RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 SPDYE16A6NNV3 312 aaPredicted RBP10.85□□□□□ -0.67
ATM-216ENST00000531525 BRPF1P55201 1214 aaPredicted RBP10.84□□□□□ -0.67
ATM-216ENST00000531525 PSDA5PKW4 1024 aaPredicted RBP10.82□□□□□ -0.68
ATM-216ENST00000531525 PTGER2P43116 358 aa10.82□□□□□ -0.68
ATM-216ENST00000531525 FOSBP53539 338 aa10.82□□□□□ -0.68
ATM-216ENST00000531525 ZNF687Q8N1G0 1237 aa10.81□□□□□ -0.68
ATM-216ENST00000531525 CDAN1Q8IWY9 1227 aa10.8□□□□□ -0.68
ATM-216ENST00000531525 ZNF454Q8N9F8 522 aa10.8□□□□□ -0.68
ATM-216ENST00000531525 JPH4Q96JJ6 628 aa10.8□□□□□ -0.68
ATM-216ENST00000531525 PCDHGA10Q9Y5H3 936 aa10.79□□□□□ -0.68
ATM-216ENST00000531525 HRCP23327 699 aa10.79□□□□□ -0.68
ATM-216ENST00000531525 PPP4R3BQ5MIZ7 849 aa10.78□□□□□ -0.68
ATM-216ENST00000531525 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
ATM-216ENST00000531525 DDX12PQ92771 950 aa10.78□□□□□ -0.68
ATM-216ENST00000531525 PHF14O94880 888 aa10.77□□□□□ -0.69
ATM-216ENST00000531525 NEUROD2Q15784 382 aa10.77□□□□□ -0.69
ATM-216ENST00000531525 LMOD2Q6P5Q4 547 aa10.76□□□□□ -0.69
ATM-216ENST00000531525 SEMA3EO15041 775 aa10.74□□□□□ -0.69
ATM-216ENST00000531525 ZDHHC16Q969W1 377 aa10.74□□□□□ -0.69
ATM-216ENST00000531525 KRTAP3-3Q9BYR6 98 aa10.74□□□□□ -0.69
ATM-216ENST00000531525 KRTAP3-2Q9BYR7 98 aa10.74□□□□□ -0.69
ATM-216ENST00000531525 MLLT3P42568 568 aaPredicted RBP10.74□□□□□ -0.69
ATM-216ENST00000531525 PCDH10Q9P2E7 1040 aa10.74□□□□□ -0.69
ATM-216ENST00000531525 GRXCR2A6NFK2 248 aa10.73□□□□□ -0.69
ATM-216ENST00000531525 ADAM33Q9BZ11 813 aa10.73□□□□□ -0.69
ATM-216ENST00000531525 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
ATM-216ENST00000531525 EPAS1Q99814 870 aa10.72□□□□□ -0.69
ATM-216ENST00000531525 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
ATM-216ENST00000531525 FBXW7Q969H0 707 aa10.71□□□□□ -0.69
ATM-216ENST00000531525 AXIN2Q9Y2T1 843 aa10.71□□□□□ -0.69
ATM-216ENST00000531525 OSBPP22059 807 aa10.7□□□□□ -0.7
ATM-216ENST00000531525 PBX2P40425 430 aa10.7□□□□□ -0.7
ATM-216ENST00000531525 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
ATM-216ENST00000531525 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATM-216ENST00000531525 ARHGAP33O14559 1287 aa10.68□□□□□ -0.7
ATM-216ENST00000531525 ARID3AQ99856 593 aa10.68□□□□□ -0.7
ATM-216ENST00000531525 TESPA1A2RU30 521 aaPredicted RBP10.68□□□□□ -0.7
ATM-216ENST00000531525 PSEN2P49810 448 aa10.68□□□□□ -0.7
ATM-216ENST00000531525 EN1Q05925 392 aaPredicted RBP10.68□□□□□ -0.7
ATM-216ENST00000531525 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
ATM-216ENST00000531525 KCNK17Q96T54 332 aa10.66□□□□□ -0.7
ATM-216ENST00000531525 PTPREP23469 700 aa10.65□□□□□ -0.7
ATM-216ENST00000531525 C6orf132Q5T0Z8 1188 aa10.64□□□□□ -0.71
ATM-216ENST00000531525 DMRTA1Q5VZB9 504 aa10.64□□□□□ -0.71
ATM-216ENST00000531525 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
ATM-216ENST00000531525 TSR1Q2NL82 804 aaKnown RBP10.63□□□□□ -0.71
ATM-216ENST00000531525 MAP3K7O43318 606 aa10.63□□□□□ -0.71
ATM-216ENST00000531525 ZMYND15Q9H091 742 aa10.63□□□□□ -0.71
ATM-216ENST00000531525 COL9A1P20849 921 aa10.61□□□□□ -0.71
ATM-216ENST00000531525 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
ATM-216ENST00000531525 PPP1R3GB7ZBB8 358 aa10.59□□□□□ -0.71
ATM-216ENST00000531525 RSPH6AQ9H0K4 717 aa10.59□□□□□ -0.71
ATM-216ENST00000531525 CDHR5Q9HBB8 845 aa10.59□□□□□ -0.71
ATM-216ENST00000531525 SLC24A3Q9HC58 644 aa10.59□□□□□ -0.71
ATM-216ENST00000531525 CUX2O14529 1486 aa10.59□□□□□ -0.71
ATM-216ENST00000531525 ANKRD13DQ6ZTN6 518 aa10.58□□□□□ -0.72
ATM-216ENST00000531525 SMYD5Q6GMV2 418 aa10.58□□□□□ -0.72
ATM-216ENST00000531525 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
ATM-216ENST00000531525 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
ATM-216ENST00000531525 ADGRD1Q6QNK2 874 aa10.56□□□□□ -0.72
ATM-216ENST00000531525 SLC4A5Q9BY07 1137 aa10.56□□□□□ -0.72
ATM-216ENST00000531525 TK2O00142 265 aa10.55□□□□□ -0.72
ATM-216ENST00000531525 ZC3H15Q8WU90 426 aaKnown RBP10.55□□□□□ -0.72
ATM-216ENST00000531525 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
ATM-216ENST00000531525 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
ATM-216ENST00000531525 SPNS2Q8IVW8 549 aa10.53□□□□□ -0.72
ATM-216ENST00000531525 PROX2Q3B8N5 592 aa10.53□□□□□ -0.72
ATM-216ENST00000531525 HRO43593 1189 aa10.52□□□□□ -0.73
ATM-216ENST00000531525 CCDC9Q9Y3X0 531 aaKnown RBP10.52□□□□□ -0.73
ATM-216ENST00000531525 CERKQ8TCT0 537 aa10.51□□□□□ -0.73
ATM-216ENST00000531525 ZBTB7CA1YPR0 619 aa10.5□□□□□ -0.73
ATM-216ENST00000531525 PTGDRQ13258 359 aa10.5□□□□□ -0.73
ATM-216ENST00000531525 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
ATM-216ENST00000531525 NUTM2FA1L443 756 aa10.49□□□□□ -0.73
ATM-216ENST00000531525 BHMG1C9JSJ3 638 aaPredicted RBP10.48□□□□□ -0.73
ATM-216ENST00000531525 TRIM6-TRIM34B2RNG4 842 aa10.48□□□□□ -0.73
ATM-216ENST00000531525 PRSS12P56730 875 aa10.48□□□□□ -0.73
ATM-216ENST00000531525 CDCA7LQ96GN5 454 aa10.48□□□□□ -0.73
ATM-216ENST00000531525 TSKSQ9UJT2 592 aa10.48□□□□□ -0.73
ATM-216ENST00000531525 GPR37O15354 613 aa10.47□□□□□ -0.73
ATM-216ENST00000531525 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
ATM-216ENST00000531525 FAM198AQ9UFP1 575 aa10.47□□□□□ -0.73
ATM-216ENST00000531525 RABGEF1Q9UJ41 708 aa10.47□□□□□ -0.73
ATM-216ENST00000531525 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
ATM-216ENST00000531525 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
ATM-216ENST00000531525 RBM27Q9P2N5 1060 aaKnown RBP10.45□□□□□ -0.74
ATM-216ENST00000531525 NCAPD3P42695 1498 aa10.45□□□□□ -0.74
ATM-216ENST00000531525 FCHSD2O94868 740 aa10.44□□□□□ -0.74
ATM-216ENST00000531525 PADI6Q6TGC4 694 aa10.44□□□□□ -0.74
ATM-216ENST00000531525 TTC13Q8NBP0 860 aa10.44□□□□□ -0.74
ATM-216ENST00000531525 GPIHBP1Q8IV16 184 aa10.43□□□□□ -0.74
ATM-216ENST00000531525 MMRN1Q13201 1228 aa10.43□□□□□ -0.74
ATM-216ENST00000531525 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
ATM-216ENST00000531525 HMGXB3Q12766 1538 aa10.42□□□□□ -0.74
ATM-216ENST00000531525 C3orf80F5H4A9 247 aa10.42□□□□□ -0.74
ATM-216ENST00000531525 ARID3CA6NKF2 412 aa10.41□□□□□ -0.74
ATM-216ENST00000531525 HIC1Q14526 733 aa10.41□□□□□ -0.74
ATM-216ENST00000531525 MYT1LQ9UL68 1186 aa10.41□□□□□ -0.74
ATM-216ENST00000531525 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
ATM-216ENST00000531525 NBPF3Q9H094 633 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms