RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 ZNF335Q9H4Z2 1342 aaPredicted RBP29.38■■■□□ 2.29
SSSCA1-206ENST00000531405 POLR1AO95602 1720 aaPredicted RBP29.37■■■□□ 2.29
SSSCA1-206ENST00000531405 LRRC9Q6ZRR7 1453 aa29.37■■■□□ 2.29
SSSCA1-206ENST00000531405 PKD2Q13563 968 aa29.35■■■□□ 2.29
SSSCA1-206ENST00000531405 RSPH4AQ5TD94 716 aa29.34■■■□□ 2.29
SSSCA1-206ENST00000531405 FBXO31Q5XUX0 539 aaPredicted RBP29.34■■■□□ 2.29
SSSCA1-206ENST00000531405 PZPP20742 1482 aa29.33■■■□□ 2.29
SSSCA1-206ENST00000531405 FAM135AQ9P2D6 1515 aa29.33■■■□□ 2.29
SSSCA1-206ENST00000531405 TNRQ92752 1358 aa29.31■■■□□ 2.28
SSSCA1-206ENST00000531405 WASHC2CQ9Y4E1 1318 aa29.29■■■□□ 2.28
SSSCA1-206ENST00000531405 DISP3Q9P2K9 1392 aa29.28■■■□□ 2.28
SSSCA1-206ENST00000531405 MAST1Q9Y2H9 1570 aa29.28■■■□□ 2.28
SSSCA1-206ENST00000531405 RNF17Q9BXT8 1623 aaKnown RBP29.27■■■□□ 2.28
SSSCA1-206ENST00000531405 NEURL4Q96JN8 1562 aa29.27■■■□□ 2.28
SSSCA1-206ENST00000531405 TSPY4P0CV99 314 aa29.27■■■□□ 2.28
SSSCA1-206ENST00000531405 TSPY10P0CW01 314 aa29.27■■■□□ 2.28
SSSCA1-206ENST00000531405 KANK4Q5T7N3 995 aaPredicted RBP29.26■■■□□ 2.27
SSSCA1-206ENST00000531405 CFAP65Q6ZU64 1925 aaKnown RBP29.24■■■□□ 2.27
SSSCA1-206ENST00000531405 SPATA31D1Q6ZQQ2 1576 aa29.24■■■□□ 2.27
SSSCA1-206ENST00000531405 MAP3K1Q13233 1512 aa29.23■■■□□ 2.27
SSSCA1-206ENST00000531405 ZC3H13Q5T200 1668 aaKnown RBP29.22■■■□□ 2.27
SSSCA1-206ENST00000531405 EIF2AK4Q9P2K8 1649 aaKnown RBP29.21■■■□□ 2.27
SSSCA1-206ENST00000531405 CEP152O94986 1710 aa29.21■■■□□ 2.27
SSSCA1-206ENST00000531405 ABCC3O15438 1527 aa29.2■■■□□ 2.26
SSSCA1-206ENST00000531405 MYOM3Q5VTT5 1437 aa29.2■■■□□ 2.26
SSSCA1-206ENST00000531405 MIA2Q96PC5 1412 aa29.19■■■□□ 2.26
SSSCA1-206ENST00000531405 UBAP1LF5GYI3 381 aa29.18■■■□□ 2.26
SSSCA1-206ENST00000531405 ILDR2Q71H61 639 aa29.18■■■□□ 2.26
SSSCA1-206ENST00000531405 MROH1Q8NDA8 1641 aa29.18■■■□□ 2.26
SSSCA1-206ENST00000531405 UGGT1Q9NYU2 1555 aa29.18■■■□□ 2.26
SSSCA1-206ENST00000531405 NLRP1Q9C000 1473 aa29.17■■■□□ 2.26
SSSCA1-206ENST00000531405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.16■■■□□ 2.26
SSSCA1-206ENST00000531405 CROCC2H7BZ55 1655 aa29.15■■■□□ 2.26
SSSCA1-206ENST00000531405 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
SSSCA1-206ENST00000531405 SHANK2Q9UPX8 1470 aa29.1■■■□□ 2.25
SSSCA1-206ENST00000531405 VWDEQ8N2E2 1590 aa29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 IQGAP1P46940 1657 aa29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 ANKLE2Q86XL3 938 aa29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 THEMISQ8N1K5 641 aaPredicted RBP29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 CPS1P31327 1500 aa29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 DUOX2Q9NRD8 1548 aa29.09■■■□□ 2.25
SSSCA1-206ENST00000531405 ERVK-7P63135 1459 aa29.08■■■□□ 2.25
SSSCA1-206ENST00000531405 PTPN23Q9H3S7 1636 aa29.08■■■□□ 2.25
SSSCA1-206ENST00000531405 NPHP4O75161 1426 aaPredicted RBP29.05■■■□□ 2.24
SSSCA1-206ENST00000531405 UBR1Q8IWV7 1749 aa29.05■■■□□ 2.24
SSSCA1-206ENST00000531405 MED14O60244 1454 aa29.04■■■□□ 2.24
SSSCA1-206ENST00000531405 STRCP1A6NGW2 1772 aa29.03■■■□□ 2.24
SSSCA1-206ENST00000531405 ABCC5O15440 1437 aa29.01■■■□□ 2.23
SSSCA1-206ENST00000531405 KIF15Q9NS87 1388 aa29.01■■■□□ 2.23
SSSCA1-206ENST00000531405 PRDM15P57071 1507 aaPredicted RBP29■■■□□ 2.23
SSSCA1-206ENST00000531405 SCAF1Q9H7N4 1312 aaKnown RBP28.98■■■□□ 2.23
SSSCA1-206ENST00000531405 PIP4K2BP78356 416 aa28.97■■■□□ 2.23
SSSCA1-206ENST00000531405 RRP7BPQ9NSQ0 103 aa28.96■■■□□ 2.23
SSSCA1-206ENST00000531405 DAPK1P53355 1430 aa28.95■■■□□ 2.23
SSSCA1-206ENST00000531405 ERBINQ96RT1 1412 aa28.95■■■□□ 2.23
SSSCA1-206ENST00000531405 APLP2Q06481 763 aa28.95■■■□□ 2.22
SSSCA1-206ENST00000531405 SOCS7O14512 581 aa28.94■■■□□ 2.22
SSSCA1-206ENST00000531405 FGD6Q6ZV73 1430 aa28.93■■■□□ 2.22
SSSCA1-206ENST00000531405 ALKQ9UM73 1620 aa28.92■■■□□ 2.22
SSSCA1-206ENST00000531405 TOM1O60784 492 aa28.91■■■□□ 2.22
SSSCA1-206ENST00000531405 HSPA1LP34931 641 aa28.9■■■□□ 2.22
SSSCA1-206ENST00000531405 PIK3C2BO00750 1634 aa28.9■■■□□ 2.22
SSSCA1-206ENST00000531405 ARHGAP31Q2M1Z3 1444 aa28.89■■■□□ 2.22
SSSCA1-206ENST00000531405 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.89■■■□□ 2.22
SSSCA1-206ENST00000531405 SYNMO15061 1565 aa28.88■■■□□ 2.21
SSSCA1-206ENST00000531405 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
SSSCA1-206ENST00000531405 LRRC7Q96NW7 1537 aa28.85■■■□□ 2.21
SSSCA1-206ENST00000531405 CHIC2Q9UKJ5 165 aa28.85■■■□□ 2.21
SSSCA1-206ENST00000531405 ARHGAP23Q9P227 1491 aa28.85■■■□□ 2.21
SSSCA1-206ENST00000531405 SLIT1O75093 1534 aa28.84■■■□□ 2.21
SSSCA1-206ENST00000531405 MED1Q15648 1581 aaPredicted RBP28.83■■■□□ 2.21
SSSCA1-206ENST00000531405 XIRP1Q702N8 1843 aaKnown RBP28.83■■■□□ 2.21
SSSCA1-206ENST00000531405 LTKP29376 864 aa28.82■■■□□ 2.2
SSSCA1-206ENST00000531405 KANK1Q14678 1352 aa28.8■■■□□ 2.2
SSSCA1-206ENST00000531405 ANKRD30AQ9BXX3 1397 aa28.8■■■□□ 2.2
SSSCA1-206ENST00000531405 TXNDC2Q86VQ3 553 aa28.78■■■□□ 2.2
SSSCA1-206ENST00000531405 LMTK2Q8IWU2 1503 aa28.78■■■□□ 2.2
SSSCA1-206ENST00000531405 KDM5AP29375 1690 aaKnown RBP28.77■■■□□ 2.2
SSSCA1-206ENST00000531405 EFCAB6Q5THR3 1501 aa28.74■■■□□ 2.19
SSSCA1-206ENST00000531405 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
SSSCA1-206ENST00000531405 TMEM2Q9UHN6 1383 aa28.72■■■□□ 2.19
SSSCA1-206ENST00000531405 ADGRL2O95490 1459 aa28.72■■■□□ 2.19
SSSCA1-206ENST00000531405 EID1Q9Y6B2 187 aa28.71■■■□□ 2.19
SSSCA1-206ENST00000531405 STAG3Q9UJ98 1225 aa28.7■■■□□ 2.18
SSSCA1-206ENST00000531405 MYO5BQ9ULV0 1848 aa28.7■■■□□ 2.18
SSSCA1-206ENST00000531405 IDI1Q13907 227 aa28.68■■■□□ 2.18
SSSCA1-206ENST00000531405 FAM50AQ14320 339 aaKnown RBP28.68■■■□□ 2.18
SSSCA1-206ENST00000531405 ADGRB3O60242 1522 aa28.66■■■□□ 2.18
SSSCA1-206ENST00000531405 NOS1P29475 1434 aa28.66■■■□□ 2.18
SSSCA1-206ENST00000531405 TET3O43151 1660 aa28.62■■■□□ 2.17
SSSCA1-206ENST00000531405 GCC2Q8IWJ2 1684 aa28.61■■■□□ 2.17
SSSCA1-206ENST00000531405 ANKRD50Q9ULJ7 1429 aa28.6■■■□□ 2.17
SSSCA1-206ENST00000531405 SLC26A8Q96RN1 970 aa28.57■■■□□ 2.16
SSSCA1-206ENST00000531405 UNC13BO14795 1591 aa28.55■■■□□ 2.16
SSSCA1-206ENST00000531405 RPRD2Q5VT52 1461 aaKnown RBP28.55■■■□□ 2.16
SSSCA1-206ENST00000531405 PHF23Q9BUL5 403 aaPredicted RBP28.53■■■□□ 2.16
SSSCA1-206ENST00000531405 TMEM94Q12767 1356 aa28.52■■■□□ 2.16
SSSCA1-206ENST00000531405 SLC52A1Q9NWF4 448 aa28.52■■■□□ 2.16
SSSCA1-206ENST00000531405 NWD1Q149M9 1564 aa28.52■■■□□ 2.16
SSSCA1-206ENST00000531405 E9PCH4 1651 aa28.51■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms