RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MINK1Q8N4C8 1332 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-202ENST00000535689 DDX12PQ92771 950 aa6.8□□□□□ -1.32
SNHG1-202ENST00000535689 JPH4Q96JJ6 628 aa6.8□□□□□ -1.32
SNHG1-202ENST00000535689 RBM26Q5T8P6 1007 aaKnown RBP6.79□□□□□ -1.32
SNHG1-202ENST00000535689 LHX6Q9UPM6 363 aa6.79□□□□□ -1.32
SNHG1-202ENST00000535689 GNPATO15228 680 aa6.78□□□□□ -1.32
SNHG1-202ENST00000535689 MAP3K7O43318 606 aa6.78□□□□□ -1.32
SNHG1-202ENST00000535689 OSBPP22059 807 aa6.78□□□□□ -1.32
SNHG1-202ENST00000535689 KRTAP3-3Q9BYR6 98 aa6.78□□□□□ -1.32
SNHG1-202ENST00000535689 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
SNHG1-202ENST00000535689 EN1Q05925 392 aaPredicted RBP6.77□□□□□ -1.33
SNHG1-202ENST00000535689 PPP4R3BQ5MIZ7 849 aa6.77□□□□□ -1.33
SNHG1-202ENST00000535689 MAP2K5Q13163 448 aa6.76□□□□□ -1.33
SNHG1-202ENST00000535689 ZDHHC16Q969W1 377 aa6.76□□□□□ -1.33
SNHG1-202ENST00000535689 KDM4FA0A1W2PPD8 638 aa6.75□□□□□ -1.33
SNHG1-202ENST00000535689 TMEM132AQ24JP5 1023 aa6.75□□□□□ -1.33
SNHG1-202ENST00000535689 SLC24A3Q9HC58 644 aa6.75□□□□□ -1.33
SNHG1-202ENST00000535689 ZNF454Q8N9F8 522 aa6.74□□□□□ -1.33
SNHG1-202ENST00000535689 RBM27Q9P2N5 1060 aaKnown RBP6.74□□□□□ -1.33
SNHG1-202ENST00000535689 OATP04181 439 aa6.73□□□□□ -1.33
SNHG1-202ENST00000535689 FOSBP53539 338 aa6.73□□□□□ -1.33
SNHG1-202ENST00000535689 NEUROD2Q15784 382 aa6.73□□□□□ -1.33
SNHG1-202ENST00000535689 POTEEQ6S8J3 1075 aa6.73□□□□□ -1.33
SNHG1-202ENST00000535689 AXIN2Q9Y2T1 843 aa6.73□□□□□ -1.33
SNHG1-202ENST00000535689 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
SNHG1-202ENST00000535689 PCDHGA10Q9Y5H3 936 aa6.72□□□□□ -1.33
SNHG1-202ENST00000535689 IRF6O14896 467 aa6.71□□□□□ -1.34
SNHG1-202ENST00000535689 PTPREP23469 700 aa6.71□□□□□ -1.34
SNHG1-202ENST00000535689 MMRN1Q13201 1228 aa6.71□□□□□ -1.34
SNHG1-202ENST00000535689 PTGDRQ13258 359 aa6.71□□□□□ -1.34
SNHG1-202ENST00000535689 ZNF687Q8N1G0 1237 aa6.71□□□□□ -1.34
SNHG1-202ENST00000535689 C6orf132Q5T0Z8 1188 aa6.69□□□□□ -1.34
SNHG1-202ENST00000535689 RBM33Q96EV2 1170 aaKnown RBP6.69□□□□□ -1.34
SNHG1-202ENST00000535689 ONECUT3O60422 494 aaPredicted RBP6.68□□□□□ -1.34
SNHG1-202ENST00000535689 SLC4A3P48751 1232 aa6.68□□□□□ -1.34
SNHG1-202ENST00000535689 BCL2L12Q9HB09 334 aa6.68□□□□□ -1.34
SNHG1-202ENST00000535689 TRIM66O15016 1216 aa6.67□□□□□ -1.34
SNHG1-202ENST00000535689 PSEN2P49810 448 aa6.67□□□□□ -1.34
SNHG1-202ENST00000535689 RBM46Q8TBY0 533 aaKnown RBP6.67□□□□□ -1.34
SNHG1-202ENST00000535689 DDRGK1Q96HY6 314 aa6.67□□□□□ -1.34
SNHG1-202ENST00000535689 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
SNHG1-202ENST00000535689 CLCN1P35523 988 aa6.66□□□□□ -1.34
SNHG1-202ENST00000535689 HDGFP51858 240 aaKnown RBP6.66□□□□□ -1.34
SNHG1-202ENST00000535689 PDE4DQ08499 809 aa6.66□□□□□ -1.34
SNHG1-202ENST00000535689 PACS2Q86VP3 889 aa6.66□□□□□ -1.34
SNHG1-202ENST00000535689 PBX2P40425 430 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 PRSS12P56730 875 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 AMHR2Q16671 573 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 RSPH4AQ5TD94 716 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 DMRTA1Q5VZB9 504 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 CCDC102AQ96A19 550 aa6.65□□□□□ -1.34
SNHG1-202ENST00000535689 NBPF26B4DH59 902 aa6.64□□□□□ -1.35
SNHG1-202ENST00000535689 GPR37O15354 613 aa6.64□□□□□ -1.35
SNHG1-202ENST00000535689 BRPF1P55201 1214 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-202ENST00000535689 TTLL12Q14166 644 aaPredicted RBP6.64□□□□□ -1.35
SNHG1-202ENST00000535689 DIXDC1Q155Q3 683 aa6.64□□□□□ -1.35
SNHG1-202ENST00000535689 ANKRD13DQ6ZTN6 518 aa6.64□□□□□ -1.35
SNHG1-202ENST00000535689 NECTIN2Q92692 538 aa6.63□□□□□ -1.35
SNHG1-202ENST00000535689 ADAM33Q9BZ11 813 aa6.63□□□□□ -1.35
SNHG1-202ENST00000535689 LSM11P83369 360 aaKnown RBP eCLIP6.62□□□□□ -1.35
SNHG1-202ENST00000535689 CDCA7LQ96GN5 454 aa6.62□□□□□ -1.35
SNHG1-202ENST00000535689 KCNK17Q96T54 332 aa6.62□□□□□ -1.35
SNHG1-202ENST00000535689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.61□□□□□ -1.35
SNHG1-202ENST00000535689 TSR1Q2NL82 804 aaKnown RBP6.61□□□□□ -1.35
SNHG1-202ENST00000535689 SULF1Q8IWU6 871 aa6.61□□□□□ -1.35
SNHG1-202ENST00000535689 RSPH6AQ9H0K4 717 aa6.61□□□□□ -1.35
SNHG1-202ENST00000535689 GPCPD1Q9NPB8 672 aa6.61□□□□□ -1.35
SNHG1-202ENST00000535689 NPDC1Q9NQX5 325 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-202ENST00000535689 ARHGAP33O14559 1287 aa6.6□□□□□ -1.35
SNHG1-202ENST00000535689 KDM4CQ9H3R0 1056 aa6.6□□□□□ -1.35
SNHG1-202ENST00000535689 PRIM1P49642 420 aaKnown RBP6.59□□□□□ -1.35
SNHG1-202ENST00000535689 STAC3Q96MF2 364 aa6.59□□□□□ -1.35
SNHG1-202ENST00000535689 SLC4A5Q9BY07 1137 aa6.59□□□□□ -1.35
SNHG1-202ENST00000535689 CDHR5Q9HBB8 845 aa6.59□□□□□ -1.35
SNHG1-202ENST00000535689 TRIM6-TRIM34B2RNG4 842 aa6.58□□□□□ -1.36
SNHG1-202ENST00000535689 PADI6Q6TGC4 694 aa6.58□□□□□ -1.36
SNHG1-202ENST00000535689 NBPF3Q9H094 633 aa6.58□□□□□ -1.36
SNHG1-202ENST00000535689 DNAJB2P25686 324 aa6.57□□□□□ -1.36
SNHG1-202ENST00000535689 TTC13Q8NBP0 860 aa6.57□□□□□ -1.36
SNHG1-202ENST00000535689 GOPCQ9HD26 462 aa6.57□□□□□ -1.36
SNHG1-202ENST00000535689 GTF3C3Q9Y5Q9 886 aa6.57□□□□□ -1.36
SNHG1-202ENST00000535689 COL9A1P20849 921 aa6.56□□□□□ -1.36
SNHG1-202ENST00000535689 ADGRD1Q6QNK2 874 aa6.56□□□□□ -1.36
SNHG1-202ENST00000535689 METTL3Q86U44 580 aaKnown RBP6.56□□□□□ -1.36
SNHG1-202ENST00000535689 PXYLP1Q8TE99 480 aa6.56□□□□□ -1.36
SNHG1-202ENST00000535689 PNMA3Q9UL41 463 aa6.56□□□□□ -1.36
SNHG1-202ENST00000535689 ADGRG1Q9Y653 693 aa6.56□□□□□ -1.36
SNHG1-202ENST00000535689 ABCC9O60706 1549 aa6.55□□□□□ -1.36
SNHG1-202ENST00000535689 RABGEF1Q9UJ41 708 aa6.55□□□□□ -1.36
SNHG1-202ENST00000535689 FECHP22830 423 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 PROX2Q3B8N5 592 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 GIGYF2Q6Y7W6 1299 aaKnown RBP6.54□□□□□ -1.36
SNHG1-202ENST00000535689 LAPTM4BQ86VI4 370 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 PARP9Q8IXQ6 854 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 TATDN2Q93075 761 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 MYT1LQ9UL68 1186 aa6.54□□□□□ -1.36
SNHG1-202ENST00000535689 TK2O00142 265 aa6.53□□□□□ -1.36
SNHG1-202ENST00000535689 SSTR3P32745 418 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-202ENST00000535689 MDM2Q00987 491 aaPredicted RBP6.53□□□□□ -1.36
SNHG1-202ENST00000535689 NUDT18Q6ZVK8 323 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms