RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 FBXW7Q969H0 707 aa10.15□□□□□ -0.78
RDX-215ENST00000533961 DDX27Q96GQ7 796 aaKnown RBP10.14□□□□□ -0.79
RDX-215ENST00000533961 ZFRQ96KR1 1074 aaKnown RBP10.14□□□□□ -0.79
RDX-215ENST00000533961 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
RDX-215ENST00000533961 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
RDX-215ENST00000533961 COL9A1P20849 921 aa10.13□□□□□ -0.79
RDX-215ENST00000533961 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
RDX-215ENST00000533961 TYW1BQ6NUM6 668 aa10.12□□□□□ -0.79
RDX-215ENST00000533961 WBP1LQ9NX94 342 aa10.12□□□□□ -0.79
RDX-215ENST00000533961 KIAA1468Q9P260 1216 aa10.12□□□□□ -0.79
RDX-215ENST00000533961 PHF14O94880 888 aa10.1□□□□□ -0.79
RDX-215ENST00000533961 MFSD10Q14728 455 aa10.07□□□□□ -0.8
RDX-215ENST00000533961 TRAF7Q6Q0C0 670 aa10.07□□□□□ -0.8
RDX-215ENST00000533961 GFRA3O60609 400 aa10.06□□□□□ -0.8
RDX-215ENST00000533961 EMILIN3Q9NT22 766 aa10.06□□□□□ -0.8
RDX-215ENST00000533961 TSR3Q9UJK0 312 aaKnown RBP10.06□□□□□ -0.8
RDX-215ENST00000533961 FAM98CQ17RN3 349 aaKnown RBP10.05□□□□□ -0.8
RDX-215ENST00000533961 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.05□□□□□ -0.8
RDX-215ENST00000533961 SEPT9Q9UHD8 586 aaPredicted RBP10.05□□□□□ -0.8
RDX-215ENST00000533961 LRCH3Q96II8 777 aa10.04□□□□□ -0.8
RDX-215ENST00000533961 EPAS1Q99814 870 aa10.04□□□□□ -0.8
RDX-215ENST00000533961 TRIM6-TRIM34B2RNG4 842 aa10.03□□□□□ -0.8
RDX-215ENST00000533961 C6orf132Q5T0Z8 1188 aa10.03□□□□□ -0.8
RDX-215ENST00000533961 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
RDX-215ENST00000533961 LCE2BO14633 110 aa9.99□□□□□ -0.81
RDX-215ENST00000533961 GTPBP6O43824 516 aaPredicted RBP9.99□□□□□ -0.81
RDX-215ENST00000533961 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
RDX-215ENST00000533961 PPP4CP60510 307 aa9.96□□□□□ -0.82
RDX-215ENST00000533961 PRKD2Q9BZL6 878 aa9.96□□□□□ -0.82
RDX-215ENST00000533961 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
RDX-215ENST00000533961 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
RDX-215ENST00000533961 V9GY48 417 aaPredicted RBP9.93□□□□□ -0.82
RDX-215ENST00000533961 TJAP1Q5JTD0 557 aa9.92□□□□□ -0.82
RDX-215ENST00000533961 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
RDX-215ENST00000533961 IL21Q9HBE4 155 aa9.89□□□□□ -0.83
RDX-215ENST00000533961 DPYSL4O14531 572 aa9.88□□□□□ -0.83
RDX-215ENST00000533961 ZNF787Q6DD87 383 aa9.88□□□□□ -0.83
RDX-215ENST00000533961 PPP1R18Q6NYC8 613 aa9.88□□□□□ -0.83
RDX-215ENST00000533961 TSKSQ9UJT2 592 aa9.88□□□□□ -0.83
RDX-215ENST00000533961 DDX12PQ92771 950 aa9.87□□□□□ -0.83
RDX-215ENST00000533961 MTRQ99707 1265 aa9.87□□□□□ -0.83
RDX-215ENST00000533961 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
RDX-215ENST00000533961 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.85□□□□□ -0.83
RDX-215ENST00000533961 MAP3K7O43318 606 aa9.84□□□□□ -0.83
RDX-215ENST00000533961 EN1Q05925 392 aaPredicted RBP9.84□□□□□ -0.83
RDX-215ENST00000533961 CADPS2Q86UW7 1296 aa9.84□□□□□ -0.83
RDX-215ENST00000533961 PDZRN3Q9UPQ7 1066 aa9.84□□□□□ -0.83
RDX-215ENST00000533961 HDGFP51858 240 aaKnown RBP9.82□□□□□ -0.84
RDX-215ENST00000533961 NBR1Q14596 966 aa9.82□□□□□ -0.84
RDX-215ENST00000533961 TSR1Q2NL82 804 aaKnown RBP9.81□□□□□ -0.84
RDX-215ENST00000533961 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
RDX-215ENST00000533961 CDCA7LQ96GN5 454 aa9.81□□□□□ -0.84
RDX-215ENST00000533961 GGCXP38435 758 aa9.8□□□□□ -0.84
RDX-215ENST00000533961 PRSS12P56730 875 aa9.8□□□□□ -0.84
RDX-215ENST00000533961 CERKQ8TCT0 537 aa9.8□□□□□ -0.84
RDX-215ENST00000533961 SMAPO00193 183 aa9.79□□□□□ -0.84
RDX-215ENST00000533961 ZNF516Q92618 1163 aa9.79□□□□□ -0.84
RDX-215ENST00000533961 NBPF26B4DH59 902 aa9.78□□□□□ -0.84
RDX-215ENST00000533961 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
RDX-215ENST00000533961 NECTIN2Q92692 538 aa9.77□□□□□ -0.85
RDX-215ENST00000533961 TATDN2Q93075 761 aa9.77□□□□□ -0.85
RDX-215ENST00000533961 PNMA3Q9UL41 463 aa9.76□□□□□ -0.85
RDX-215ENST00000533961 RNF40O75150 1001 aa9.75□□□□□ -0.85
RDX-215ENST00000533961 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
RDX-215ENST00000533961 PDIA6Q15084 440 aa9.74□□□□□ -0.85
RDX-215ENST00000533961 TMUB1Q9BVT8 246 aa9.74□□□□□ -0.85
RDX-215ENST00000533961 FAM198AQ9UFP1 575 aa9.74□□□□□ -0.85
RDX-215ENST00000533961 APLP1P51693 650 aa9.73□□□□□ -0.85
RDX-215ENST00000533961 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
RDX-215ENST00000533961 C3orf80F5H4A9 247 aa9.69□□□□□ -0.86
RDX-215ENST00000533961 DCAF8L2P0C7V8 631 aa9.69□□□□□ -0.86
RDX-215ENST00000533961 NUDT18Q6ZVK8 323 aa9.69□□□□□ -0.86
RDX-215ENST00000533961 COPS2P61201 443 aa9.67□□□□□ -0.86
RDX-215ENST00000533961 PKDCCQ504Y2 493 aa9.67□□□□□ -0.86
RDX-215ENST00000533961 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
RDX-215ENST00000533961 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
RDX-215ENST00000533961 SLC4A3P48751 1232 aa9.66□□□□□ -0.86
RDX-215ENST00000533961 ZPR1O75312 459 aa9.65□□□□□ -0.86
RDX-215ENST00000533961 DGAT1O75907 488 aa9.65□□□□□ -0.86
RDX-215ENST00000533961 SLC19A1P41440 591 aa9.65□□□□□ -0.86
RDX-215ENST00000533961 GRXCR2A6NFK2 248 aa9.64□□□□□ -0.87
RDX-215ENST00000533961 PRR14Q9BWN1 585 aa9.64□□□□□ -0.87
RDX-215ENST00000533961 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
RDX-215ENST00000533961 PRIM1P49642 420 aaKnown RBP9.62□□□□□ -0.87
RDX-215ENST00000533961 MYT1Q01538 1121 aa9.62□□□□□ -0.87
RDX-215ENST00000533961 SWT1Q5T5J6 900 aaKnown RBP9.62□□□□□ -0.87
RDX-215ENST00000533961 RNF223E7ERA6 249 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 PRR20EP86478 221 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 PRR20CP86479 221 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 PRR20DP86480 221 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 PRR20BP86481 221 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 PRR20AP86496 221 aa9.6□□□□□ -0.87
RDX-215ENST00000533961 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
RDX-215ENST00000533961 SPRYD7Q5W111 196 aa9.59□□□□□ -0.87
RDX-215ENST00000533961 PCDHB3Q9Y5E6 796 aa9.59□□□□□ -0.87
RDX-215ENST00000533961 CDHR5Q9HBB8 845 aa9.58□□□□□ -0.88
RDX-215ENST00000533961 OSBPP22059 807 aa9.57□□□□□ -0.88
RDX-215ENST00000533961 ARIH1Q9Y4X5 557 aaPredicted RBP9.57□□□□□ -0.88
RDX-215ENST00000533961 E2F4Q16254 413 aa9.56□□□□□ -0.88
RDX-215ENST00000533961 ANKLE1Q8NAG6 615 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms