RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 DMRT2Q9Y5R5 561 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 MROH1Q8NDA8 1641 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 PLA2R1Q13018 1463 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 A2ML1A8K2U0 1454 aa16.46■□□□□ 0.23
CLP1-206ENST00000533905 PZPP20742 1482 aa16.44■□□□□ 0.22
CLP1-206ENST00000533905 TNRQ92752 1358 aa16.42■□□□□ 0.22
CLP1-206ENST00000533905 MAST1Q9Y2H9 1570 aa16.42■□□□□ 0.22
CLP1-206ENST00000533905 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
CLP1-206ENST00000533905 ABCC3O15438 1527 aa16.41■□□□□ 0.22
CLP1-206ENST00000533905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.39■□□□□ 0.21
CLP1-206ENST00000533905 MYOM3Q5VTT5 1437 aa16.38■□□□□ 0.21
CLP1-206ENST00000533905 POLR1AO95602 1720 aaPredicted RBP16.38■□□□□ 0.21
CLP1-206ENST00000533905 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
CLP1-206ENST00000533905 IQSEC2Q5JU85 1478 aa16.37■□□□□ 0.21
CLP1-206ENST00000533905 CEP152O94986 1710 aa16.37■□□□□ 0.21
CLP1-206ENST00000533905 VWDEQ8N2E2 1590 aa16.37■□□□□ 0.21
CLP1-206ENST00000533905 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
CLP1-206ENST00000533905 SPATA31D1Q6ZQQ2 1576 aa16.36■□□□□ 0.21
CLP1-206ENST00000533905 PPP6R1Q9UPN7 881 aa16.36■□□□□ 0.21
CLP1-206ENST00000533905 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
CLP1-206ENST00000533905 MIA2Q96PC5 1412 aa16.36■□□□□ 0.21
CLP1-206ENST00000533905 PKD2Q13563 968 aa16.35■□□□□ 0.21
CLP1-206ENST00000533905 ERVK-7P63135 1459 aa16.35■□□□□ 0.21
CLP1-206ENST00000533905 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
CLP1-206ENST00000533905 ABCC5O15440 1437 aa16.34■□□□□ 0.21
CLP1-206ENST00000533905 FAM135AQ9P2D6 1515 aa16.34■□□□□ 0.21
CLP1-206ENST00000533905 CROCC2H7BZ55 1655 aa16.34■□□□□ 0.21
CLP1-206ENST00000533905 STRCP1A6NGW2 1772 aa16.33■□□□□ 0.21
CLP1-206ENST00000533905 UGGT1Q9NYU2 1555 aa16.33■□□□□ 0.2
CLP1-206ENST00000533905 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
CLP1-206ENST00000533905 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
CLP1-206ENST00000533905 PTPN23Q9H3S7 1636 aa16.3■□□□□ 0.2
CLP1-206ENST00000533905 NLRP1Q9C000 1473 aa16.29■□□□□ 0.2
CLP1-206ENST00000533905 SHANK2Q9UPX8 1470 aa16.29■□□□□ 0.2
CLP1-206ENST00000533905 TSPY4P0CV99 314 aa16.29■□□□□ 0.2
CLP1-206ENST00000533905 TSPY10P0CW01 314 aa16.29■□□□□ 0.2
CLP1-206ENST00000533905 ZC3H13Q5T200 1668 aaKnown RBP16.29■□□□□ 0.2
CLP1-206ENST00000533905 PRDM15P57071 1507 aaPredicted RBP16.29■□□□□ 0.2
CLP1-206ENST00000533905 NPHP4O75161 1426 aaPredicted RBP16.28■□□□□ 0.2
CLP1-206ENST00000533905 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
CLP1-206ENST00000533905 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
CLP1-206ENST00000533905 MED14O60244 1454 aa16.28■□□□□ 0.2
CLP1-206ENST00000533905 DAPK1P53355 1430 aa16.28■□□□□ 0.2
CLP1-206ENST00000533905 DUOX2Q9NRD8 1548 aa16.27■□□□□ 0.2
CLP1-206ENST00000533905 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.19
CLP1-206ENST00000533905 DEPDC5O75140 1603 aa16.27■□□□□ 0.19
CLP1-206ENST00000533905 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
CLP1-206ENST00000533905 IQGAP1P46940 1657 aa16.26■□□□□ 0.19
CLP1-206ENST00000533905 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
CLP1-206ENST00000533905 HSPA1LP34931 641 aa16.23■□□□□ 0.19
CLP1-206ENST00000533905 PIP4K2BP78356 416 aa16.23■□□□□ 0.19
CLP1-206ENST00000533905 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
CLP1-206ENST00000533905 CPS1P31327 1500 aa16.23■□□□□ 0.19
CLP1-206ENST00000533905 CFAP65Q6ZU64 1925 aaKnown RBP16.22■□□□□ 0.19
CLP1-206ENST00000533905 LTKP29376 864 aa16.22■□□□□ 0.19
CLP1-206ENST00000533905 SYNMO15061 1565 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 ERBINQ96RT1 1412 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 LRRC7Q96NW7 1537 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 PIK3C2BO00750 1634 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 ANKLE2Q86XL3 938 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
CLP1-206ENST00000533905 THEMISQ8N1K5 641 aaPredicted RBP16.19■□□□□ 0.18
CLP1-206ENST00000533905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.19■□□□□ 0.18
CLP1-206ENST00000533905 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
CLP1-206ENST00000533905 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
CLP1-206ENST00000533905 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
CLP1-206ENST00000533905 SLIT1O75093 1534 aa16.18■□□□□ 0.18
CLP1-206ENST00000533905 MED1Q15648 1581 aaPredicted RBP16.17■□□□□ 0.18
CLP1-206ENST00000533905 SCAF11Q99590 1463 aaKnown RBP16.17■□□□□ 0.18
CLP1-206ENST00000533905 SOCS7O14512 581 aa16.16■□□□□ 0.18
CLP1-206ENST00000533905 XIRP1Q702N8 1843 aaKnown RBP16.16■□□□□ 0.18
CLP1-206ENST00000533905 LMTK2Q8IWU2 1503 aa16.15■□□□□ 0.18
CLP1-206ENST00000533905 EFCAB6Q5THR3 1501 aa16.14■□□□□ 0.17
CLP1-206ENST00000533905 ADGRL2O95490 1459 aa16.13■□□□□ 0.17
CLP1-206ENST00000533905 NOS1P29475 1434 aa16.11■□□□□ 0.17
CLP1-206ENST00000533905 RBM33Q96EV2 1170 aaKnown RBP16.11■□□□□ 0.17
CLP1-206ENST00000533905 IDI1Q13907 227 aa16.1■□□□□ 0.17
CLP1-206ENST00000533905 TMEM2Q9UHN6 1383 aa16.1■□□□□ 0.17
CLP1-206ENST00000533905 TXNDC2Q86VQ3 553 aa16.09■□□□□ 0.17
CLP1-206ENST00000533905 ANKRD30AQ9BXX3 1397 aa16.09■□□□□ 0.17
CLP1-206ENST00000533905 TET3O43151 1660 aa16.08■□□□□ 0.17
CLP1-206ENST00000533905 ADGRB3O60242 1522 aa16.08■□□□□ 0.16
CLP1-206ENST00000533905 TOM1O60784 492 aa16.07■□□□□ 0.16
CLP1-206ENST00000533905 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
CLP1-206ENST00000533905 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
CLP1-206ENST00000533905 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
CLP1-206ENST00000533905 MYO5BQ9ULV0 1848 aa16.04■□□□□ 0.16
CLP1-206ENST00000533905 ANKRD50Q9ULJ7 1429 aa16.03■□□□□ 0.16
CLP1-206ENST00000533905 APLP2Q06481 763 aa16.03■□□□□ 0.16
CLP1-206ENST00000533905 ZFYVE9O95405 1425 aa16.02■□□□□ 0.16
CLP1-206ENST00000533905 KANK1Q14678 1352 aa16.02■□□□□ 0.16
CLP1-206ENST00000533905 UNC13BO14795 1591 aa16.02■□□□□ 0.16
CLP1-206ENST00000533905 GCC2Q8IWJ2 1684 aa16.02■□□□□ 0.15
CLP1-206ENST00000533905 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
CLP1-206ENST00000533905 KDM5AP29375 1690 aaKnown RBP16.01■□□□□ 0.15
CLP1-206ENST00000533905 NWD1Q149M9 1564 aa16■□□□□ 0.15
CLP1-206ENST00000533905 E9PCH4 1651 aa15.99■□□□□ 0.15
CLP1-206ENST00000533905 TMEM131LA2VDJ0 1609 aa15.99■□□□□ 0.15
CLP1-206ENST00000533905 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms