RNA–Protein interactions for RNA: ENST00000532330.5

BRPF3-209, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5

Gene BRPF3, Length 4,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-209ENST00000532330 CD109Q6YHK3 1445 aa15.3■□□□□ 0.04
BRPF3-209ENST00000532330 TRAPPC8Q9Y2L5 1435 aa15.29■□□□□ 0.04
BRPF3-209ENST00000532330 INO80Q9ULG1 1556 aaPredicted RBP15.29■□□□□ 0.04
BRPF3-209ENST00000532330 DHX29Q7Z478 1369 aaKnown RBP15.29■□□□□ 0.04
BRPF3-209ENST00000532330 FOXD1Q16676 465 aa15.28■□□□□ 0.04
BRPF3-209ENST00000532330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.037e-7■□□□□ 9.8
BRPF3-209ENST00000532330 NEURL4Q96JN8 1562 aa15.25■□□□□ 0.03
BRPF3-209ENST00000532330 MLH3Q9UHC1 1453 aa15.25■□□□□ 0.03
BRPF3-209ENST00000532330 CNTLNQ9NXG0 1405 aa15.24■□□□□ 0.03
BRPF3-209ENST00000532330 GLI2P10070 1586 aa15.24■□□□□ 0.03
BRPF3-209ENST00000532330 DEPDC5O75140 1603 aa15.24■□□□□ 0.03
BRPF3-209ENST00000532330 TET3O43151 1660 aa15.23■□□□□ 0.03
BRPF3-209ENST00000532330 CCDC7Q96M83 1385 aa15.23■□□□□ 0.03
BRPF3-209ENST00000532330 POGZQ7Z3K3 1410 aa15.22■□□□□ 0.03
BRPF3-209ENST00000532330 USP47Q96K76 1375 aa15.22■□□□□ 0.03
BRPF3-209ENST00000532330 YTHDC1Q96MU7 727 aaKnown RBP15.21■□□□□ 0.03
BRPF3-209ENST00000532330 CARD11Q9BXL7 1154 aa15.21■□□□□ 0.03
BRPF3-209ENST00000532330 LAMC1P11047 1609 aa15.21■□□□□ 0.03
BRPF3-209ENST00000532330 POLR1AO95602 1720 aaPredicted RBP15.21■□□□□ 0.03
BRPF3-209ENST00000532330 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.02
BRPF3-209ENST00000532330 KTN1Q86UP2 1357 aaKnown RBP15.2■□□□□ 0.02
BRPF3-209ENST00000532330 TRPM2O94759 1503 aa15.2■□□□□ 0.02
BRPF3-209ENST00000532330 LMTK2Q8IWU2 1503 aa15.2■□□□□ 0.02
BRPF3-209ENST00000532330 A2MP01023 1474 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 DCAF11Q8TEB1 546 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 PRDM15P57071 1507 aaPredicted RBP15.19■□□□□ 0.02
BRPF3-209ENST00000532330 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 KDM5CP41229 1560 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 NBPF8Q3BBV2 869 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
BRPF3-209ENST00000532330 PTPRTO14522 1441 aa15.18■□□□□ 0.02
BRPF3-209ENST00000532330 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
BRPF3-209ENST00000532330 VWDEQ8N2E2 1590 aa15.18■□□□□ 0.02
BRPF3-209ENST00000532330 CDCA8Q53HL2 280 aa15.18■□□□□ 0.02
BRPF3-209ENST00000532330 ZNF326Q5BKZ1 582 aaKnown RBP15.17■□□□□ 0.02
BRPF3-209ENST00000532330 KIF3BO15066 747 aa15.16■□□□□ 0.02
BRPF3-209ENST00000532330 GPRASP1Q5JY77 1395 aa15.16■□□□□ 0.02
BRPF3-209ENST00000532330 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
BRPF3-209ENST00000532330 BCORL1Q5H9F3 1711 aa15.15■□□□□ 0.02
BRPF3-209ENST00000532330 RNF17Q9BXT8 1623 aaKnown RBP15.15■□□□□ 0.02
BRPF3-209ENST00000532330 EIF3AQ14152 1382 aaKnown RBP15.15■□□□□ 0.02
BRPF3-209ENST00000532330 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
BRPF3-209ENST00000532330 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
BRPF3-209ENST00000532330 SPHKAPQ2M3C7 1700 aa15.12■□□□□ 0.01
BRPF3-209ENST00000532330 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
BRPF3-209ENST00000532330 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
BRPF3-209ENST00000532330 PLA2R1Q13018 1463 aa15.11■□□□□ 0.01
BRPF3-209ENST00000532330 KIF7Q2M1P5 1343 aa15.1■□□□□ 0.01
BRPF3-209ENST00000532330 MAP3K4Q9Y6R4 1608 aa15.1■□□□□ 0.01
BRPF3-209ENST00000532330 KIDINS220Q9ULH0 1771 aa15.1■□□□□ 0.01
BRPF3-209ENST00000532330 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
BRPF3-209ENST00000532330 EFCAB6Q5THR3 1501 aa15.09■□□□□ 0.01
BRPF3-209ENST00000532330 CEP152O94986 1710 aa15.09■□□□□ 0.01
BRPF3-209ENST00000532330 HIRIP3Q9BW71 556 aaPredicted RBP15.09■□□□□ 0.01
BRPF3-209ENST00000532330 TRPM1Q7Z4N2 1603 aa15.09■□□□□ 0.01
BRPF3-209ENST00000532330 E9PCH4 1651 aa15.09■□□□□ 0.01
BRPF3-209ENST00000532330 TMF1P82094 1093 aa15.07■□□□□ 0
BRPF3-209ENST00000532330 ZC3H13Q5T200 1668 aaKnown RBP15.07■□□□□ 0
BRPF3-209ENST00000532330 GTF3C3Q9Y5Q9 886 aa15.07■□□□□ 0
BRPF3-209ENST00000532330 MYOM2P54296 1465 aa15.07■□□□□ 0
BRPF3-209ENST00000532330 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
BRPF3-209ENST00000532330 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
BRPF3-209ENST00000532330 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
BRPF3-209ENST00000532330 KIAA1210Q9ULL0 1709 aa15.06■□□□□ 0
BRPF3-209ENST00000532330 RALBP1Q15311 655 aa15.06■□□□□ 0
BRPF3-209ENST00000532330 RGL3Q3MIN7 710 aa15.05■□□□□ 0
BRPF3-209ENST00000532330 NEFLP07196 543 aa15.05■□□□□ -0
BRPF3-209ENST00000532330 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ -0
BRPF3-209ENST00000532330 ZMYM4Q5VZL5 1548 aa15.05■□□□□ -0
BRPF3-209ENST00000532330 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
BRPF3-209ENST00000532330 ARHGAP31Q2M1Z3 1444 aa15.04■□□□□ -0
BRPF3-209ENST00000532330 PRKRIP1Q9H875 184 aaPredicted RBP15.03■□□□□ -0
BRPF3-209ENST00000532330 KIF1BO60333 1816 aa15.02■□□□□ -0
BRPF3-209ENST00000532330 SCAF11Q99590 1463 aaKnown RBP15.01□□□□□ -0.01
BRPF3-209ENST00000532330 REREQ9P2R6 1566 aa15.01□□□□□ -0.01
BRPF3-209ENST00000532330 MROH1Q8NDA8 1641 aa15.01□□□□□ -0.01
BRPF3-209ENST00000532330 ST20-MTHFSA0A0A6YYL1 179 aa15□□□□□ -0.01
BRPF3-209ENST00000532330 CLTCL1P53675 1640 aa14.99□□□□□ -0.01
BRPF3-209ENST00000532330 FAM69CQ0P6D2 419 aa14.99□□□□□ -0.01
BRPF3-209ENST00000532330 SLC52A1Q9NWF4 448 aa14.99□□□□□ -0.01
BRPF3-209ENST00000532330 DIP2CQ9Y2E4 1556 aa14.98□□□□□ -0.01
BRPF3-209ENST00000532330 MADDQ8WXG6 1647 aa14.98□□□□□ -0.01
BRPF3-209ENST00000532330 DIP2BQ9P265 1576 aa14.98□□□□□ -0.01
BRPF3-209ENST00000532330 ABCC3O15438 1527 aa14.98□□□□□ -0.01
BRPF3-209ENST00000532330 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
BRPF3-209ENST00000532330 AGLP35573 1532 aa14.97□□□□□ -0.01
BRPF3-209ENST00000532330 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
BRPF3-209ENST00000532330 RICTORQ6R327 1708 aa14.97□□□□□ -0.01
BRPF3-209ENST00000532330 POLR3GLQ9BT43 218 aa14.97□□□□□ -0.01
BRPF3-209ENST00000532330 MRS2Q9HD23 443 aa14.97□□□□□ -0.01
BRPF3-209ENST00000532330 GGT6Q6P531 493 aa14.96□□□□□ -0.01
BRPF3-209ENST00000532330 PPRC1Q5VV67 1664 aaKnown RBP14.96□□□□□ -0.02
BRPF3-209ENST00000532330 VGFO15240 615 aaPredicted RBP14.95□□□□□ -0.02
BRPF3-209ENST00000532330 ADGRB3O60242 1522 aa14.94□□□□□ -0.02
BRPF3-209ENST00000532330 BRD4O60885 1362 aaPredicted RBP14.94□□□□□ -0.02
BRPF3-209ENST00000532330 FRMPD1Q5SYB0 1578 aa14.94□□□□□ -0.02
BRPF3-209ENST00000532330 CAMSAP1Q5T5Y3 1602 aa14.94□□□□□ -0.02
BRPF3-209ENST00000532330 SETBP1Q9Y6X0 1596 aa14.93□□□□□ -0.02
BRPF3-209ENST00000532330 MYBBP1AQ9BQG0 1328 aaKnown RBP14.93□□□□□ -0.02
BRPF3-209ENST00000532330 INSRP06213 1382 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms