa9.1□□□□□ -0.95
CPSF7-215ENST00000536145 RSPH6AQ9H0K4 717 aa9.1□□□□□ -0.95
CPSF7-215ENST00000536145 EIF4G3O43432 1585 aaKnown RBP9.1□□□□□ -0.95
CPSF7-215ENST00000536145 ZNF521Q96K83 1311 aa9.09□□□□□ -0.95
CPSF7-215ENST00000536145 PLIN1O60240 522 aa9.09□□□□□ -0.95
CPSF7-215ENST00000536145 ANKRD30AQ9BXX3 1397 aa9.09□□□□□ -0.95
CPSF7-215ENST00000536145 USP19O94966 1318 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 VIRMAQ69YN4 1812 aaKnown RBP9.08□□□□□ -0.96
CPSF7-215ENST00000536145 PRAG1Q86YV5 1406 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 ANKRD50Q9ULJ7 1429 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 C20orf194Q5TEA3 1177 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 DCAF11Q8TEB1 546 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 POLR3GLQ9BT43 218 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 PRDM15P57071 1507 aaPredicted RBP9.08□□□□□ -0.96
CPSF7-215ENST00000536145 CDC42BPAQ5VT25 1732 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 ABCC10Q5T3U5 1492 aa9.08□□□□□ -0.96
CPSF7-215ENST00000536145 FRAT2O75474 233 aaPredicted RBP9.07□□□□□ -0.96
CPSF7-215ENST00000536145 PRG4Q92954 1404 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-215ENST00000536145 CNGB1Q14028 1251 aaPredicted RBP9.06□□□□□ -0.96
CPSF7-215ENST00000536145 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
CPSF7-215ENST00000536145 TRMT2AQ8IZ69 625 aaKnown RBP9.06□□□□□ -0.96
CPSF7-215ENST00000536145 NLRP1Q9C000 1473 aa9.05□□□□□ -0.96
CPSF7-215ENST00000536145 EIF3AQ14152 1382 aaKnown RBP9.05□□□□□ -0.96
CPSF7-215ENST00000536145 PLEKHH1Q9ULM0 1364 aa9.05□□□□□ -0.96
CPSF7-215ENST00000536145 TESK2Q96S53 571 aa9.05□□□□□ -0.96
CPSF7-215ENST00000536145 ZNF326Q5BKZ1 582 aaKnown RBP9.04□□□□□ -0.96
CPSF7-215ENST00000536145 RRAGDQ9NQL2 400 aaPredicted RBP9.04□□□□□ -0.96
CPSF7-215ENST00000536145 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
CPSF7-215ENST00000536145 DISP3Q9P2K9 1392 aa9.03□□□□□ -0.96
CPSF7-215ENST00000536145 ABCC2Q92887 1545 aa9.03□□□□□ -0.96
CPSF7-215ENST00000536145 NUP160Q12769 1436 aa9.03□□□□□ -0.96
CPSF7-215ENST00000536145 SYNJ2O15056 1496 aa9.02□□□□□ -0.96
CPSF7-215ENST00000536145 A2MP01023 1474 aa9.02□□□□□ -0.96
CPSF7-215ENST00000536145 RNF17Q9BXT8 1623 aaKnown RBP9.02□□□□□ -0.96
CPSF7-215ENST00000536145 NUP155O75694 1391 aa9.02□□□□□ -0.97
CPSF7-215ENST00000536145 CFDP1Q9UEE9 299 aaPredicted RBP9.02□□□□□ -0.97
CPSF7-215ENST00000536145 C9orf84Q5VXU9 1444 aa9.02□□□□□ -0.97
CPSF7-215ENST00000536145 ERBINQ96RT1 1412 aa9.02□□□□□ -0.97
CPSF7-215ENST00000536145 PLA2R1Q13018 1463 aa9.02□□□□□ -0.97
CPSF7-215ENST00000536145 IFT140Q96RY7 1462 aa9.02□□□□□ -0.97
CPSF7-215ENST00000536145 SLFN5Q08AF3 891 aa9.01□□□□□ -0.97
CPSF7-215ENST00000536145 ANTXR1Q9H6X2 564 aa9.01□□□□□ -0.97
CPSF7-215ENST00000536145 EIF2AK4Q9P2K8 1649 aaKnown RBP9.01□□□□□ -0.97
CPSF7-215ENST00000536145 CCDC141Q6ZP82 1450 aa9.01□□□□□ -0.97
CPSF7-215ENST00000536145 ZMYM3Q14202 1370 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 UNC13BO14795 1591 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 PIK3C2GO75747 1445 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 FSD2A1L4K1 749 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 PLPPR3Q6T4P5 718 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 POGKQ9P215 609 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 WDR7Q9Y4E6 1490 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 FAM135AQ9P2D6 1515 aa9□□□□□ -0.97
CPSF7-215ENST00000536145 CCDC144AA2RUR9 1427 aa8.99□□□□□ -0.97
CPSF7-215ENST00000536145 ADAMTS8Q9UP79 889 aa8.99□□□□□ -0.97
CPSF7-215ENST00000536145 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
CPSF7-215ENST00000536145 ATP10AO60312 1499 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 ARID3CA6NKF2 412 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 NBPF1Q3BBV0 1214 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 L1TD1Q5T7N2 865 aaKnown RBP8.98□□□□□ -0.97
CPSF7-215ENST00000536145 PANK3Q9H999 370 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 DAXXQ9UER7 740 aaPredicted RBP8.98□□□□□ -0.97
CPSF7-215ENST00000536145 PLXNC1O60486 1568 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 ABCA8O94911 1581 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
CPSF7-215ENST00000536145 PPP2R1AP30153 589 aa8.97□□□□□ -0.97
CPSF7-215ENST00000536145 GOLGA2Q08379 1002 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms