RNA–Protein interactions for RNA: ENST00000532297.5

NXF1-213, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NXF1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-213ENST00000532297 KIF15Q9NS87 1388 aa19.94■□□□□ 0.78
NXF1-213ENST00000532297 NUP160Q12769 1436 aa19.94■□□□□ 0.78
NXF1-213ENST00000532297 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
NXF1-213ENST00000532297 RTN4Q9NQC3 1192 aaKnown RBP19.93■□□□□ 0.78
NXF1-213ENST00000532297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.92■□□□□ 0.781e-7■■■□□ 16.1
NXF1-213ENST00000532297 TSPY4P0CV99 314 aa19.91■□□□□ 0.78
NXF1-213ENST00000532297 TSPY10P0CW01 314 aa19.91■□□□□ 0.78
NXF1-213ENST00000532297 RALGAPBQ86X10 1494 aa19.9■□□□□ 0.78
NXF1-213ENST00000532297 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
NXF1-213ENST00000532297 TMC1Q8TDI8 760 aa19.89■□□□□ 0.77
NXF1-213ENST00000532297 NBPF1Q3BBV0 1214 aa19.87■□□□□ 0.77
NXF1-213ENST00000532297 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
NXF1-213ENST00000532297 SAMD9LQ8IVG5 1584 aa19.87■□□□□ 0.77
NXF1-213ENST00000532297 ROCK2O75116 1388 aaKnown RBP19.86■□□□□ 0.77
NXF1-213ENST00000532297 NEFMP07197 916 aa19.85■□□□□ 0.77
NXF1-213ENST00000532297 LAS1LQ9Y4W2 734 aaKnown RBP19.85■□□□□ 0.77
NXF1-213ENST00000532297 CDC42BPBQ9Y5S2 1711 aa19.85■□□□□ 0.77
NXF1-213ENST00000532297 UHRF1BP1Q6BDS2 1440 aa19.84■□□□□ 0.77
NXF1-213ENST00000532297 ARID4BQ4LE39 1312 aaPredicted RBP19.84■□□□□ 0.77
NXF1-213ENST00000532297 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.77
NXF1-213ENST00000532297 SYCP2Q9BX26 1530 aa19.82■□□□□ 0.76
NXF1-213ENST00000532297 FAM135AQ9P2D6 1515 aa19.82■□□□□ 0.76
NXF1-213ENST00000532297 USP35Q9P2H5 1018 aa19.81■□□□□ 0.76
NXF1-213ENST00000532297 KDM5DQ9BY66 1539 aa19.8■□□□□ 0.76
NXF1-213ENST00000532297 PTPRGP23470 1445 aa19.8■□□□□ 0.76
NXF1-213ENST00000532297 TTC37Q6PGP7 1564 aa19.79■□□□□ 0.76
NXF1-213ENST00000532297 ARHGEF12Q9NZN5 1544 aa19.78■□□□□ 0.76
NXF1-213ENST00000532297 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
NXF1-213ENST00000532297 CC2D1BQ5T0F9 858 aaKnown RBP19.78■□□□□ 0.76
NXF1-213ENST00000532297 CCDC141Q6ZP82 1450 aa19.77■□□□□ 0.76
NXF1-213ENST00000532297 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.77■□□□□ 0.76
NXF1-213ENST00000532297 E9PCH4 1651 aa19.76■□□□□ 0.75
NXF1-213ENST00000532297 PDE4AP27815 886 aa19.76■□□□□ 0.75
NXF1-213ENST00000532297 ERCC6L2Q5T890 1561 aa19.76■□□□□ 0.75
NXF1-213ENST00000532297 PREX2Q70Z35 1606 aa19.76■□□□□ 0.75
NXF1-213ENST00000532297 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
NXF1-213ENST00000532297 CCDC144AA2RUR9 1427 aa19.74■□□□□ 0.75
NXF1-213ENST00000532297 ARHGAP5Q13017 1502 aa19.74■□□□□ 0.75
NXF1-213ENST00000532297 PLA2R1Q13018 1463 aa19.74■□□□□ 0.75
NXF1-213ENST00000532297 TRPM1Q7Z4N2 1603 aa19.74■□□□□ 0.75
NXF1-213ENST00000532297 ARHGEF5Q12774 1597 aa19.74■□□□□ 0.75
NXF1-213ENST00000532297 DISP3Q9P2K9 1392 aa19.73■□□□□ 0.75
NXF1-213ENST00000532297 EXOC6Q8TAG9 804 aa19.73■□□□□ 0.75
NXF1-213ENST00000532297 PRAG1Q86YV5 1406 aa19.73■□□□□ 0.75
NXF1-213ENST00000532297 PPM1GO15355 546 aaPredicted RBP19.73■□□□□ 0.75
NXF1-213ENST00000532297 WASHC2CQ9Y4E1 1318 aa19.72■□□□□ 0.75
NXF1-213ENST00000532297 RRP1P56182 461 aaKnown RBP19.72■□□□□ 0.75
NXF1-213ENST00000532297 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
NXF1-213ENST00000532297 A2MP01023 1474 aa19.72■□□□□ 0.75
NXF1-213ENST00000532297 PLEKHH2Q8IVE3 1493 aa19.72■□□□□ 0.75
NXF1-213ENST00000532297 BACH2Q9BYV9 841 aa19.72■□□□□ 0.75
NXF1-213ENST00000532297 CHD1O14646 1710 aa19.71■□□□□ 0.75
NXF1-213ENST00000532297 LRPPRCP42704 1394 aaKnown RBP19.71■□□□□ 0.75
NXF1-213ENST00000532297 MYO5CQ9NQX4 1742 aa19.7■□□□□ 0.74
NXF1-213ENST00000532297 SKAP1Q86WV1 359 aa19.69■□□□□ 0.74
NXF1-213ENST00000532297 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.69■□□□□ 0.74
NXF1-213ENST00000532297 BRD4O60885 1362 aaPredicted RBP19.67■□□□□ 0.74
NXF1-213ENST00000532297 PLIN1O60240 522 aa19.66■□□□□ 0.74
NXF1-213ENST00000532297 MS4A1P11836 297 aa19.66■□□□□ 0.74
NXF1-213ENST00000532297 RALBP1Q15311 655 aa19.66■□□□□ 0.74
NXF1-213ENST00000532297 KTN1Q86UP2 1357 aaKnown RBP19.65■□□□□ 0.74
NXF1-213ENST00000532297 RCAN3Q9UKA8 241 aa19.65■□□□□ 0.74
NXF1-213ENST00000532297 PANK3Q9H999 370 aa19.64■□□□□ 0.73
NXF1-213ENST00000532297 BRPF3Q9ULD4 1205 aa19.64■□□□□ 0.73
NXF1-213ENST00000532297 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
NXF1-213ENST00000532297 TESK2Q96S53 571 aa19.64■□□□□ 0.73
NXF1-213ENST00000532297 PARD3Q8TEW0 1356 aa19.63■□□□□ 0.73
NXF1-213ENST00000532297 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
NXF1-213ENST00000532297 UNC13BO14795 1591 aa19.62■□□□□ 0.73
NXF1-213ENST00000532297 GSE1Q14687 1217 aa19.61■□□□□ 0.73
NXF1-213ENST00000532297 COL17A1Q9UMD9 1497 aaPredicted RBP19.61■□□□□ 0.73
NXF1-213ENST00000532297 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
NXF1-213ENST00000532297 RSPH4AQ5TD94 716 aa19.59■□□□□ 0.73
NXF1-213ENST00000532297 ERBINQ96RT1 1412 aa19.58■□□□□ 0.72
NXF1-213ENST00000532297 PRDM15P57071 1507 aaPredicted RBP19.57■□□□□ 0.72
NXF1-213ENST00000532297 IQGAP3Q86VI3 1631 aa19.56■□□□□ 0.72
NXF1-213ENST00000532297 NFKBIBQ15653 356 aa19.55■□□□□ 0.72
NXF1-213ENST00000532297 TRAPPC8Q9Y2L5 1435 aa19.54■□□□□ 0.72
NXF1-213ENST00000532297 GPRASP1Q5JY77 1395 aa19.53■□□□□ 0.72
NXF1-213ENST00000532297 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
NXF1-213ENST00000532297 MAST1Q9Y2H9 1570 aa19.52■□□□□ 0.72
NXF1-213ENST00000532297 AFAP1Q8N556 730 aa19.52■□□□□ 0.72
NXF1-213ENST00000532297 FRAT1Q92837 279 aaPredicted RBP19.52■□□□□ 0.72
NXF1-213ENST00000532297 SLC4A3P48751 1232 aa19.51■□□□□ 0.71
NXF1-213ENST00000532297 C20orf194Q5TEA3 1177 aa19.51■□□□□ 0.71
NXF1-213ENST00000532297 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
NXF1-213ENST00000532297 EIF5BO60841 1220 aaKnown RBP19.5■□□□□ 0.71
NXF1-213ENST00000532297 ABCC2Q92887 1545 aa19.5■□□□□ 0.71
NXF1-213ENST00000532297 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
NXF1-213ENST00000532297 MAGI2Q86UL8 1455 aa19.5■□□□□ 0.71
NXF1-213ENST00000532297 TMF1P82094 1093 aa19.49■□□□□ 0.71
NXF1-213ENST00000532297 DAXXQ9UER7 740 aaPredicted RBP19.49■□□□□ 0.71
NXF1-213ENST00000532297 ADAMTS8Q9UP79 889 aa19.49■□□□□ 0.71
NXF1-213ENST00000532297 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
NXF1-213ENST00000532297 DUOX2Q9NRD8 1548 aa19.48■□□□□ 0.71
NXF1-213ENST00000532297 ZCCHC11Q5TAX3 1644 aaKnown RBP19.47■□□□□ 0.71
NXF1-213ENST00000532297 SHROOM2Q13796 1616 aa19.47■□□□□ 0.71
NXF1-213ENST00000532297 RNF17Q9BXT8 1623 aaKnown RBP19.45■□□□□ 0.7
NXF1-213ENST00000532297 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
NXF1-213ENST00000532297 CCDC146Q8IYE0 955 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms