RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 KDM5DQ9BY66 1539 aa19.35■□□□□ 0.69
C11orf54-210ENST00000531516 ANKRD30AQ9BXX3 1397 aa19.35■□□□□ 0.69
C11orf54-210ENST00000531516 KIF15Q9NS87 1388 aa19.35■□□□□ 0.69
C11orf54-210ENST00000531516 ABCC5O15440 1437 aa19.34■□□□□ 0.69
C11orf54-210ENST00000531516 DUOX2Q9NRD8 1548 aa19.34■□□□□ 0.69
C11orf54-210ENST00000531516 TCOF1Q13428 1488 aaKnown RBP19.34■□□□□ 0.69
C11orf54-210ENST00000531516 DAPK1P53355 1430 aa19.34■□□□□ 0.69
C11orf54-210ENST00000531516 FBXO41Q8TF61 875 aa19.32■□□□□ 0.68
C11orf54-210ENST00000531516 CHIC2Q9UKJ5 165 aa19.32■□□□□ 0.68
C11orf54-210ENST00000531516 TNRQ92752 1358 aa19.32■□□□□ 0.68
C11orf54-210ENST00000531516 KANK1Q14678 1352 aa19.31■□□□□ 0.68
C11orf54-210ENST00000531516 PZPP20742 1482 aa19.3■□□□□ 0.68
C11orf54-210ENST00000531516 PKD2Q13563 968 aa19.3■□□□□ 0.68
C11orf54-210ENST00000531516 ERBINQ96RT1 1412 aa19.3■□□□□ 0.68
C11orf54-210ENST00000531516 PTPRTO14522 1441 aa19.28■□□□□ 0.68
C11orf54-210ENST00000531516 FBXO31Q5XUX0 539 aaPredicted RBP19.28■□□□□ 0.68
C11orf54-210ENST00000531516 EIF2AK4Q9P2K8 1649 aaKnown RBP19.28■□□□□ 0.68
C11orf54-210ENST00000531516 NCOA1Q15788 1441 aa19.27■□□□□ 0.68
C11orf54-210ENST00000531516 DNMT1P26358 1616 aaKnown RBP19.27■□□□□ 0.68
C11orf54-210ENST00000531516 CERKQ8TCT0 537 aa19.27■□□□□ 0.68
C11orf54-210ENST00000531516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.27■□□□□ 0.68
C11orf54-210ENST00000531516 A2ML1A8K2U0 1454 aa19.25■□□□□ 0.67
C11orf54-210ENST00000531516 THEMISQ8N1K5 641 aaPredicted RBP19.25■□□□□ 0.67
C11orf54-210ENST00000531516 CAMSAP1Q5T5Y3 1602 aa19.25■□□□□ 0.67
C11orf54-210ENST00000531516 CEP170BQ9Y4F5 1589 aaPredicted RBP19.24■□□□□ 0.67
C11orf54-210ENST00000531516 PLA2R1Q13018 1463 aa19.24■□□□□ 0.67
C11orf54-210ENST00000531516 RNF17Q9BXT8 1623 aaKnown RBP19.24■□□□□ 0.67
C11orf54-210ENST00000531516 MYO3AQ8NEV4 1616 aa19.23■□□□□ 0.67
C11orf54-210ENST00000531516 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
C11orf54-210ENST00000531516 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
C11orf54-210ENST00000531516 ABCC3O15438 1527 aa19.22■□□□□ 0.67
C11orf54-210ENST00000531516 CROCC2H7BZ55 1655 aa19.21■□□□□ 0.67
C11orf54-210ENST00000531516 ZC3H13Q5T200 1668 aaKnown RBP19.21■□□□□ 0.67
C11orf54-210ENST00000531516 ANKLE2Q86XL3 938 aa19.2■□□□□ 0.66
C11orf54-210ENST00000531516 ZNF142P52746 1687 aaPredicted RBP19.19■□□□□ 0.66
C11orf54-210ENST00000531516 ADGRL2O95490 1459 aa19.18■□□□□ 0.66
C11orf54-210ENST00000531516 PPARGC1BQ86YN6 1023 aaKnown RBP19.18■□□□□ 0.66
C11orf54-210ENST00000531516 STRCQ7RTU9 1775 aa19.18■□□□□ 0.66
C11orf54-210ENST00000531516 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
C11orf54-210ENST00000531516 ITGAEP38570 1179 aa19.15■□□□□ 0.66
C11orf54-210ENST00000531516 STAG3Q9UJ98 1225 aa19.15■□□□□ 0.66
C11orf54-210ENST00000531516 ARHGAP31Q2M1Z3 1444 aa19.15■□□□□ 0.66
C11orf54-210ENST00000531516 ERVK-7P63135 1459 aa19.15■□□□□ 0.66
C11orf54-210ENST00000531516 PRDM15P57071 1507 aaPredicted RBP19.15■□□□□ 0.66
C11orf54-210ENST00000531516 UGGT1Q9NYU2 1555 aa19.14■□□□□ 0.65
C11orf54-210ENST00000531516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.13■□□□□ 0.65
C11orf54-210ENST00000531516 MROH1Q8NDA8 1641 aa19.11■□□□□ 0.65
C11orf54-210ENST00000531516 SPATA31D1Q6ZQQ2 1576 aa19.11■□□□□ 0.65
C11orf54-210ENST00000531516 ROCK1Q13464 1354 aa19.11■□□□□ 0.65
C11orf54-210ENST00000531516 EID1Q9Y6B2 187 aa19.09■□□□□ 0.65
C11orf54-210ENST00000531516 DEPDC5O75140 1603 aa19.07■□□□□ 0.64
C11orf54-210ENST00000531516 LMTK2Q8IWU2 1503 aa19.07■□□□□ 0.64
C11orf54-210ENST00000531516 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
C11orf54-210ENST00000531516 CEP152O94986 1710 aa19.06■□□□□ 0.64
C11orf54-210ENST00000531516 SLC52A1Q9NWF4 448 aa19.06■□□□□ 0.64
C11orf54-210ENST00000531516 IQSEC2Q5JU85 1478 aa19.04■□□□□ 0.64
C11orf54-210ENST00000531516 NPHP4O75161 1426 aaPredicted RBP19.04■□□□□ 0.64
C11orf54-210ENST00000531516 TXNDC2Q86VQ3 553 aa19.03■□□□□ 0.64
C11orf54-210ENST00000531516 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
C11orf54-210ENST00000531516 RPRD2Q5VT52 1461 aaKnown RBP19.01■□□□□ 0.63
C11orf54-210ENST00000531516 VWDEQ8N2E2 1590 aa19.01■□□□□ 0.63
C11orf54-210ENST00000531516 LTBP4Q8N2S1 1624 aa19■□□□□ 0.63
C11orf54-210ENST00000531516 IDI1Q13907 227 aa19■□□□□ 0.63
C11orf54-210ENST00000531516 MED14O60244 1454 aa19■□□□□ 0.63
C11orf54-210ENST00000531516 EFCAB6Q5THR3 1501 aa18.99■□□□□ 0.63
C11orf54-210ENST00000531516 RRBP1Q9P2E9 1410 aaKnown RBP18.99■□□□□ 0.63
C11orf54-210ENST00000531516 NUP155O75694 1391 aa18.98■□□□□ 0.63
C11orf54-210ENST00000531516 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
C11orf54-210ENST00000531516 UBAP1LF5GYI3 381 aa18.97■□□□□ 0.63
C11orf54-210ENST00000531516 NOS1P29475 1434 aa18.97■□□□□ 0.63
C11orf54-210ENST00000531516 POLR1AO95602 1720 aaPredicted RBP18.97■□□□□ 0.63
C11orf54-210ENST00000531516 TMEM2Q9UHN6 1383 aa18.96■□□□□ 0.63
C11orf54-210ENST00000531516 CPS1P31327 1500 aa18.96■□□□□ 0.63
C11orf54-210ENST00000531516 BCANQ96GW7 911 aa18.95■□□□□ 0.62
C11orf54-210ENST00000531516 NEURL4Q96JN8 1562 aa18.94■□□□□ 0.62
C11orf54-210ENST00000531516 TOM1O60784 492 aa18.93■□□□□ 0.62
C11orf54-210ENST00000531516 CHGAP10645 457 aaKnown RBP18.93■□□□□ 0.62
C11orf54-210ENST00000531516 LTKP29376 864 aa18.93■□□□□ 0.62
C11orf54-210ENST00000531516 SLIT1O75093 1534 aa18.93■□□□□ 0.62
C11orf54-210ENST00000531516 CFAP65Q6ZU64 1925 aaKnown RBP18.92■□□□□ 0.62
C11orf54-210ENST00000531516 ARHGAP23Q9P227 1491 aa18.92■□□□□ 0.62
C11orf54-210ENST00000531516 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
C11orf54-210ENST00000531516 UNC13BO14795 1591 aa18.92■□□□□ 0.62
C11orf54-210ENST00000531516 TET3O43151 1660 aa18.92■□□□□ 0.62
C11orf54-210ENST00000531516 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
C11orf54-210ENST00000531516 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
C11orf54-210ENST00000531516 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.9■□□□□ 0.62
C11orf54-210ENST00000531516 PIK3C2BO00750 1634 aa18.89■□□□□ 0.62
C11orf54-210ENST00000531516 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
C11orf54-210ENST00000531516 SYNMO15061 1565 aa18.87■□□□□ 0.61
C11orf54-210ENST00000531516 ADGRB3O60242 1522 aa18.87■□□□□ 0.61
C11orf54-210ENST00000531516 KDM5AP29375 1690 aaKnown RBP18.87■□□□□ 0.61
C11orf54-210ENST00000531516 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
C11orf54-210ENST00000531516 IQGAP3Q86VI3 1631 aa18.85■□□□□ 0.61
C11orf54-210ENST00000531516 GCC2Q8IWJ2 1684 aa18.85■□□□□ 0.61
C11orf54-210ENST00000531516 NAIPQ13075 1403 aa18.83■□□□□ 0.61
C11orf54-210ENST00000531516 PIP4K2BP78356 416 aa18.82■□□□□ 0.6
C11orf54-210ENST00000531516 SLC26A8Q96RN1 970 aa18.82■□□□□ 0.6
C11orf54-210ENST00000531516 HFM1A2PYH4 1435 aa18.82■□□□□ 0.6
C11orf54-210ENST00000531516 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms