RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 FAM135AQ9P2D6 1515 aa24.39■■□□□ 1.49
RAB40C-203ENST00000535977 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.38■■□□□ 1.492e-6■■■□□ 16.1
RAB40C-203ENST00000535977 ZNF326Q5BKZ1 582 aaKnown RBP24.37■■□□□ 1.49
RAB40C-203ENST00000535977 CCDC136Q96JN2 1154 aa24.35■■□□□ 1.49
RAB40C-203ENST00000535977 SYCP2Q9BX26 1530 aa24.35■■□□□ 1.49
RAB40C-203ENST00000535977 TTC37Q6PGP7 1564 aa24.35■■□□□ 1.49
RAB40C-203ENST00000535977 MYO5CQ9NQX4 1742 aa24.35■■□□□ 1.49
RAB40C-203ENST00000535977 CARD11Q9BXL7 1154 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 DNAJC5Q9H3Z4 198 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 PLXNC1O60486 1568 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 BCORL1Q5H9F3 1711 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 UNC13BO14795 1591 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 ERCC6L2Q5T890 1561 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 DHX29Q7Z478 1369 aaKnown RBP24.34■■□□□ 1.49
RAB40C-203ENST00000535977 ZBED9Q6R2W3 1325 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 CCDC184Q52MB2 194 aa24.34■■□□□ 1.49
RAB40C-203ENST00000535977 NOP58Q9Y2X3 529 aaKnown RBP24.33■■□□□ 1.48
RAB40C-203ENST00000535977 UHRF1BP1LA0JNW5 1464 aa24.32■■□□□ 1.48
RAB40C-203ENST00000535977 CCDC144AA2RUR9 1427 aa24.29■■□□□ 1.48
RAB40C-203ENST00000535977 FAM9BQ8IZU0 186 aa24.29■■□□□ 1.48
RAB40C-203ENST00000535977 DCAF11Q8TEB1 546 aa24.29■■□□□ 1.48
RAB40C-203ENST00000535977 DUOX2Q9NRD8 1548 aa24.28■■□□□ 1.48
RAB40C-203ENST00000535977 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
RAB40C-203ENST00000535977 PLCH2O75038 1416 aa24.27■■□□□ 1.48
RAB40C-203ENST00000535977 KTN1Q86UP2 1357 aaKnown RBP24.26■■□□□ 1.47
RAB40C-203ENST00000535977 IQGAP3Q86VI3 1631 aa24.25■■□□□ 1.47
RAB40C-203ENST00000535977 ERBINQ96RT1 1412 aa24.25■■□□□ 1.47
RAB40C-203ENST00000535977 EFCAB2Q5VUJ9 269 aa24.25■■□□□ 1.47
RAB40C-203ENST00000535977 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
RAB40C-203ENST00000535977 KDM2AQ9Y2K7 1162 aa24.25■■□□□ 1.47
RAB40C-203ENST00000535977 IL27Q8NEV9 243 aa24.24■■□□□ 1.47
RAB40C-203ENST00000535977 ATP10AO60312 1499 aa24.22■■□□□ 1.47
RAB40C-203ENST00000535977 PRAG1Q86YV5 1406 aa24.21■■□□□ 1.47
RAB40C-203ENST00000535977 PPP4R2Q9NY27 417 aa24.21■■□□□ 1.47
RAB40C-203ENST00000535977 ZCCHC11Q5TAX3 1644 aaKnown RBP24.2■■□□□ 1.47
RAB40C-203ENST00000535977 MAGI2Q86UL8 1455 aa24.2■■□□□ 1.46
RAB40C-203ENST00000535977 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.46
RAB40C-203ENST00000535977 POLR3GLQ9BT43 218 aa24.19■■□□□ 1.46
RAB40C-203ENST00000535977 UBE2Q2Q8WVN8 375 aa24.18■■□□□ 1.46
RAB40C-203ENST00000535977 TRPM1Q7Z4N2 1603 aa24.18■■□□□ 1.46
RAB40C-203ENST00000535977 ARAP3Q8WWN8 1544 aa24.18■■□□□ 1.46
RAB40C-203ENST00000535977 PLA2R1Q13018 1463 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 RTN4Q9NQC3 1192 aaKnown RBP24.17■■□□□ 1.46
RAB40C-203ENST00000535977 LAMC1P11047 1609 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 GPRASP1Q5JY77 1395 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 RIMBP3CA6NJZ7 1639 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 RIMBP3BA6NNM3 1639 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 RIMBP3Q9UFD9 1639 aa24.17■■□□□ 1.46
RAB40C-203ENST00000535977 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.16■■□□□ 1.46
RAB40C-203ENST00000535977 RALBP1Q15311 655 aa24.15■■□□□ 1.46
RAB40C-203ENST00000535977 ABCC1P33527 1531 aa24.14■■□□□ 1.46
RAB40C-203ENST00000535977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.46
RAB40C-203ENST00000535977 EIF2AK4Q9P2K8 1649 aaKnown RBP24.13■■□□□ 1.45
RAB40C-203ENST00000535977 RTEL1-TNFRSF6BF6WH68 1400 aa24.13■■□□□ 1.45
RAB40C-203ENST00000535977 RTL5Q5HYW3 569 aaPredicted RBP24.12■■□□□ 1.45
RAB40C-203ENST00000535977 A2MP01023 1474 aa24.11■■□□□ 1.45
RAB40C-203ENST00000535977 E9PCH4 1651 aa24.1■■□□□ 1.45
RAB40C-203ENST00000535977 BRD4O60885 1362 aaPredicted RBP24.1■■□□□ 1.45
RAB40C-203ENST00000535977 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
RAB40C-203ENST00000535977 SMG6Q86US8 1419 aaKnown RBP24.1■■□□□ 1.45
RAB40C-203ENST00000535977 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
RAB40C-203ENST00000535977 PNISRQ8TF01 805 aaKnown RBP24.09■■□□□ 1.45
RAB40C-203ENST00000535977 MYBBP1AQ9BQG0 1328 aaKnown RBP24.08■■□□□ 1.45
RAB40C-203ENST00000535977 STAC3Q96MF2 364 aa24.08■■□□□ 1.44
RAB40C-203ENST00000535977 RGL3Q3MIN7 710 aa24.07■■□□□ 1.44
RAB40C-203ENST00000535977 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
RAB40C-203ENST00000535977 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
RAB40C-203ENST00000535977 TRAPPC8Q9Y2L5 1435 aa24.05■■□□□ 1.44
RAB40C-203ENST00000535977 SPAG9O60271 1321 aaKnown RBP24.04■■□□□ 1.44
RAB40C-203ENST00000535977 NUDCQ9Y266 331 aa24.02■■□□□ 1.44
RAB40C-203ENST00000535977 LRPPRCP42704 1394 aaKnown RBP24.02■■□□□ 1.44
RAB40C-203ENST00000535977 NBPF1Q3BBV0 1214 aa24.01■■□□□ 1.43
RAB40C-203ENST00000535977 COL17A1Q9UMD9 1497 aaPredicted RBP24■■□□□ 1.43
RAB40C-203ENST00000535977 IPO9Q96P70 1041 aaKnown RBP23.98■■□□□ 1.43
RAB40C-203ENST00000535977 WDR7Q9Y4E6 1490 aa23.98■■□□□ 1.43
RAB40C-203ENST00000535977 ZFYVE16Q7Z3T8 1539 aa23.97■■□□□ 1.43
RAB40C-203ENST00000535977 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
RAB40C-203ENST00000535977 NLRP13Q86W25 1043 aa23.97■■□□□ 1.43
RAB40C-203ENST00000535977 TESK2Q96S53 571 aa23.96■■□□□ 1.43
RAB40C-203ENST00000535977 TMF1P82094 1093 aa23.96■■□□□ 1.43
RAB40C-203ENST00000535977 RNF123Q5XPI4 1314 aa23.95■■□□□ 1.42
RAB40C-203ENST00000535977 CNGB1Q14028 1251 aaPredicted RBP23.95■■□□□ 1.42
RAB40C-203ENST00000535977 PTPRTO14522 1441 aa23.94■■□□□ 1.42
RAB40C-203ENST00000535977 ANP32AP39687 249 aaKnown RBP23.94■■□□□ 1.42
RAB40C-203ENST00000535977 TRPM2O94759 1503 aa23.94■■□□□ 1.42
RAB40C-203ENST00000535977 PER1O15534 1290 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-203ENST00000535977 ZBTB47Q9UFB7 747 aaPredicted RBP23.94■■□□□ 1.42
RAB40C-203ENST00000535977 DEPDC5O75140 1603 aa23.94■■□□□ 1.42
RAB40C-203ENST00000535977 RNF17Q9BXT8 1623 aaKnown RBP23.93■■□□□ 1.42
RAB40C-203ENST00000535977 KANK1Q14678 1352 aa23.93■■□□□ 1.42
RAB40C-203ENST00000535977 INSRP06213 1382 aa23.92■■□□□ 1.42
RAB40C-203ENST00000535977 ABCA9Q8IUA7 1624 aa23.92■■□□□ 1.42
RAB40C-203ENST00000535977 AFAP1Q8N556 730 aa23.91■■□□□ 1.42
RAB40C-203ENST00000535977 FANCAO15360 1455 aa23.9■■□□□ 1.42
RAB40C-203ENST00000535977 TET3O43151 1660 aa23.89■■□□□ 1.42
RAB40C-203ENST00000535977 ATP7AQ04656 1500 aa23.89■■□□□ 1.41
RAB40C-203ENST00000535977 INO80Q9ULG1 1556 aaPredicted RBP23.89■■□□□ 1.41
RAB40C-203ENST00000535977 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
RAB40C-203ENST00000535977 CEP152O94986 1710 aa23.88■■□□□ 1.41
RAB40C-203ENST00000535977 SPHKAPQ2M3C7 1700 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms