RNA–Protein interactions for RNA: ENST00000533296.5

SAMD3-215, Transcript of sterile alpha motif domain containing 3, humanhuman

TSL 1 (best)

Gene SAMD3, Length 1,436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD3-215ENST00000533296 CFAP43Q8NDM7 1665 aa13.4□□□□□ -0.26
SAMD3-215ENST00000533296 SNPHO15079 494 aa13.4□□□□□ -0.26
SAMD3-215ENST00000533296 FOXK1P85037 733 aa13.4□□□□□ -0.26
SAMD3-215ENST00000533296 CASKIN1Q8WXD9 1431 aa13.4□□□□□ -0.26
SAMD3-215ENST00000533296 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
SAMD3-215ENST00000533296 PDE4AP27815 886 aa13.39□□□□□ -0.27
SAMD3-215ENST00000533296 KANK4Q5T7N3 995 aaPredicted RBP13.39□□□□□ -0.27
SAMD3-215ENST00000533296 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
SAMD3-215ENST00000533296 LRRC9Q6ZRR7 1453 aa13.39□□□□□ -0.27
SAMD3-215ENST00000533296 SAMD9Q5K651 1589 aa13.39□□□□□ -0.27
SAMD3-215ENST00000533296 CCNB3Q8WWL7 1395 aa13.37□□□□□ -0.27
SAMD3-215ENST00000533296 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.37□□□□□ -0.27
SAMD3-215ENST00000533296 THOC2Q8NI27 1593 aaKnown RBP13.36□□□□□ -0.27
SAMD3-215ENST00000533296 WDR62O43379 1518 aa13.36□□□□□ -0.27
SAMD3-215ENST00000533296 DSG2Q14126 1118 aa13.36□□□□□ -0.27
SAMD3-215ENST00000533296 MFSD10Q14728 455 aa13.36□□□□□ -0.27
SAMD3-215ENST00000533296 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
SAMD3-215ENST00000533296 RANGAP1P46060 587 aaPredicted RBP13.35□□□□□ -0.27
SAMD3-215ENST00000533296 LCE2DQ5TA82 110 aaPredicted RBP13.35□□□□□ -0.27
SAMD3-215ENST00000533296 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
SAMD3-215ENST00000533296 PCF11O94913 1555 aaKnown RBP13.33□□□□□ -0.27
SAMD3-215ENST00000533296 IFT140Q96RY7 1462 aa13.33□□□□□ -0.27
SAMD3-215ENST00000533296 TSHZ2Q9NRE2 1034 aa13.33□□□□□ -0.28
SAMD3-215ENST00000533296 DOK7Q18PE1 504 aa13.32□□□□□ -0.28
SAMD3-215ENST00000533296 SNAPC4Q5SXM2 1469 aa13.32□□□□□ -0.28
SAMD3-215ENST00000533296 PBRM1Q86U86 1689 aa13.31□□□□□ -0.28
SAMD3-215ENST00000533296 PLPP6Q8IY26 295 aa13.31□□□□□ -0.28
SAMD3-215ENST00000533296 LARP6Q9BRS8 491 aaKnown RBP13.31□□□□□ -0.28
SAMD3-215ENST00000533296 GRIN2BQ13224 1484 aa13.31□□□□□ -0.28
SAMD3-215ENST00000533296 SLC34A2O95436 690 aa13.3□□□□□ -0.28
SAMD3-215ENST00000533296 ADAMTS12P58397 1594 aa13.3□□□□□ -0.28
SAMD3-215ENST00000533296 ST18O60284 1047 aa13.3□□□□□ -0.28
SAMD3-215ENST00000533296 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
SAMD3-215ENST00000533296 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
SAMD3-215ENST00000533296 DDX27Q96GQ7 796 aaKnown RBP13.29□□□□□ -0.28
SAMD3-215ENST00000533296 FHOD3Q2V2M9 1422 aa13.28□□□□□ -0.28
SAMD3-215ENST00000533296 ZSWIM6Q9HCJ5 1215 aa13.27□□□□□ -0.29
SAMD3-215ENST00000533296 DHX57Q6P158 1386 aaKnown RBP13.26□□□□□ -0.29
SAMD3-215ENST00000533296 UGGT2Q9NYU1 1516 aa13.24□□□□□ -0.29
SAMD3-215ENST00000533296 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
SAMD3-215ENST00000533296 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
SAMD3-215ENST00000533296 GPR153Q6NV75 609 aa13.23□□□□□ -0.29
SAMD3-215ENST00000533296 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
SAMD3-215ENST00000533296 PTCD2Q8WV60 388 aaKnown RBP13.23□□□□□ -0.29
SAMD3-215ENST00000533296 CCDC18Q5T9S5 1454 aa13.23□□□□□ -0.29
SAMD3-215ENST00000533296 HOXB1P14653 301 aaPredicted RBP13.22□□□□□ -0.29
SAMD3-215ENST00000533296 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
SAMD3-215ENST00000533296 CAMK2BQ13554 666 aa13.21□□□□□ -0.3
SAMD3-215ENST00000533296 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
SAMD3-215ENST00000533296 ZNF316A6NFI3 1004 aaPredicted RBP13.2□□□□□ -0.3
SAMD3-215ENST00000533296 ARHGEF11O15085 1522 aa13.19□□□□□ -0.3
SAMD3-215ENST00000533296 EHBP1L1Q8N3D4 1523 aa13.19□□□□□ -0.3
SAMD3-215ENST00000533296 MAGI1Q96QZ7 1491 aaPredicted RBP13.19□□□□□ -0.3
SAMD3-215ENST00000533296 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
SAMD3-215ENST00000533296 OXER1Q8TDS5 423 aa13.18□□□□□ -0.3
SAMD3-215ENST00000533296 PCDHGA4Q9Y5G9 962 aa13.18□□□□□ -0.3
SAMD3-215ENST00000533296 HECW1Q76N89 1606 aa13.16□□□□□ -0.3
SAMD3-215ENST00000533296 HAP1P54257 671 aaPredicted RBP13.16□□□□□ -0.3
SAMD3-215ENST00000533296 FGD6Q6ZV73 1430 aa13.16□□□□□ -0.3
SAMD3-215ENST00000533296 LRRIQ1Q96JM4 1722 aa13.15□□□□□ -0.3
SAMD3-215ENST00000533296 EMILIN3Q9NT22 766 aa13.15□□□□□ -0.3
SAMD3-215ENST00000533296 SUPT6HQ7KZ85 1726 aaKnown RBP13.15□□□□□ -0.3
SAMD3-215ENST00000533296 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
SAMD3-215ENST00000533296 P3H3Q8IVL6 736 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 TIMELESSQ9UNS1 1208 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
SAMD3-215ENST00000533296 EIF4G3O43432 1585 aaKnown RBP13.14□□□□□ -0.31
SAMD3-215ENST00000533296 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
SAMD3-215ENST00000533296 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
SAMD3-215ENST00000533296 MYOM3Q5VTT5 1437 aa13.13□□□□□ -0.31
SAMD3-215ENST00000533296 WDR70Q9NW82 654 aa13.13□□□□□ -0.31
SAMD3-215ENST00000533296 ACIN1Q9UKV3 1341 aaKnown RBP13.11□□□□□ -0.31
SAMD3-215ENST00000533296 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
SAMD3-215ENST00000533296 NCOA2Q15596 1464 aa13.11□□□□□ -0.31
SAMD3-215ENST00000533296 KHSRPQ92945 711 aaKnown RBP eCLIP13.11□□□□□ -0.31
SAMD3-215ENST00000533296 SYNJ2O15056 1496 aa13.1□□□□□ -0.31
SAMD3-215ENST00000533296 TCOF1Q13428 1488 aaKnown RBP13.1□□□□□ -0.31
SAMD3-215ENST00000533296 MARVELD3Q96A59 401 aa13.1□□□□□ -0.31
SAMD3-215ENST00000533296 EPRSP07814 1512 aaKnown RBP13.1□□□□□ -0.31
SAMD3-215ENST00000533296 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
SAMD3-215ENST00000533296 KIAA0556O60303 1618 aa13.09□□□□□ -0.31
SAMD3-215ENST00000533296 TBC1D12O60347 775 aa13.09□□□□□ -0.31
SAMD3-215ENST00000533296 E2F4Q16254 413 aa13.09□□□□□ -0.31
SAMD3-215ENST00000533296 HFM1A2PYH4 1435 aa13.09□□□□□ -0.31
SAMD3-215ENST00000533296 AKNAQ7Z591 1439 aa13.09□□□□□ -0.31
SAMD3-215ENST00000533296 MAPKBP1O60336 1514 aa13.08□□□□□ -0.31
SAMD3-215ENST00000533296 DISP1Q96F81 1524 aa13.08□□□□□ -0.31
SAMD3-215ENST00000533296 POTEMA6NI47 508 aa13.08□□□□□ -0.32
SAMD3-215ENST00000533296 POTEGQ6S5H5 508 aa13.08□□□□□ -0.32
SAMD3-215ENST00000533296 NUP160Q12769 1436 aa13.07□□□□□ -0.32
SAMD3-215ENST00000533296 UPF1Q92900 1129 aaKnown RBP eCLIP13.07□□□□□ -0.32
SAMD3-215ENST00000533296 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
SAMD3-215ENST00000533296 NUDT7P0C024 238 aa13.06□□□□□ -0.32
SAMD3-215ENST00000533296 EMP3P54852 163 aa13.06□□□□□ -0.32
SAMD3-215ENST00000533296 KDM2AQ9Y2K7 1162 aa13.06□□□□□ -0.32
SAMD3-215ENST00000533296 VSIG10Q8N0Z9 540 aa13.05□□□□□ -0.32
SAMD3-215ENST00000533296 MAGI3Q5TCQ9 1506 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms