RNA–Protein interactions for RNA: ENST00000531143.6

PPM1A-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1A, humanhuman

TSL 1 (best)

Gene PPM1A, Length 1,546 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1A-206ENST00000531143 NPHP4O75161 1426 aaPredicted RBP12.26□□□□□ -0.45
PPM1A-206ENST00000531143 STRCP1A6NGW2 1772 aa12.26□□□□□ -0.45
PPM1A-206ENST00000531143 RBM33Q96EV2 1170 aaKnown RBP12.26□□□□□ -0.45
PPM1A-206ENST00000531143 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
PPM1A-206ENST00000531143 ZNF772Q68DY9 489 aaPredicted RBP12.25□□□□□ -0.45
PPM1A-206ENST00000531143 ANKLE2Q86XL3 938 aa12.25□□□□□ -0.45
PPM1A-206ENST00000531143 MED14O60244 1454 aa12.24□□□□□ -0.45
PPM1A-206ENST00000531143 RXRBP28702 533 aa12.24□□□□□ -0.45
PPM1A-206ENST00000531143 SYNMO15061 1565 aa12.24□□□□□ -0.45
PPM1A-206ENST00000531143 CDK12Q9NYV4 1490 aaPredicted RBP12.24□□□□□ -0.45
PPM1A-206ENST00000531143 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.23□□□□□ -0.451e-6■□□□□ 8.8
PPM1A-206ENST00000531143 HRCP23327 699 aa12.22□□□□□ -0.45
PPM1A-206ENST00000531143 LRP6O75581 1613 aa12.22□□□□□ -0.45
PPM1A-206ENST00000531143 JCADQ9P266 1359 aa12.19□□□□□ -0.46
PPM1A-206ENST00000531143 SAMD9Q5K651 1589 aa12.19□□□□□ -0.46
PPM1A-206ENST00000531143 CLTCQ00610 1675 aaKnown RBP12.19□□□□□ -0.46
PPM1A-206ENST00000531143 ABCC1P33527 1531 aa12.18□□□□□ -0.46
PPM1A-206ENST00000531143 CDK13Q14004 1512 aaKnown RBP12.18□□□□□ -0.46
PPM1A-206ENST00000531143 RGS12O14924 1447 aa12.16□□□□□ -0.46
PPM1A-206ENST00000531143 DEPDC5O75140 1603 aa12.16□□□□□ -0.46
PPM1A-206ENST00000531143 MEX3CQ5U5Q3 659 aaKnown RBP12.16□□□□□ -0.46
PPM1A-206ENST00000531143 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
PPM1A-206ENST00000531143 ROBO1Q9Y6N7 1651 aa12.16□□□□□ -0.46
PPM1A-206ENST00000531143 KIDINS220Q9ULH0 1771 aa12.15□□□□□ -0.46
PPM1A-206ENST00000531143 TNRQ92752 1358 aa12.15□□□□□ -0.46
PPM1A-206ENST00000531143 IQGAP1P46940 1657 aa12.14□□□□□ -0.47
PPM1A-206ENST00000531143 ABCB7O75027 752 aa12.14□□□□□ -0.47
PPM1A-206ENST00000531143 FBXO31Q5XUX0 539 aaPredicted RBP12.14□□□□□ -0.47
PPM1A-206ENST00000531143 PELP1Q8IZL8 1130 aaKnown RBP12.14□□□□□ -0.47
PPM1A-206ENST00000531143 THEMISQ8N1K5 641 aaPredicted RBP12.14□□□□□ -0.47
PPM1A-206ENST00000531143 PRXQ9BXM0 1461 aa12.13□□□□□ -0.47
PPM1A-206ENST00000531143 MYO5CQ9NQX4 1742 aa12.13□□□□□ -0.47
PPM1A-206ENST00000531143 GGT6Q6P531 493 aa12.12□□□□□ -0.47
PPM1A-206ENST00000531143 SPATA31A6Q5VVP1 1343 aa12.12□□□□□ -0.47
PPM1A-206ENST00000531143 NUTM2BA6NNL0 878 aaPredicted RBP12.11□□□□□ -0.47
PPM1A-206ENST00000531143 NUTM2EB1AL46 878 aaPredicted RBP12.11□□□□□ -0.47
PPM1A-206ENST00000531143 NUTM2DQ5VT03 806 aaPredicted RBP12.11□□□□□ -0.47
PPM1A-206ENST00000531143 NUTM2AQ8IVF1 878 aaPredicted RBP12.11□□□□□ -0.47
PPM1A-206ENST00000531143 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
PPM1A-206ENST00000531143 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
PPM1A-206ENST00000531143 KDM5DQ9BY66 1539 aa12.09□□□□□ -0.47
PPM1A-206ENST00000531143 UGGT1Q9NYU2 1555 aa12.08□□□□□ -0.48
PPM1A-206ENST00000531143 FAM135AQ9P2D6 1515 aa12.08□□□□□ -0.48
PPM1A-206ENST00000531143 TMEM94Q12767 1356 aa12.08□□□□□ -0.48
PPM1A-206ENST00000531143 ATAD2Q6PL18 1390 aa12.08□□□□□ -0.48
PPM1A-206ENST00000531143 KIF14Q15058 1648 aa12.08□□□□□ -0.48
PPM1A-206ENST00000531143 CSRNP3Q8WYN3 585 aa12.07□□□□□ -0.48
PPM1A-206ENST00000531143 LRP5O75197 1615 aa12.07□□□□□ -0.48
PPM1A-206ENST00000531143 AFF2P51816 1311 aa12.07□□□□□ -0.48
PPM1A-206ENST00000531143 PLXNC1O60486 1568 aa12.07□□□□□ -0.48
PPM1A-206ENST00000531143 YY1P25490 414 aa12.06□□□□□ -0.48
PPM1A-206ENST00000531143 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
PPM1A-206ENST00000531143 COL16A1Q07092 1604 aaPredicted RBP12.06□□□□□ -0.48
PPM1A-206ENST00000531143 PHLPP1O60346 1717 aa12.06□□□□□ -0.48
PPM1A-206ENST00000531143 LRRC9Q6ZRR7 1453 aa12.05□□□□□ -0.48
PPM1A-206ENST00000531143 EP400Q96L91 3159 aa12.05□□□□□ -0.48
PPM1A-206ENST00000531143 MAP3K1Q13233 1512 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 EEA1Q15075 1411 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 MIA2Q96PC5 1412 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 ZC3H13Q5T200 1668 aaKnown RBP12.04□□□□□ -0.48
PPM1A-206ENST00000531143 SAMD9LQ8IVG5 1584 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 RBM6P78332 1123 aaKnown RBP12.04□□□□□ -0.48
PPM1A-206ENST00000531143 ATP7AQ04656 1500 aa12.04□□□□□ -0.48
PPM1A-206ENST00000531143 PZPP20742 1482 aa12.03□□□□□ -0.48
PPM1A-206ENST00000531143 A2MP01023 1474 aa12.03□□□□□ -0.48
PPM1A-206ENST00000531143 RANGAP1P46060 587 aaPredicted RBP12.02□□□□□ -0.48
PPM1A-206ENST00000531143 SLAIN2Q9P270 581 aa12.02□□□□□ -0.48
PPM1A-206ENST00000531143 POLA2Q14181 598 aa12.01□□□□□ -0.49
PPM1A-206ENST00000531143 QTRT2Q9H974 415 aaKnown RBP12.01□□□□□ -0.49
PPM1A-206ENST00000531143 SPAG9O60271 1321 aaKnown RBP12.01□□□□□ -0.49
PPM1A-206ENST00000531143 RBM42Q9BTD8 480 aaKnown RBP12.01□□□□□ -0.49
PPM1A-206ENST00000531143 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
PPM1A-206ENST00000531143 CDC42BPBQ9Y5S2 1711 aa11.99□□□□□ -0.49
PPM1A-206ENST00000531143 TROQ12816 1431 aaPredicted RBP11.98□□□□□ -0.49
PPM1A-206ENST00000531143 LTKP29376 864 aa11.98□□□□□ -0.49
PPM1A-206ENST00000531143 ZBTB12Q9Y330 459 aaPredicted RBP11.98□□□□□ -0.49
PPM1A-206ENST00000531143 SCAF11Q99590 1463 aaKnown RBP11.98□□□□□ -0.49
PPM1A-206ENST00000531143 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
PPM1A-206ENST00000531143 SENP3-EIF4A1A0A087X0R7 540 aa11.96□□□□□ -0.5
PPM1A-206ENST00000531143 PROSER2Q86WR7 435 aaPredicted RBP11.96□□□□□ -0.5
PPM1A-206ENST00000531143 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.5
PPM1A-206ENST00000531143 SHPRHQ149N8 1683 aa11.95□□□□□ -0.5
PPM1A-206ENST00000531143 ZBTB22O15209 634 aa11.94□□□□□ -0.5
PPM1A-206ENST00000531143 NHSL1Q5SYE7 1610 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 MSH6P52701 1360 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 KCNA6P17658 529 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 NGLY1Q96IV0 654 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 SYCP2Q9BX26 1530 aa11.93□□□□□ -0.5
PPM1A-206ENST00000531143 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
PPM1A-206ENST00000531143 C8orf37Q96NL8 207 aa11.92□□□□□ -0.5
PPM1A-206ENST00000531143 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
PPM1A-206ENST00000531143 INO80Q9ULG1 1556 aaPredicted RBP11.92□□□□□ -0.5
PPM1A-206ENST00000531143 PRDM15P57071 1507 aaPredicted RBP11.92□□□□□ -0.5
PPM1A-206ENST00000531143 CLIP1P30622 1438 aa11.92□□□□□ -0.5
PPM1A-206ENST00000531143 PSDA5PKW4 1024 aaPredicted RBP11.91□□□□□ -0.5
PPM1A-206ENST00000531143 DEFB132Q7Z7B7 95 aa11.91□□□□□ -0.5
PPM1A-206ENST00000531143 TXNDC2Q86VQ3 553 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms