RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
NPIPA3-202ENST00000531598 DHX29Q7Z478 1369 aaKnown RBP13.65□□□□□ -0.22
NPIPA3-202ENST00000531598 MLH3Q9UHC1 1453 aa13.64□□□□□ -0.23
NPIPA3-202ENST00000531598 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
NPIPA3-202ENST00000531598 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
NPIPA3-202ENST00000531598 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
NPIPA3-202ENST00000531598 POGZQ7Z3K3 1410 aa13.63□□□□□ -0.23
NPIPA3-202ENST00000531598 AFAP1Q8N556 730 aa13.62□□□□□ -0.23
NPIPA3-202ENST00000531598 KDM5CP41229 1560 aa13.62□□□□□ -0.23
NPIPA3-202ENST00000531598 DEPDC5O75140 1603 aa13.61□□□□□ -0.23
NPIPA3-202ENST00000531598 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
NPIPA3-202ENST00000531598 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
NPIPA3-202ENST00000531598 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
NPIPA3-202ENST00000531598 MYT1LQ9UL68 1186 aa13.59□□□□□ -0.23
NPIPA3-202ENST00000531598 ARID4BQ4LE39 1312 aaPredicted RBP13.58□□□□□ -0.24
NPIPA3-202ENST00000531598 CYB5RLQ6IPT4 315 aa13.57□□□□□ -0.24
NPIPA3-202ENST00000531598 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.57□□□□□ -0.24
NPIPA3-202ENST00000531598 PRDM15P57071 1507 aaPredicted RBP13.57□□□□□ -0.24
NPIPA3-202ENST00000531598 VWDEQ8N2E2 1590 aa13.57□□□□□ -0.24
NPIPA3-202ENST00000531598 A2MP01023 1474 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 LMTK2Q8IWU2 1503 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 MIER1Q8N108 512 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 NEURL4Q96JN8 1562 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 HECW2Q9P2P5 1572 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 MAP3K4Q9Y6R4 1608 aa13.56□□□□□ -0.24
NPIPA3-202ENST00000531598 PTPRTO14522 1441 aa13.55□□□□□ -0.24
NPIPA3-202ENST00000531598 TET3O43151 1660 aa13.54□□□□□ -0.24
NPIPA3-202ENST00000531598 BCORL1Q5H9F3 1711 aa13.53□□□□□ -0.24
NPIPA3-202ENST00000531598 HSPA5P11021 654 aaKnown RBP13.53□□□□□ -0.24
NPIPA3-202ENST00000531598 TRPM2O94759 1503 aa13.53□□□□□ -0.24
NPIPA3-202ENST00000531598 RNF17Q9BXT8 1623 aaKnown RBP13.53□□□□□ -0.24
NPIPA3-202ENST00000531598 KIF3BO15066 747 aa13.52□□□□□ -0.25
NPIPA3-202ENST00000531598 KIDINS220Q9ULH0 1771 aa13.52□□□□□ -0.25
NPIPA3-202ENST00000531598 PLA2R1Q13018 1463 aa13.51□□□□□ -0.25
NPIPA3-202ENST00000531598 SPATA31E1Q6ZUB1 1445 aa13.51□□□□□ -0.25
NPIPA3-202ENST00000531598 ANP32CO43423 234 aa13.51□□□□□ -0.25
NPIPA3-202ENST00000531598 NBPF8Q3BBV2 869 aa13.51□□□□□ -0.25
NPIPA3-202ENST00000531598 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
NPIPA3-202ENST00000531598 ROCK2O75116 1388 aaKnown RBP13.49□□□□□ -0.25
NPIPA3-202ENST00000531598 DDX10Q13206 875 aaKnown RBP13.49□□□□□ -0.25
NPIPA3-202ENST00000531598 DIP2BQ9P265 1576 aa13.49□□□□□ -0.25
NPIPA3-202ENST00000531598 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
NPIPA3-202ENST00000531598 EFCAB6Q5THR3 1501 aa13.48□□□□□ -0.25
NPIPA3-202ENST00000531598 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
NPIPA3-202ENST00000531598 PRAG1Q86YV5 1406 aa13.47□□□□□ -0.25
NPIPA3-202ENST00000531598 USP47Q96K76 1375 aa13.47□□□□□ -0.25
NPIPA3-202ENST00000531598 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
NPIPA3-202ENST00000531598 FAM69CQ0P6D2 419 aa13.47□□□□□ -0.25
NPIPA3-202ENST00000531598 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
NPIPA3-202ENST00000531598 CARD11Q9BXL7 1154 aa13.46□□□□□ -0.25
NPIPA3-202ENST00000531598 LAMC1P11047 1609 aa13.46□□□□□ -0.26
NPIPA3-202ENST00000531598 MROH1Q8NDA8 1641 aa13.46□□□□□ -0.26
NPIPA3-202ENST00000531598 CCDC7Q96M83 1385 aa13.45□□□□□ -0.26
NPIPA3-202ENST00000531598 E9PCH4 1651 aa13.45□□□□□ -0.26
NPIPA3-202ENST00000531598 CNTLNQ9NXG0 1405 aa13.44□□□□□ -0.26
NPIPA3-202ENST00000531598 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
NPIPA3-202ENST00000531598 SPHKAPQ2M3C7 1700 aa13.44□□□□□ -0.26
NPIPA3-202ENST00000531598 WASHC2AQ641Q2 1341 aa13.43□□□□□ -0.26
NPIPA3-202ENST00000531598 ARHGAP31Q2M1Z3 1444 aa13.43□□□□□ -0.26
NPIPA3-202ENST00000531598 FRMPD1Q5SYB0 1578 aa13.43□□□□□ -0.26
NPIPA3-202ENST00000531598 RICTORQ6R327 1708 aa13.43□□□□□ -0.26
NPIPA3-202ENST00000531598 DIP2CQ9Y2E4 1556 aa13.42□□□□□ -0.26
NPIPA3-202ENST00000531598 ZNF326Q5BKZ1 582 aaKnown RBP13.42□□□□□ -0.26
NPIPA3-202ENST00000531598 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
NPIPA3-202ENST00000531598 ABCA6Q8N139 1617 aa13.42□□□□□ -0.26
NPIPA3-202ENST00000531598 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
NPIPA3-202ENST00000531598 WASHC2CQ9Y4E1 1318 aa13.4□□□□□ -0.26
NPIPA3-202ENST00000531598 CEP152O94986 1710 aa13.4□□□□□ -0.26
NPIPA3-202ENST00000531598 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
NPIPA3-202ENST00000531598 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 ABCC3O15438 1527 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 AGLP35573 1532 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 RAPGEF3O95398 923 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 HIRIP3Q9BW71 556 aaPredicted RBP13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 MYOM2P54296 1465 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 TRPM1Q7Z4N2 1603 aa13.39□□□□□ -0.27
NPIPA3-202ENST00000531598 RGL3Q3MIN7 710 aa13.38□□□□□ -0.27
NPIPA3-202ENST00000531598 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
NPIPA3-202ENST00000531598 MAPK8IP2Q13387 824 aaPredicted RBP13.37□□□□□ -0.27
NPIPA3-202ENST00000531598 PPRC1Q5VV67 1664 aaKnown RBP13.37□□□□□ -0.27
NPIPA3-202ENST00000531598 CLTCL1P53675 1640 aa13.36□□□□□ -0.27
NPIPA3-202ENST00000531598 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
NPIPA3-202ENST00000531598 KTN1Q86UP2 1357 aaKnown RBP13.36□□□□□ -0.27
NPIPA3-202ENST00000531598 GGT6Q6P531 493 aa13.36□□□□□ -0.27
NPIPA3-202ENST00000531598 CDCA8Q53HL2 280 aa13.35□□□□□ -0.27
NPIPA3-202ENST00000531598 SLC52A1Q9NWF4 448 aa13.35□□□□□ -0.27
NPIPA3-202ENST00000531598 NPATQ14207 1427 aa13.35□□□□□ -0.27
NPIPA3-202ENST00000531598 KIAA1210Q9ULL0 1709 aa13.34□□□□□ -0.27
NPIPA3-202ENST00000531598 NOS1P29475 1434 aa13.34□□□□□ -0.27
NPIPA3-202ENST00000531598 ADGRB3O60242 1522 aa13.33□□□□□ -0.28
NPIPA3-202ENST00000531598 CAMSAP1Q5T5Y3 1602 aa13.32□□□□□ -0.28
NPIPA3-202ENST00000531598 MADDQ8WXG6 1647 aa13.32□□□□□ -0.28
NPIPA3-202ENST00000531598 YEATS2Q9ULM3 1422 aa13.32□□□□□ -0.28
NPIPA3-202ENST00000531598 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
NPIPA3-202ENST00000531598 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
NPIPA3-202ENST00000531598 TMF1P82094 1093 aa13.31□□□□□ -0.28
NPIPA3-202ENST00000531598 KIF1BO60333 1816 aa13.31□□□□□ -0.28
NPIPA3-202ENST00000531598 NRXN1Q9ULB1 1477 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms