RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 NPM1P06748 294 aaKnown RBP eCLIP20.06■□□□□ 0.8
CAPN1-224ENST00000533129 ABCC1P33527 1531 aa20.04■□□□□ 0.8
CAPN1-224ENST00000533129 KIF7Q2M1P5 1343 aa20.04■□□□□ 0.8
CAPN1-224ENST00000533129 RNF123Q5XPI4 1314 aa20.04■□□□□ 0.8
CAPN1-224ENST00000533129 ANKRD30BQ9BXX2 1392 aa20.03■□□□□ 0.8
CAPN1-224ENST00000533129 KIF15Q9NS87 1388 aa20.03■□□□□ 0.8
CAPN1-224ENST00000533129 ARHGEF12Q9NZN5 1544 aa20.01■□□□□ 0.79
CAPN1-224ENST00000533129 NBPF8Q3BBV2 869 aa20■□□□□ 0.79
CAPN1-224ENST00000533129 PLXNC1O60486 1568 aa20■□□□□ 0.79
CAPN1-224ENST00000533129 NUDCQ9Y266 331 aa20■□□□□ 0.79
CAPN1-224ENST00000533129 PAK3O75914 559 aaPredicted RBP19.99■□□□□ 0.79
CAPN1-224ENST00000533129 PZPP20742 1482 aa19.99■□□□□ 0.79
CAPN1-224ENST00000533129 ANP32AP39687 249 aaKnown RBP19.97■□□□□ 0.79
CAPN1-224ENST00000533129 KDM5DQ9BY66 1539 aa19.96■□□□□ 0.79
CAPN1-224ENST00000533129 FANCAO15360 1455 aa19.96■□□□□ 0.79
CAPN1-224ENST00000533129 DHX29Q7Z478 1369 aaKnown RBP19.96■□□□□ 0.79
CAPN1-224ENST00000533129 IPO9Q96P70 1041 aaKnown RBP19.96■□□□□ 0.79
CAPN1-224ENST00000533129 SLC4A1APQ9BWU0 796 aaKnown RBP19.96■□□□□ 0.79
CAPN1-224ENST00000533129 FOXD1Q16676 465 aa19.95■□□□□ 0.78
CAPN1-224ENST00000533129 CCDC136Q96JN2 1154 aa19.95■□□□□ 0.78
CAPN1-224ENST00000533129 NBR1Q14596 966 aa19.94■□□□□ 0.78
CAPN1-224ENST00000533129 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
CAPN1-224ENST00000533129 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
CAPN1-224ENST00000533129 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
CAPN1-224ENST00000533129 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
CAPN1-224ENST00000533129 DUOX2Q9NRD8 1548 aa19.91■□□□□ 0.78
CAPN1-224ENST00000533129 RTEL1-TNFRSF6BF6WH68 1400 aa19.9■□□□□ 0.78
CAPN1-224ENST00000533129 BCORL1Q5H9F3 1711 aa19.89■□□□□ 0.78
CAPN1-224ENST00000533129 NUP155O75694 1391 aa19.89■□□□□ 0.77
CAPN1-224ENST00000533129 ADGRL1O94910 1474 aa19.88■□□□□ 0.77
CAPN1-224ENST00000533129 CFAP74Q9C0B2 1584 aa19.88■□□□□ 0.77
CAPN1-224ENST00000533129 ARID4BQ4LE39 1312 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-224ENST00000533129 ERBINQ96RT1 1412 aa19.88■□□□□ 0.77
CAPN1-224ENST00000533129 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CAPN1-224ENST00000533129 UNC13BO14795 1591 aa19.87■□□□□ 0.77
CAPN1-224ENST00000533129 ZFYVE16Q7Z3T8 1539 aa19.87■□□□□ 0.77
CAPN1-224ENST00000533129 RTL5Q5HYW3 569 aaPredicted RBP19.86■□□□□ 0.77
CAPN1-224ENST00000533129 CD109Q6YHK3 1445 aa19.86■□□□□ 0.77
CAPN1-224ENST00000533129 SPAG9O60271 1321 aaKnown RBP19.86■□□□□ 0.77
CAPN1-224ENST00000533129 KDM5CP41229 1560 aa19.85■□□□□ 0.77
CAPN1-224ENST00000533129 SCAPERQ9BY12 1400 aa19.84■□□□□ 0.77
CAPN1-224ENST00000533129 INO80Q9ULG1 1556 aaPredicted RBP19.84■□□□□ 0.77
CAPN1-224ENST00000533129 PKD2Q13563 968 aa19.83■□□□□ 0.77
CAPN1-224ENST00000533129 CYB5RLQ6IPT4 315 aa19.83■□□□□ 0.77
CAPN1-224ENST00000533129 USP47Q96K76 1375 aa19.83■□□□□ 0.77
CAPN1-224ENST00000533129 FAM135AQ9P2D6 1515 aa19.82■□□□□ 0.76
CAPN1-224ENST00000533129 AFAP1Q8N556 730 aa19.82■□□□□ 0.76
CAPN1-224ENST00000533129 ROCK2O75116 1388 aaKnown RBP19.82■□□□□ 0.76
CAPN1-224ENST00000533129 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
CAPN1-224ENST00000533129 PNISRQ8TF01 805 aaKnown RBP19.81■□□□□ 0.76
CAPN1-224ENST00000533129 MAGI2Q86UL8 1455 aa19.81■□□□□ 0.76
CAPN1-224ENST00000533129 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
CAPN1-224ENST00000533129 LRPPRCP42704 1394 aaKnown RBP19.78■□□□□ 0.76
CAPN1-224ENST00000533129 ZNF518AQ6AHZ1 1483 aa19.78■□□□□ 0.76
CAPN1-224ENST00000533129 GLI2P10070 1586 aa19.77■□□□□ 0.75
CAPN1-224ENST00000533129 NEO1Q92859 1461 aa19.76■□□□□ 0.75
CAPN1-224ENST00000533129 KTN1Q86UP2 1357 aaKnown RBP19.75■□□□□ 0.75
CAPN1-224ENST00000533129 MAP3K4Q9Y6R4 1608 aa19.74■□□□□ 0.75
CAPN1-224ENST00000533129 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
CAPN1-224ENST00000533129 TCERG1O14776 1098 aaKnown RBP19.74■□□□□ 0.75
CAPN1-224ENST00000533129 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
CAPN1-224ENST00000533129 POGZQ7Z3K3 1410 aa19.74■□□□□ 0.75
CAPN1-224ENST00000533129 RALGAPBQ86X10 1494 aa19.73■□□□□ 0.75
CAPN1-224ENST00000533129 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
CAPN1-224ENST00000533129 BRD4O60885 1362 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-224ENST00000533129 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
CAPN1-224ENST00000533129 EIF2AK4Q9P2K8 1649 aaKnown RBP19.71■□□□□ 0.75
CAPN1-224ENST00000533129 E9PCH4 1651 aa19.71■□□□□ 0.75
CAPN1-224ENST00000533129 DEPDC5O75140 1603 aa19.7■□□□□ 0.74
CAPN1-224ENST00000533129 KIDINS220Q9ULH0 1771 aa19.7■□□□□ 0.74
CAPN1-224ENST00000533129 USP35Q9P2H5 1018 aa19.7■□□□□ 0.74
CAPN1-224ENST00000533129 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.744e-6■■□□□ 13.3
CAPN1-224ENST00000533129 POLR3GLQ9BT43 218 aa19.7■□□□□ 0.74
CAPN1-224ENST00000533129 MLH3Q9UHC1 1453 aa19.68■□□□□ 0.74
CAPN1-224ENST00000533129 MYBBP1AQ9BQG0 1328 aaKnown RBP19.68■□□□□ 0.74
CAPN1-224ENST00000533129 MS4A1P11836 297 aa19.68■□□□□ 0.74
CAPN1-224ENST00000533129 CNGB1Q14028 1251 aaPredicted RBP19.68■□□□□ 0.74
CAPN1-224ENST00000533129 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
CAPN1-224ENST00000533129 HECW2Q9P2P5 1572 aa19.67■□□□□ 0.74
CAPN1-224ENST00000533129 RALBP1Q15311 655 aa19.66■□□□□ 0.74
CAPN1-224ENST00000533129 PDE4AP27815 886 aa19.65■□□□□ 0.74
CAPN1-224ENST00000533129 EXOC6Q8TAG9 804 aa19.65■□□□□ 0.74
CAPN1-224ENST00000533129 ATP10AO60312 1499 aa19.64■□□□□ 0.73
CAPN1-224ENST00000533129 ZNF326Q5BKZ1 582 aaKnown RBP19.64■□□□□ 0.73
CAPN1-224ENST00000533129 BACH2Q9BYV9 841 aa19.64■□□□□ 0.73
CAPN1-224ENST00000533129 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.73
CAPN1-224ENST00000533129 CCDC144AA2RUR9 1427 aa19.63■□□□□ 0.73
CAPN1-224ENST00000533129 PDE3BQ13370 1112 aa19.63■□□□□ 0.73
CAPN1-224ENST00000533129 VWDEQ8N2E2 1590 aa19.63■□□□□ 0.73
CAPN1-224ENST00000533129 PRDM15P57071 1507 aaPredicted RBP19.63■□□□□ 0.73
CAPN1-224ENST00000533129 A2MP01023 1474 aa19.62■□□□□ 0.73
CAPN1-224ENST00000533129 KANK1Q14678 1352 aa19.62■□□□□ 0.73
CAPN1-224ENST00000533129 NPM2Q86SE8 214 aaKnown RBP19.61■□□□□ 0.73
CAPN1-224ENST00000533129 PLA2R1Q13018 1463 aa19.61■□□□□ 0.73
CAPN1-224ENST00000533129 PPM1GO15355 546 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-224ENST00000533129 PRKCSHP14314 528 aaPredicted RBP19.6■□□□□ 0.73
CAPN1-224ENST00000533129 TET3O43151 1660 aa19.6■□□□□ 0.73
CAPN1-224ENST00000533129 SENP3-EIF4A1A0A087X0R7 540 aa19.6■□□□□ 0.73
CAPN1-224ENST00000533129 FAM69CQ0P6D2 419 aa19.6■□□□□ 0.73
CAPN1-224ENST00000533129 DAXXQ9UER7 740 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms