RNA–Protein interactions for RNA: ENST00000531297.1

SOX6-214, Transcript of SRY-box 6, humanhuman

TSL 3

Gene SOX6, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-214ENST00000531297 CAMK2BQ13554 666 aa10.2□□□□□ -0.78
SOX6-214ENST00000531297 THSD4Q6ZMP0 1018 aa10.2□□□□□ -0.78
SOX6-214ENST00000531297 CADPS2Q86UW7 1296 aa10.19□□□□□ -0.78
SOX6-214ENST00000531297 ANKK1Q8NFD2 765 aa10.19□□□□□ -0.78
SOX6-214ENST00000531297 LAPTM4BQ86VI4 370 aa10.18□□□□□ -0.78
SOX6-214ENST00000531297 ONECUT3O60422 494 aaPredicted RBP10.17□□□□□ -0.78
SOX6-214ENST00000531297 DPYSL4O14531 572 aa10.16□□□□□ -0.78
SOX6-214ENST00000531297 IFFO2Q5TF58 517 aa10.15□□□□□ -0.78
SOX6-214ENST00000531297 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
SOX6-214ENST00000531297 SPDYE16A6NNV3 312 aaPredicted RBP10.14□□□□□ -0.79
SOX6-214ENST00000531297 RGS20O76081 388 aa10.14□□□□□ -0.79
SOX6-214ENST00000531297 NYAP1Q6ZVC0 841 aa10.14□□□□□ -0.79
SOX6-214ENST00000531297 C6orf132Q5T0Z8 1188 aa10.12□□□□□ -0.79
SOX6-214ENST00000531297 PDIA6Q15084 440 aa10.09□□□□□ -0.79
SOX6-214ENST00000531297 PROX2Q3B8N5 592 aa10.09□□□□□ -0.79
SOX6-214ENST00000531297 COL9A1P20849 921 aa10.08□□□□□ -0.8
SOX6-214ENST00000531297 E2F4Q16254 413 aa10.08□□□□□ -0.8
SOX6-214ENST00000531297 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
SOX6-214ENST00000531297 TRIM6-TRIM34B2RNG4 842 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 MAP3K7O43318 606 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 NBR1Q14596 966 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 PACS2Q86VP3 889 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 CERKQ8TCT0 537 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 DDX12PQ92771 950 aa10.07□□□□□ -0.8
SOX6-214ENST00000531297 SOWAHBA6NEL2 793 aa10.06□□□□□ -0.8
SOX6-214ENST00000531297 FAM98CQ17RN3 349 aaKnown RBP10.06□□□□□ -0.8
SOX6-214ENST00000531297 RBM33Q96EV2 1170 aaKnown RBP10.06□□□□□ -0.8
SOX6-214ENST00000531297 ZFRQ96KR1 1074 aaKnown RBP10.06□□□□□ -0.8
SOX6-214ENST00000531297 EN1Q05925 392 aaPredicted RBP10.05□□□□□ -0.8
SOX6-214ENST00000531297 CFAP44Q96MT7 982 aa10.05□□□□□ -0.8
SOX6-214ENST00000531297 PAXIP1Q6ZW49 1069 aaPredicted RBP10.03□□□□□ -0.8
SOX6-214ENST00000531297 LRCH3Q96II8 777 aa10.03□□□□□ -0.8
SOX6-214ENST00000531297 A0A0G2JS52 829 aa10.02□□□□□ -0.81
SOX6-214ENST00000531297 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
SOX6-214ENST00000531297 ARIH1Q9Y4X5 557 aaPredicted RBP10.01□□□□□ -0.81
SOX6-214ENST00000531297 BCAMP50895 628 aa10□□□□□ -0.81
SOX6-214ENST00000531297 SEPT9Q9UHD8 586 aaPredicted RBP10□□□□□ -0.81
SOX6-214ENST00000531297 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
SOX6-214ENST00000531297 TSR3Q9UJK0 312 aaKnown RBP9.99□□□□□ -0.81
SOX6-214ENST00000531297 HDGFP51858 240 aaKnown RBP9.98□□□□□ -0.81
SOX6-214ENST00000531297 KCNC4Q03721 635 aa9.97□□□□□ -0.81
SOX6-214ENST00000531297 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
SOX6-214ENST00000531297 NBPF26B4DH59 902 aa9.96□□□□□ -0.82
SOX6-214ENST00000531297 GRXCR2A6NFK2 248 aa9.95□□□□□ -0.82
SOX6-214ENST00000531297 IRX2Q9BZI1 471 aaPredicted RBP9.95□□□□□ -0.82
SOX6-214ENST00000531297 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
SOX6-214ENST00000531297 HPS5Q9UPZ3 1129 aa9.95□□□□□ -0.82
SOX6-214ENST00000531297 SLC4A3P48751 1232 aa9.94□□□□□ -0.82
SOX6-214ENST00000531297 PRSS12P56730 875 aa9.94□□□□□ -0.82
SOX6-214ENST00000531297 TSR1Q2NL82 804 aaKnown RBP9.94□□□□□ -0.82
SOX6-214ENST00000531297 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
SOX6-214ENST00000531297 WBP1LQ9NX94 342 aa9.94□□□□□ -0.82
SOX6-214ENST00000531297 PPP4CP60510 307 aa9.93□□□□□ -0.82
SOX6-214ENST00000531297 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
SOX6-214ENST00000531297 TSKSQ9UJT2 592 aa9.91□□□□□ -0.82
SOX6-214ENST00000531297 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
SOX6-214ENST00000531297 TATDN2Q93075 761 aa9.87□□□□□ -0.83
SOX6-214ENST00000531297 SAMD7Q7Z3H4 446 aa9.85□□□□□ -0.83
SOX6-214ENST00000531297 OSBPP22059 807 aa9.84□□□□□ -0.83
SOX6-214ENST00000531297 RNF40O75150 1001 aa9.83□□□□□ -0.84
SOX6-214ENST00000531297 ARHGEF1Q92888 912 aaKnown RBP9.83□□□□□ -0.84
SOX6-214ENST00000531297 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
SOX6-214ENST00000531297 SMAPO00193 183 aa9.81□□□□□ -0.84
SOX6-214ENST00000531297 LAPTM4AQ15012 233 aa9.81□□□□□ -0.84
SOX6-214ENST00000531297 NUDT18Q6ZVK8 323 aa9.81□□□□□ -0.84
SOX6-214ENST00000531297 PRR14Q9BWN1 585 aa9.81□□□□□ -0.84
SOX6-214ENST00000531297 P3H3Q8IVL6 736 aa9.8□□□□□ -0.84
SOX6-214ENST00000531297 IL21Q9HBE4 155 aa9.8□□□□□ -0.84
SOX6-214ENST00000531297 GGCXP38435 758 aa9.77□□□□□ -0.85
SOX6-214ENST00000531297 CDHR5Q9HBB8 845 aa9.77□□□□□ -0.85
SOX6-214ENST00000531297 FAM198AQ9UFP1 575 aa9.76□□□□□ -0.85
SOX6-214ENST00000531297 PRIM1P49642 420 aaKnown RBP9.75□□□□□ -0.85
SOX6-214ENST00000531297 PADI6Q6TGC4 694 aa9.75□□□□□ -0.85
SOX6-214ENST00000531297 TJAP1Q5JTD0 557 aa9.74□□□□□ -0.85
SOX6-214ENST00000531297 TTC13Q8NBP0 860 aa9.74□□□□□ -0.85
SOX6-214ENST00000531297 MTRQ99707 1265 aa9.74□□□□□ -0.85
SOX6-214ENST00000531297 Q6ZNB5 142 aa9.72□□□□□ -0.85
SOX6-214ENST00000531297 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
SOX6-214ENST00000531297 SWT1Q5T5J6 900 aaKnown RBP9.71□□□□□ -0.86
SOX6-214ENST00000531297 NPDC1Q9NQX5 325 aaPredicted RBP9.7□□□□□ -0.86
SOX6-214ENST00000531297 DNAJB2P25686 324 aa9.69□□□□□ -0.86
SOX6-214ENST00000531297 KCNV2Q8TDN2 545 aa9.69□□□□□ -0.86
SOX6-214ENST00000531297 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
SOX6-214ENST00000531297 V9GY48 417 aaPredicted RBP9.69□□□□□ -0.86
SOX6-214ENST00000531297 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.68□□□□□ -0.86
SOX6-214ENST00000531297 APLP1P51693 650 aa9.67□□□□□ -0.86
SOX6-214ENST00000531297 NUTM2FA1L443 756 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 PTGDRQ13258 359 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 KMT5BQ4FZB7 885 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 PPP1R18Q6NYC8 613 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 EYA1Q99502 592 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 PRKD2Q9BZL6 878 aa9.66□□□□□ -0.86
SOX6-214ENST00000531297 C3orf80F5H4A9 247 aa9.65□□□□□ -0.86
SOX6-214ENST00000531297 FCHSD2O94868 740 aa9.65□□□□□ -0.86
SOX6-214ENST00000531297 RSPH4AQ5TD94 716 aa9.65□□□□□ -0.86
SOX6-214ENST00000531297 SMYD5Q6GMV2 418 aa9.65□□□□□ -0.86
SOX6-214ENST00000531297 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
SOX6-214ENST00000531297 MLLT3P42568 568 aaPredicted RBP9.64□□□□□ -0.87
SOX6-214ENST00000531297 GFRA3O60609 400 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms