RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 KDM5CP41229 1560 aa19.02■□□□□ 0.63
NEK4-207ENST00000535191 ST20-MTHFSA0A0A6YYL1 179 aa19.01■□□□□ 0.63
NEK4-207ENST00000535191 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
NEK4-207ENST00000535191 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
NEK4-207ENST00000535191 PLA2R1Q13018 1463 aa19■□□□□ 0.63
NEK4-207ENST00000535191 BCORL1Q5H9F3 1711 aa19■□□□□ 0.63
NEK4-207ENST00000535191 POLR1AO95602 1720 aaPredicted RBP18.99■□□□□ 0.63
NEK4-207ENST00000535191 UNC13BO14795 1591 aa18.99■□□□□ 0.63
NEK4-207ENST00000535191 DUOX2Q9NRD8 1548 aa18.99■□□□□ 0.63
NEK4-207ENST00000535191 TRAPPC8Q9Y2L5 1435 aa18.98■□□□□ 0.63
NEK4-207ENST00000535191 ROCK2O75116 1388 aaKnown RBP18.97■□□□□ 0.63
NEK4-207ENST00000535191 ERBINQ96RT1 1412 aa18.96■□□□□ 0.63
NEK4-207ENST00000535191 CNGB1Q14028 1251 aaPredicted RBP18.96■□□□□ 0.63
NEK4-207ENST00000535191 SPAG9O60271 1321 aaKnown RBP18.96■□□□□ 0.63
NEK4-207ENST00000535191 ABCC1P33527 1531 aa18.96■□□□□ 0.62
NEK4-207ENST00000535191 AFAP1Q8N556 730 aa18.95■□□□□ 0.62
NEK4-207ENST00000535191 ARAP3Q8WWN8 1544 aa18.95■□□□□ 0.62
NEK4-207ENST00000535191 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
NEK4-207ENST00000535191 IQGAP3Q86VI3 1631 aa18.92■□□□□ 0.62
NEK4-207ENST00000535191 NBPF1Q3BBV0 1214 aa18.92■□□□□ 0.62
NEK4-207ENST00000535191 WDR7Q9Y4E6 1490 aa18.91■□□□□ 0.62
NEK4-207ENST00000535191 TSHZ2Q9NRE2 1034 aa18.9■□□□□ 0.62
NEK4-207ENST00000535191 RTEL1-TNFRSF6BF6WH68 1400 aa18.9■□□□□ 0.62
NEK4-207ENST00000535191 ZBED9Q6R2W3 1325 aa18.9■□□□□ 0.62
NEK4-207ENST00000535191 ATP10AO60312 1499 aa18.89■□□□□ 0.62
NEK4-207ENST00000535191 MAGI2Q86UL8 1455 aa18.89■□□□□ 0.62
NEK4-207ENST00000535191 A2MP01023 1474 aa18.89■□□□□ 0.61
NEK4-207ENST00000535191 GPRASP1Q5JY77 1395 aa18.86■□□□□ 0.61
NEK4-207ENST00000535191 TMC1Q8TDI8 760 aa18.84■□□□□ 0.61
NEK4-207ENST00000535191 TRPM1Q7Z4N2 1603 aa18.83■□□□□ 0.61
NEK4-207ENST00000535191 ABCA9Q8IUA7 1624 aa18.83■□□□□ 0.6
NEK4-207ENST00000535191 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
NEK4-207ENST00000535191 FANCAO15360 1455 aa18.82■□□□□ 0.6
NEK4-207ENST00000535191 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
NEK4-207ENST00000535191 RALBP1Q15311 655 aa18.82■□□□□ 0.6
NEK4-207ENST00000535191 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
NEK4-207ENST00000535191 PNISRQ8TF01 805 aaKnown RBP18.82■□□□□ 0.6
NEK4-207ENST00000535191 ZFYVE16Q7Z3T8 1539 aa18.81■□□□□ 0.6
NEK4-207ENST00000535191 TESK2Q96S53 571 aa18.8■□□□□ 0.6
NEK4-207ENST00000535191 ASXL2Q76L83 1435 aa18.8■□□□□ 0.6
NEK4-207ENST00000535191 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
NEK4-207ENST00000535191 SCAPERQ9BY12 1400 aa18.79■□□□□ 0.6
NEK4-207ENST00000535191 KIF3BO15066 747 aa18.78■□□□□ 0.6
NEK4-207ENST00000535191 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
NEK4-207ENST00000535191 NPM1P06748 294 aaKnown RBP eCLIP18.78■□□□□ 0.6
NEK4-207ENST00000535191 ERICH6BQ5W0A0 696 aa18.78■□□□□ 0.6
NEK4-207ENST00000535191 KANK1Q14678 1352 aa18.77■□□□□ 0.6
NEK4-207ENST00000535191 ADGRL1O94910 1474 aa18.76■□□□□ 0.59
NEK4-207ENST00000535191 ATP7AQ04656 1500 aa18.76■□□□□ 0.59
NEK4-207ENST00000535191 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
NEK4-207ENST00000535191 STAC3Q96MF2 364 aa18.75■□□□□ 0.59
NEK4-207ENST00000535191 PTPRTO14522 1441 aa18.75■□□□□ 0.59
NEK4-207ENST00000535191 BRD4O60885 1362 aaPredicted RBP18.75■□□□□ 0.59
NEK4-207ENST00000535191 TMF1P82094 1093 aa18.75■□□□□ 0.59
NEK4-207ENST00000535191 INO80Q9ULG1 1556 aaPredicted RBP18.74■□□□□ 0.59
NEK4-207ENST00000535191 PRDM15P57071 1507 aaPredicted RBP18.74■□□□□ 0.59
NEK4-207ENST00000535191 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
NEK4-207ENST00000535191 DISP3Q9P2K9 1392 aa18.73■□□□□ 0.59
NEK4-207ENST00000535191 LAMC1P11047 1609 aa18.73■□□□□ 0.59
NEK4-207ENST00000535191 DEPDC5O75140 1603 aa18.72■□□□□ 0.59
NEK4-207ENST00000535191 E9PCH4 1651 aa18.72■□□□□ 0.59
NEK4-207ENST00000535191 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.59
NEK4-207ENST00000535191 PANK3Q9H999 370 aa18.71■□□□□ 0.58
NEK4-207ENST00000535191 TRPM2O94759 1503 aa18.7■□□□□ 0.58
NEK4-207ENST00000535191 PPP4R2Q9NY27 417 aa18.7■□□□□ 0.58
NEK4-207ENST00000535191 SMG6Q86US8 1419 aaKnown RBP18.7■□□□□ 0.58
NEK4-207ENST00000535191 WASHC2CQ9Y4E1 1318 aa18.7■□□□□ 0.58
NEK4-207ENST00000535191 NLRP13Q86W25 1043 aa18.69■□□□□ 0.58
NEK4-207ENST00000535191 LRPPRCP42704 1394 aaKnown RBP18.69■□□□□ 0.58
NEK4-207ENST00000535191 PARD3Q8TEW0 1356 aa18.69■□□□□ 0.58
NEK4-207ENST00000535191 NUDCQ9Y266 331 aa18.68■□□□□ 0.58
NEK4-207ENST00000535191 TET3O43151 1660 aa18.68■□□□□ 0.58
NEK4-207ENST00000535191 SENP3-EIF4A1A0A087X0R7 540 aa18.67■□□□□ 0.58
NEK4-207ENST00000535191 VWDEQ8N2E2 1590 aa18.66■□□□□ 0.58
NEK4-207ENST00000535191 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
NEK4-207ENST00000535191 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
NEK4-207ENST00000535191 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
NEK4-207ENST00000535191 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
NEK4-207ENST00000535191 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
NEK4-207ENST00000535191 CEP152O94986 1710 aa18.63■□□□□ 0.57
NEK4-207ENST00000535191 CD109Q6YHK3 1445 aa18.63■□□□□ 0.57
NEK4-207ENST00000535191 MADDQ8WXG6 1647 aa18.62■□□□□ 0.57
NEK4-207ENST00000535191 CDCA8Q53HL2 280 aa18.61■□□□□ 0.57
NEK4-207ENST00000535191 RBM19Q9Y4C8 960 aaKnown RBP18.61■□□□□ 0.57
NEK4-207ENST00000535191 KIDINS220Q9ULH0 1771 aa18.61■□□□□ 0.57
NEK4-207ENST00000535191 RNF17Q9BXT8 1623 aaKnown RBP18.61■□□□□ 0.57
NEK4-207ENST00000535191 SCAF11Q99590 1463 aaKnown RBP18.6■□□□□ 0.57
NEK4-207ENST00000535191 RNF123Q5XPI4 1314 aa18.58■□□□□ 0.57
NEK4-207ENST00000535191 MROH1Q8NDA8 1641 aa18.58■□□□□ 0.57
NEK4-207ENST00000535191 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
NEK4-207ENST00000535191 B4GALNT3Q6L9W6 998 aa18.57■□□□□ 0.56
NEK4-207ENST00000535191 KNSTRNQ9Y448 316 aa18.57■□□□□ 0.56
NEK4-207ENST00000535191 NEURL4Q96JN8 1562 aa18.56■□□□□ 0.56
NEK4-207ENST00000535191 POGZQ7Z3K3 1410 aa18.56■□□□□ 0.56
NEK4-207ENST00000535191 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
NEK4-207ENST00000535191 GGT6Q6P531 493 aa18.55■□□□□ 0.56
NEK4-207ENST00000535191 SALL2Q9Y467 1007 aaPredicted RBP18.55■□□□□ 0.56
NEK4-207ENST00000535191 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
NEK4-207ENST00000535191 MLH3Q9UHC1 1453 aa18.54■□□□□ 0.56
NEK4-207ENST00000535191 EFCAB6Q5THR3 1501 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms