RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 C6orf132Q5T0Z8 1188 aa12.46□□□□□ -0.41
CHEK1-211ENST00000531062 RBM26Q5T8P6 1007 aaKnown RBP12.46□□□□□ -0.41
CHEK1-211ENST00000531062 SPNS2Q8IVW8 549 aa12.46□□□□□ -0.41
CHEK1-211ENST00000531062 PBX2P40425 430 aa12.45□□□□□ -0.42
CHEK1-211ENST00000531062 LMOD2Q6P5Q4 547 aa12.44□□□□□ -0.42
CHEK1-211ENST00000531062 RBM33Q96EV2 1170 aaKnown RBP12.44□□□□□ -0.42
CHEK1-211ENST00000531062 MAP3K7O43318 606 aa12.43□□□□□ -0.42
CHEK1-211ENST00000531062 ARHGAP33O14559 1287 aa12.42□□□□□ -0.42
CHEK1-211ENST00000531062 TSR1Q2NL82 804 aaKnown RBP12.42□□□□□ -0.42
CHEK1-211ENST00000531062 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
CHEK1-211ENST00000531062 PTPREP23469 700 aa12.41□□□□□ -0.42
CHEK1-211ENST00000531062 NUTM2FA1L443 756 aa12.38□□□□□ -0.43
CHEK1-211ENST00000531062 GPR37O15354 613 aa12.38□□□□□ -0.43
CHEK1-211ENST00000531062 CDHR5Q9HBB8 845 aa12.38□□□□□ -0.43
CHEK1-211ENST00000531062 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
CHEK1-211ENST00000531062 COL9A1P20849 921 aa12.37□□□□□ -0.43
CHEK1-211ENST00000531062 PTGDRQ13258 359 aa12.37□□□□□ -0.43
CHEK1-211ENST00000531062 CERKQ8TCT0 537 aa12.37□□□□□ -0.43
CHEK1-211ENST00000531062 KCNK17Q96T54 332 aa12.37□□□□□ -0.43
CHEK1-211ENST00000531062 PSEN2P49810 448 aa12.36□□□□□ -0.43
CHEK1-211ENST00000531062 GPIHBP1Q8IV16 184 aa12.36□□□□□ -0.43
CHEK1-211ENST00000531062 KRTAP3-3Q9BYR6 98 aa12.36□□□□□ -0.43
CHEK1-211ENST00000531062 KRTAP3-2Q9BYR7 98 aa12.36□□□□□ -0.43
CHEK1-211ENST00000531062 AXIN2Q9Y2T1 843 aa12.36□□□□□ -0.43
CHEK1-211ENST00000531062 SLC4A5Q9BY07 1137 aa12.35□□□□□ -0.43
CHEK1-211ENST00000531062 FCHSD2O94868 740 aa12.33□□□□□ -0.44
CHEK1-211ENST00000531062 DMRTA1Q5VZB9 504 aa12.33□□□□□ -0.44
CHEK1-211ENST00000531062 KCNH8Q96L42 1107 aa12.33□□□□□ -0.44
CHEK1-211ENST00000531062 ZBED2Q9BTP6 218 aa12.33□□□□□ -0.44
CHEK1-211ENST00000531062 LSM11P83369 360 aaKnown RBP eCLIP12.31□□□□□ -0.44
CHEK1-211ENST00000531062 HIC1Q14526 733 aa12.31□□□□□ -0.44
CHEK1-211ENST00000531062 TPRNQ4KMQ1 711 aa12.31□□□□□ -0.44
CHEK1-211ENST00000531062 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
CHEK1-211ENST00000531062 ONECUT3O60422 494 aaPredicted RBP12.3□□□□□ -0.44
CHEK1-211ENST00000531062 TTC13Q8NBP0 860 aa12.3□□□□□ -0.44
CHEK1-211ENST00000531062 ZC3H15Q8WU90 426 aaKnown RBP12.3□□□□□ -0.44
CHEK1-211ENST00000531062 TK2O00142 265 aa12.29□□□□□ -0.44
CHEK1-211ENST00000531062 PRSS12P56730 875 aa12.29□□□□□ -0.44
CHEK1-211ENST00000531062 GNPATO15228 680 aa12.27□□□□□ -0.45
CHEK1-211ENST00000531062 CDCA7LQ96GN5 454 aa12.27□□□□□ -0.45
CHEK1-211ENST00000531062 ZMYND10O75800 440 aa12.26□□□□□ -0.45
CHEK1-211ENST00000531062 VPS9D1Q9Y2B5 631 aa12.26□□□□□ -0.45
CHEK1-211ENST00000531062 TRIM6-TRIM34B2RNG4 842 aa12.25□□□□□ -0.45
CHEK1-211ENST00000531062 FAM198AQ9UFP1 575 aa12.25□□□□□ -0.45
CHEK1-211ENST00000531062 PROX2Q3B8N5 592 aa12.24□□□□□ -0.45
CHEK1-211ENST00000531062 TSKSQ9UJT2 592 aa12.24□□□□□ -0.45
CHEK1-211ENST00000531062 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
CHEK1-211ENST00000531062 FECHP22830 423 aa12.22□□□□□ -0.45
CHEK1-211ENST00000531062 ADGRD1Q6QNK2 874 aa12.22□□□□□ -0.45
CHEK1-211ENST00000531062 BHMG1C9JSJ3 638 aaPredicted RBP12.21□□□□□ -0.45
CHEK1-211ENST00000531062 HRO43593 1189 aa12.21□□□□□ -0.45
CHEK1-211ENST00000531062 PADI6Q6TGC4 694 aa12.21□□□□□ -0.45
CHEK1-211ENST00000531062 RABGEF1Q9UJ41 708 aa12.21□□□□□ -0.45
CHEK1-211ENST00000531062 KRI1Q8N9T8 703 aaKnown RBP12.2□□□□□ -0.46
CHEK1-211ENST00000531062 PRKCSHP14314 528 aaPredicted RBP12.19□□□□□ -0.46
CHEK1-211ENST00000531062 ANKRD13DQ6ZTN6 518 aa12.19□□□□□ -0.46
CHEK1-211ENST00000531062 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
CHEK1-211ENST00000531062 PACS2Q86VP3 889 aa12.18□□□□□ -0.46
CHEK1-211ENST00000531062 MAP2K5Q13163 448 aa12.17□□□□□ -0.46
CHEK1-211ENST00000531062 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
CHEK1-211ENST00000531062 C3orf80F5H4A9 247 aa12.16□□□□□ -0.46
CHEK1-211ENST00000531062 ADGRG1Q9Y653 693 aa12.16□□□□□ -0.46
CHEK1-211ENST00000531062 IRF6O14896 467 aa12.14□□□□□ -0.47
CHEK1-211ENST00000531062 TATDN2Q93075 761 aa12.14□□□□□ -0.47
CHEK1-211ENST00000531062 EYA1Q99502 592 aa12.13□□□□□ -0.47
CHEK1-211ENST00000531062 NBPF26B4DH59 902 aa12.11□□□□□ -0.47
CHEK1-211ENST00000531062 OATP04181 439 aa12.11□□□□□ -0.47
CHEK1-211ENST00000531062 LAPTM4BQ86VI4 370 aa12.11□□□□□ -0.47
CHEK1-211ENST00000531062 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
CHEK1-211ENST00000531062 NUDT18Q6ZVK8 323 aa12.1□□□□□ -0.47
CHEK1-211ENST00000531062 FAM161AQ3B820 660 aa12.09□□□□□ -0.47
CHEK1-211ENST00000531062 PXYLP1Q8TE99 480 aa12.09□□□□□ -0.47
CHEK1-211ENST00000531062 PNMA3Q9UL41 463 aa12.09□□□□□ -0.47
CHEK1-211ENST00000531062 METTL3Q86U44 580 aaKnown RBP12.08□□□□□ -0.48
CHEK1-211ENST00000531062 RBM46Q8TBY0 533 aaKnown RBP12.08□□□□□ -0.48
CHEK1-211ENST00000531062 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
CHEK1-211ENST00000531062 CCDC102AQ96A19 550 aa12.07□□□□□ -0.48
CHEK1-211ENST00000531062 SLC24A3Q9HC58 644 aa12.07□□□□□ -0.48
CHEK1-211ENST00000531062 SMAPO00193 183 aa12.06□□□□□ -0.48
CHEK1-211ENST00000531062 MRPL50Q8N5N7 158 aaKnown RBP12.06□□□□□ -0.48
CHEK1-211ENST00000531062 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
CHEK1-211ENST00000531062 AK7Q96M32 723 aa12.05□□□□□ -0.48
CHEK1-211ENST00000531062 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
CHEK1-211ENST00000531062 PHOX2BQ99453 314 aa12.04□□□□□ -0.48
CHEK1-211ENST00000531062 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.01□□□□□ -0.49
CHEK1-211ENST00000531062 RCCD1A6NED2 376 aa12.01□□□□□ -0.49
CHEK1-211ENST00000531062 ZFRQ96KR1 1074 aaKnown RBP12.01□□□□□ -0.49
CHEK1-211ENST00000531062 TRIM66O15016 1216 aa12□□□□□ -0.49
CHEK1-211ENST00000531062 DNAJB2P25686 324 aa12□□□□□ -0.49
CHEK1-211ENST00000531062 AMHR2Q16671 573 aa11.99□□□□□ -0.49
CHEK1-211ENST00000531062 TMEM134Q9H6X4 195 aa11.99□□□□□ -0.49
CHEK1-211ENST00000531062 TMUB1Q9BVT8 246 aa11.97□□□□□ -0.49
CHEK1-211ENST00000531062 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
CHEK1-211ENST00000531062 GOLGA8CPA6NN73 597 aa11.95□□□□□ -0.5
CHEK1-211ENST00000531062 HDGFP51858 240 aaKnown RBP11.93□□□□□ -0.5
CHEK1-211ENST00000531062 SAMD7Q7Z3H4 446 aa11.93□□□□□ -0.5
CHEK1-211ENST00000531062 ANKK1Q8NFD2 765 aa11.93□□□□□ -0.5
CHEK1-211ENST00000531062 DAXXQ9UER7 740 aaPredicted RBP11.93□□□□□ -0.5
CHEK1-211ENST00000531062 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
CHEK1-211ENST00000531062 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms