RNA–Protein interactions for RNA: ENST00000535835.5

SPARCL1-208, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-208ENST00000535835 DPYSL4O14531 572 aa8.55□□□□□ -1.04
SPARCL1-208ENST00000535835 PHF14O94880 888 aa8.54□□□□□ -1.04
SPARCL1-208ENST00000535835 LAPTM4AQ15012 233 aa8.54□□□□□ -1.04
SPARCL1-208ENST00000535835 PPP1R3GB7ZBB8 358 aa8.53□□□□□ -1.04
SPARCL1-208ENST00000535835 ITGBL1O95965 494 aaPredicted RBP8.53□□□□□ -1.04
SPARCL1-208ENST00000535835 TYW1BQ6NUM6 668 aa8.53□□□□□ -1.04
SPARCL1-208ENST00000535835 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
SPARCL1-208ENST00000535835 PROX2Q3B8N5 592 aa8.52□□□□□ -1.05
SPARCL1-208ENST00000535835 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
SPARCL1-208ENST00000535835 AMER1Q5JTC6 1135 aaPredicted RBP8.5□□□□□ -1.05
SPARCL1-208ENST00000535835 TRAF7Q6Q0C0 670 aa8.5□□□□□ -1.05
SPARCL1-208ENST00000535835 SPRYD3Q8NCJ5 442 aa8.49□□□□□ -1.05
SPARCL1-208ENST00000535835 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
SPARCL1-208ENST00000535835 C6orf132Q5T0Z8 1188 aa8.48□□□□□ -1.05
SPARCL1-208ENST00000535835 RABGEF1Q9UJ41 708 aa8.48□□□□□ -1.05
SPARCL1-208ENST00000535835 EPAS1Q99814 870 aa8.47□□□□□ -1.05
SPARCL1-208ENST00000535835 GFRA3O60609 400 aa8.46□□□□□ -1.06
SPARCL1-208ENST00000535835 KCNC4Q03721 635 aa8.46□□□□□ -1.06
SPARCL1-208ENST00000535835 PDIA6Q15084 440 aa8.46□□□□□ -1.06
SPARCL1-208ENST00000535835 DDX12PQ92771 950 aa8.46□□□□□ -1.06
SPARCL1-208ENST00000535835 NYAP1Q6ZVC0 841 aa8.45□□□□□ -1.06
SPARCL1-208ENST00000535835 PRIM1P49642 420 aaKnown RBP8.44□□□□□ -1.06
SPARCL1-208ENST00000535835 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
SPARCL1-208ENST00000535835 RBM33Q96EV2 1170 aaKnown RBP8.43□□□□□ -1.06
SPARCL1-208ENST00000535835 KIAA1468Q9P260 1216 aa8.43□□□□□ -1.06
SPARCL1-208ENST00000535835 ARIH1Q9Y4X5 557 aaPredicted RBP8.43□□□□□ -1.06
SPARCL1-208ENST00000535835 BCAMP50895 628 aa8.42□□□□□ -1.06
SPARCL1-208ENST00000535835 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
SPARCL1-208ENST00000535835 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
SPARCL1-208ENST00000535835 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.42□□□□□ -1.06
SPARCL1-208ENST00000535835 SOWAHBA6NEL2 793 aa8.41□□□□□ -1.06
SPARCL1-208ENST00000535835 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
SPARCL1-208ENST00000535835 TSR1Q2NL82 804 aaKnown RBP8.41□□□□□ -1.06
SPARCL1-208ENST00000535835 LAPTM4BQ86VI4 370 aa8.41□□□□□ -1.06
SPARCL1-208ENST00000535835 LCE2BO14633 110 aa8.4□□□□□ -1.06
SPARCL1-208ENST00000535835 E2F4Q16254 413 aa8.4□□□□□ -1.06
SPARCL1-208ENST00000535835 SPDYE16A6NNV3 312 aaPredicted RBP8.39□□□□□ -1.07
SPARCL1-208ENST00000535835 NBR1Q14596 966 aa8.39□□□□□ -1.07
SPARCL1-208ENST00000535835 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
SPARCL1-208ENST00000535835 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
SPARCL1-208ENST00000535835 ZFRQ96KR1 1074 aaKnown RBP8.38□□□□□ -1.07
SPARCL1-208ENST00000535835 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
SPARCL1-208ENST00000535835 WBP1LQ9NX94 342 aa8.37□□□□□ -1.07
SPARCL1-208ENST00000535835 FAM198AQ9UFP1 575 aa8.37□□□□□ -1.07
SPARCL1-208ENST00000535835 C3orf80F5H4A9 247 aa8.36□□□□□ -1.07
SPARCL1-208ENST00000535835 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
SPARCL1-208ENST00000535835 NRG2O14511 850 aaPredicted RBP8.35□□□□□ -1.07
SPARCL1-208ENST00000535835 MAP3K7O43318 606 aa8.35□□□□□ -1.07
SPARCL1-208ENST00000535835 OSBPP22059 807 aa8.34□□□□□ -1.07
SPARCL1-208ENST00000535835 FAM98CQ17RN3 349 aaKnown RBP8.34□□□□□ -1.07
SPARCL1-208ENST00000535835 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 PRSS12P56730 875 aa8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 CDCA7LQ96GN5 454 aa8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 PRKD2Q9BZL6 878 aa8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 CDHR5Q9HBB8 845 aa8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
SPARCL1-208ENST00000535835 SMAPO00193 183 aa8.29□□□□□ -1.08
SPARCL1-208ENST00000535835 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
SPARCL1-208ENST00000535835 PACS2Q86VP3 889 aa8.28□□□□□ -1.08
SPARCL1-208ENST00000535835 ZNF775Q96BV0 537 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-208ENST00000535835 NPDC1Q9NQX5 325 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-208ENST00000535835 TSHZ2Q9NRE2 1034 aa8.28□□□□□ -1.08
SPARCL1-208ENST00000535835 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-208ENST00000535835 LRCH3Q96II8 777 aa8.27□□□□□ -1.09
SPARCL1-208ENST00000535835 HPS5Q9UPZ3 1129 aa8.27□□□□□ -1.09
SPARCL1-208ENST00000535835 TTC13Q8NBP0 860 aa8.26□□□□□ -1.09
SPARCL1-208ENST00000535835 CERKQ8TCT0 537 aa8.26□□□□□ -1.09
SPARCL1-208ENST00000535835 V9GY48 417 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-208ENST00000535835 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
SPARCL1-208ENST00000535835 TATDN2Q93075 761 aa8.25□□□□□ -1.09
SPARCL1-208ENST00000535835 RBM27Q9P2N5 1060 aaKnown RBP8.23□□□□□ -1.09
SPARCL1-208ENST00000535835 PDZRN3Q9UPQ7 1066 aa8.23□□□□□ -1.09
SPARCL1-208ENST00000535835 MLLT3P42568 568 aaPredicted RBP8.22□□□□□ -1.09
SPARCL1-208ENST00000535835 PPP4CP60510 307 aa8.22□□□□□ -1.09
SPARCL1-208ENST00000535835 KCNV2Q8TDN2 545 aa8.22□□□□□ -1.09
SPARCL1-208ENST00000535835 PNMA3Q9UL41 463 aa8.22□□□□□ -1.09
SPARCL1-208ENST00000535835 PPP1R18Q6NYC8 613 aa8.21□□□□□ -1.1
SPARCL1-208ENST00000535835 NUDT18Q6ZVK8 323 aa8.21□□□□□ -1.1
SPARCL1-208ENST00000535835 NBPF26B4DH59 902 aa8.2□□□□□ -1.1
SPARCL1-208ENST00000535835 TJAP1Q5JTD0 557 aa8.2□□□□□ -1.1
SPARCL1-208ENST00000535835 PADI6Q6TGC4 694 aa8.2□□□□□ -1.1
SPARCL1-208ENST00000535835 ARHGEF1Q92888 912 aaKnown RBP8.19□□□□□ -1.1
SPARCL1-208ENST00000535835 IL21Q9HBE4 155 aa8.17□□□□□ -1.1
SPARCL1-208ENST00000535835 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.17□□□□□ -1.1
SPARCL1-208ENST00000535835 EYA1Q99502 592 aa8.16□□□□□ -1.1
SPARCL1-208ENST00000535835 APLP1P51693 650 aa8.15□□□□□ -1.1
SPARCL1-208ENST00000535835 MTRQ99707 1265 aa8.14□□□□□ -1.11
SPARCL1-208ENST00000535835 PTGDRQ13258 359 aa8.13□□□□□ -1.11
SPARCL1-208ENST00000535835 SWT1Q5T5J6 900 aaKnown RBP8.13□□□□□ -1.11
SPARCL1-208ENST00000535835 GGCXP38435 758 aa8.12□□□□□ -1.11
SPARCL1-208ENST00000535835 ZNF516Q92618 1163 aa8.12□□□□□ -1.11
SPARCL1-208ENST00000535835 RNF40O75150 1001 aa8.08□□□□□ -1.12
SPARCL1-208ENST00000535835 PKDCCQ504Y2 493 aa8.08□□□□□ -1.12
SPARCL1-208ENST00000535835 NKX2-3Q8TAU0 364 aa8.08□□□□□ -1.12
SPARCL1-208ENST00000535835 ADGRG1Q9Y653 693 aa8.08□□□□□ -1.12
SPARCL1-208ENST00000535835 SEMA3EO15041 775 aa8.07□□□□□ -1.12
SPARCL1-208ENST00000535835 FAM161AQ3B820 660 aa8.06□□□□□ -1.12
SPARCL1-208ENST00000535835 SLF2Q8IX21 1173 aa8.06□□□□□ -1.12
SPARCL1-208ENST00000535835 DGAT1O75907 488 aa8.05□□□□□ -1.12
SPARCL1-208ENST00000535835 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms